XLOC_034248 (gene) - C. hemisphaerica

Overview
NameXLOC_034248
Unique NameXLOC_034248
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:53723..56665-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034248 ID=XLOC_034248|Name=XLOC_034248|organism=Clytia hemisphaerica|type=gene|length=2943bp|location=Sequence derived from alignment at scaffold_242:53723..56665- (Clytia hemisphaerica)
GTTTAATCTATAAAAACTGAAACCTAAGGAAGAAGGCTGCTGAAAAGTAA
AATTAAAATGGAGCATTCATCTTAAAGGTATATCGTACTTTTTAGTTTTT
TCTTCTTACTGTCTTTAATTCGTTGTCGTTGTCATGCCTGTGTACGCGAA
TTGAATGATACACGATGGCAATATTCTTATGATATTCTCAATTTTTTTTG
GCCATTTTCATCATGGAAAATCTTATAAATTGTATATATCTTATATAAAA
AAGCAATGTCATTTGGCTTTTTAGTTTGTGGTGTTCGCTTATTTTATAGT
TTTCCTTAAGTTATCCTACTCTCTTACTTATTTTCTCAAGAATAATAACA
GTTTTTTTATCCATGTTTGTGTTTTCCTTTATGTAGCAATTAATACACCA
ATATGATCCGTTGAATGCGAAAGGAGCTCGTCATCAAATCAAAAAAAGTG
GTATCCATGGAGATGAAACATTTCTTCCTGGTGAGTGCAATTACGGATCA
TTAAAAGATGATTTCATTTCTCATATTTTCTTTTATTGATTTATTGATCT
AAATTGGAAGACTTTTTGTTCAATATTTCTGCTGTACTTCCTAGCTGTTT
AGTTTTCCTTTTCAGTTTATATTTCCTCACATCTGATGTCAAAGAAGTTC
CCCCTTCCTACCCTAGTCCTGCTGAAATAAGGCATACACGTTATTTTTAA
GAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAACCTAAGAA
ACATCTAAGAAACATGCTGAGGCTGAGAATGAGAAAATAATACTTTTTAA
TTCGGTTTTTTAAGAACCAGCCAATCAAAACTGATTATGTCAAAAAGTTT
AGAAATATGTAAGAAACATTTAAGGCTCAAAAGGCCGATTCCTAGATAAA
CATTGATGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAGTGTAACCTTG
TCAGCAGCCAGGTAATGATACATGTCTTTCGTTATGACCTGGTAGAATCT
CAACACGTTTACATAAATGTCTAGGATGGACAATTATGACCTGAAAGGAT
GTGTTGGTTTTTAATGCATTCTTTCTTGTACGTGTCTACGAGATTAATGT
CTCATATCATCTTTATATCGTTGTGGTAAAATTTCAAAGAATCATGAGCT
TTCTTAAAATTCAAACTATTCATTGCAGTACAGCTTATACATCTTTATGA
TGCTATTTTCAGGCTAGAGACAAATCCTTTAGTGCATAGGCTGGTGTTGG
TTAGAGATTATTACATAAAATGTAAAAGTTCCAGTATTTTTACATTCTAT
ATTTTCATCTATCTTTCAAAAAAAAAATCTATATTTAGAGAATGTAAGTA
AAGATAAAACTAAAACAAAAAATGGAAAAACAAAGCCCGACTTTCGATCT
CACTTCATTTCTAACCACTGTTACATCAACCTTTCTCTATTGTTTATTTT
CTCAACCAATCAAAACATTTTGTTCATACTGCTTTTAACCAATCAAACAA
CATCAAAAACCGACCAACCAATCAAATTACAGTATAGCCTTCCACCTGCC
AATCATCTCCCATATGAAGGAAGTCTGTTGATCATGAAAGCTTTACTAGT
TATTACATCAGGCGAACTAGTAAAACACAGTATATAAGAAAGCTCAAATC
CCATCAATTTCATTCCAAAAGCTGACAAAAAACGGAATGTGTAAAAAATC
AAATTTGAAACAGTTTCAACAAGTTCATTTCAACCATGATTATCACAAAA
GAGAGTTTATTATCACATGATACCATTTACATTTTCGGCTACGGCTCGTT
GATATGGAAACCAGATATCGAATATACCAAGAGGTTCATTGCTTATCTTT
CAGGTCACGAGCGACGGTTTTGGCAAGGCAGTCCGCATCATCGTGGAAAT
GTACAGAAACCTGGACGTGTGTTGACTTTGAAACAAAGCCCAGGAGTAAG
TTTTGATGAGGTTGAATCTATTATCACGAGCTAATACACTGCAAAATAAT
AGATAAATCGTCTAGTTAATTACAAAATAGCGGGCTTGCTGCGAAGATAT
GGTCTTTTTTAGCCTACTCATATATAGAGTATGCAACTGACGTTCAAAGC
TAATCTTGTTTTTTCTCTATTATAACTTTCTCTTGAAATTTTAGGGGCGT
GTATGGGGCGTTGTATACGAAGTCAAAGGAAAGGACAAAATCAAAACAGC
ATGTGATCGTTTATACGTTCGAGAACAATCCATCGGATGTTATGATATGA
AAATGTTACCGGTTTACTCTAAAGATAGCGCTGCGTTCCATGGTAAACCT
ATACCAGCCATCATTTATTATGCAACGCCACACAATCCGAACTACACAGG
GGATGAAGGAGAAGAAAAAATTGCCAAAATTATCGCAACTTCACATGGGG
TATCTGGGCATAATATCGAGTATCTGTTCCGGCTTGTTGATTTTATGCGA
GAATCTCTACCGAATGAATCGGAACCACATTTATACACGTTGGATAGTTT
AGTAAGGACCAAAGTTGGACTTTGTTGTAAAACACCTCTGTCATGGCGTT
TATTGTTGCAATGTGATGATCGGTTCCGTAGAATTGTTGGCTCTGGGAAA
GAGAATGTCCGGCGTACTTTGAGTAGCGAGGACGAACAAAACAAGTCTTC
AATGGCCGTCTGTACTTAGAGACGTCTTTTGTTATATTTTTTATTGTACC
AAAAATATTTGGGGAGGGAGCTATTTTGACATTTGAGCAAGTTTAAAGCA
TGACCGTTTTGGCGGTTTTAAATCTAGCTAATTTTACTATGATGATTTCT
GAAAATGTCTTTACGAACCTTCACTCTACCATAAATTCTTAATCTTCAAC
TGTAGTAAATTTAATAATATTATTTAATATTTATTGAGTATTAATTTTCT
ATTTATCTTTTCTATATGCGCAGATTTCATAAATAAAAGTCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054310TCONS_00054310Clytia hemisphaericatranscript
TCONS_00054309TCONS_00054309Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
Botch-2 proteinTCONS_00054310-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:53723..56665 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7	6.53	2.65	1.31	1.59	1.23	14.38	13.96	10.15	20.22	4.7	7.41	2.68	1.31	8.01	2.4	27.59	3.71	2.12	4.23	9.02	12.94	10.54	17.28	7.02	8.16	4.3	4.23	6.09	6.65