XLOC_034254 (gene) - C. hemisphaerica

Overview
NameXLOC_034254
Unique NameXLOC_034254
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:223745..230454-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034254 ID=XLOC_034254|Name=XLOC_034254|organism=Clytia hemisphaerica|type=gene|length=6710bp|location=Sequence derived from alignment at scaffold_242:223745..230454- (Clytia hemisphaerica)
GATGCACACTTACAAAAGAGTATCTAATAATAGAGATAGAGAGGACTTAA ACAGTTAAACAAGATCACAAATTGAAGAAAGACAACTCAAAGGGTCAAAC TGTCAAAAACCTGAAAAACTCACATAACTTGATAAACTCGGCGTCTTCAG CCATAGTCGACTTTCGATTTCTTTCTTTTTTCGCGGAGGAATTTGGTGCC GAGTCAGCATTTCTTCGAAAAATCCTTGGACACGTTTACTAGAAAAAATA TTTCATAAAAGATCCGGAAAGATCATTCAGGTGAATTGACCTCGGAAATG AAAACAAACTCACTTTCGTTTTCAAGAATTCTGTGATATGAGAGGAGCTA GGAGGAGCTTTTCCTTATAAAATCACTGATAAATCATCACCTGAATCATC ATTTTCATTATAACATAAGTTTACTTTTAGATAATTGAATAAATCATTCA TGGCCTACCCAAGGTGAGCAAAGGATTTTTCATCCCAGTGTCCCAGAAAC TTTTAAAGTGAAATTGCTTTTCTGCTTTTGAGGACATGTTCATAAATGAT GAGTAAATATTGGCCTTTTGGAGACATTTGAAATGACTGTTACAATTTTA CTCATGATAAAAATGTAACAAAATTTCAGAGGTCCTAGCTGCTGCAGTGG TGAAGCTATATAGCTGAGCTTTCTTAAGATAATCTTGTATCAACAAGAGA CTTGATTAAATTGGAGCTATGAAGGTTTGTTTCAGGGTCAGTGAAATGAT AAAAAAGTAACAAGCAAGAAATAAATAAGATGATAAAAATGGCCATAACT CATGAAATATGTATTGTAAAGATGTGAAAATGTTACACAACACAGGTTAT ACATACACGGACCTTCATTTTGAGTTTCATACATCAATGGCTGCTCATCT GATAAAAAAGTAACATTTTAAATCCTTGAAATTGATACTTTTAAGAGACC TTGAACCAAACAAAATCCAAGTAAAATTATTTTTCTTTTGTGGTTTATTG AACAAAATAGGTTGGAATTGCGCTTTATATATTTTTTTAAATTGTAGAAG GCCTAAGAAGGGTAATTTTGTAACATGAAATTCAACTCTTTCATAATATT GAAGGAAAGTAACATACTAAAGCACTAGTTTTCATGTTAATAAGTCAACA GTATTGGGTCATTAAGTGGTAATAAAGTAACAAAATTGCTATTTTTTCGC AATTTTTCCCAGTTTTGTTACAAATTTATCATGTTTTATCAACTTTTAAA TAGGCATTGGATTGTTTTAACTAGCCATAGGGTCAATGAATGGAAATAGT GACCCTTCATGTCCTCAAAAGAGTCTCAATTTGATAAATATGTAACAGGA ATTCAAGAGTACAAACAAACATAAGTCTAAACTTGTAGTATAGACACCCT GTTTGTTACAGATTTACCATTTAAAAACAGACAAAGAAAACATGACAATA CAAAAGACATGATATTGGTCTTAGGGTCAATTTAGATTAAAGAAATAGCC TTCTCGTCACCAGTTAATTTTTTTAATGGTCTTTCAACAACAAGTGCACG CCTTGTCCGGTACTAAACAAGTTTGTGGTGTTACTTTTTTACCCAAATGC AGCGTTTTTGGAAATTAAAGACATATTGTTAAAGGTCATAAGCCTCGTTA ATATTTCCCCCAAAGGAGGGCCTTTTTTGGTGAGATTGACATGATTAAAG TGACTTTAGGTACTATTTTTGCTATTTGCTAATACTGTTACTATTTTATC TTTTTCTTAGCCGTAGACCCTGTTACACTATTGCCCTTTATTGATTTTTT ATTTTCTTATGGATAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGAATCTCAAAATT GATTTGTTACAAAATTATCCACTTTTTGCTGATTTTTGCCATTTTTCAAA TGTCTCCATTTTACTCACCATTTATGAACATGTCCTTGAACTCTTTAATT ATGAACTAATGAATTGATTATTTTGCATTAGAAAGAGGAAGGATAAACTT AAGCTATGAGGGGTTGTTTGTCAAATTTGGTTAACTACATCAAAAGTTAT GGCTTTAATGCTAAAATATTACTTTTCAAATAAGTTGAAAAAAAGGCAAA AAATGGGGGCATATAACTGTCGATTGTGTACCGTGAGATCGGGTAAAACT TGTATCAGTGGAGGCTAACATGCATAACCCTCAAATAAATGACCTGGCTG GTCATTAAAATACAAACTTAAATCAAAATTTACGGATTGCAAAATGTATG TATCTCTCCTCCCAATCATAAAAGTGATGTCATATCATGATGCATGCATA ATTATTGTTTGATATCATTATTGAATTTGAGATTGCATGTCCAGCAGCCA TTGACAAACATCTGAATTCCCACCAATATTGAAATTTATGATTGCGCATG ATTTTTATTATCCAATTAGGTATGCTGTTTTATTTACCCACAATTCTGTT GGCGAGTAACTCACCAAAAATATTTAAGCGCGGCTGTAAATATGAGATAA AAGGTAACTTTTCATGCAGTTAAGTTATGTGTACACACCTTTTTTCCGAT TTTTGTCAAAAAAATTTTTTTCAGTCAAAGTGGCCACGTGGAAGAAAAGT TACTGGATTTCATTTTGGTAAAATCTCGATCTTAAAATCTTTTTTTGATC CAGAGTTATAACCATTTAAATTTCAAAACAAAGTTCATCTTATGACAGTA TGATGGATTATTTACTCAAATAATTATCTCTTTCGGAAACATCAAAGACA AAAGAGAGAATTCAGCTGATGTTTATTCTCACCTCTATTGAATAGTAATA TTTTTGACACATTTCACTGATTACTCAAATAAACAGCAATCATCTCGTTA AAATTTCAAATTGATGTAGAAAAAAACGAAATTTTACCACACCAAAGTCA CCCATAGCATTTAGATATCGACTTCATTCTTTTTTTATGAGATTCCCAAA ATATCAAAATTAAAAAGTGTCTTAGGATTTTATTTCTAACTGAGTTGTTT TTCCTAAATTTACAGATAACTAAAAAAATCACATTTAAATTTACTTTTTT ATCGATATTTTCACAGAATTTAGGATTTAAAGAGTTAAAGTAAATCCCAA AAAAAATCCCAAGATACTTTTTTCGTTCAATCTATTGGGAACATAGTATC GAAATTATTTTTTCAAAATGGGGGACTTTAACTTTGAAGTAGGTAAGGTT AAAATTCTTAAGATTTTAATTATATCCTGCCCAATTTTTTAAAATTCAGC TGAAACTTTTACCATTAGAAAGAGAATATTATTGGCTTTCNTAATTATAT CCTGCCCAGTTTTTTAAATTCAGCTGAAACTTTTACCATTAGAAAGAGAA TATTATTGGCTTTCAGAAAATATATACTTTTGATATATAAAAATTTGCTG TTCTAAAGATATGATCAATTAAAGAGAATGTGTCAAGAAAGGTGAACACA TACCTTAACTAGATCTGATAACTGACCCCTCAAAATTTGACTTTATCCTT CCTCTTTCCAATGGAAAAAGATTTTGTTCTTGAAAGGCTCATAGAACTCG AGAAAAAGGAGGACTTTTTTTCTGGGACACCCTGTATAAAATACATTTCA CGACCATGTATGTTTTTATTCAACTTGATAATATAATTTCAAATTTGTGA TTTATTTCTTCAGTAGACTCAACTTTATGAATGATAAGTCTCTTGAAGAT ATTAAAATATAGGCTTAATCAGTGAGAAGTTCTACATATCATCAAAACAT CAAATAGAATTGAAATCCACTTTTATTGTTTATTGTTTTTAGGCATCCCT CTAGTCTTCCAACAGCACCGTCAGGTACAAACTCATTGCAAATTATTTTT CTTTACAACACTGTATAGACCTTTTGCTAATCAGAGGTCATGTTTATTAA TTGAAAACTCCGAGGTTAATACAGAAGAATCAGGGCAAAAGATTTTGAGG AAAGCTTTTCATTTCAGCACTTTTATTTGATAAAAATGAGATAATCAAAA GTTTATTCTTTAAAATGTTTTTAATTGGAGGAGCTACATTATAAAGGTTT CTCGTTTCTGGCACAAATTGCTATATACTCTATATTAAATCAATAACAAA GTCCGACATTTTAGTTTGGTTTTCGCTGTCATGAGGATGATGCTAAGGCT CTAAGCTGCTTAAAGAGTTTTTGTAGAAACTATAACATAATGTCAAAGTA TCTTAAATATCTTGATCTCTTTCGCTTTTATCAGTGATTTTAAAGGCATT TTCATCAAGCCCAATATCGCTTTAGATGATGATTATAGTGATTACAATGA TGACCATATGACCCCTCGCTATGGGGAATGGGTGCCACTCATTGCGAATT GGGAATTCCTTCTTTTTCAAGTAGGAATGTATATTGCTGTCCAGACACAG CTAGTTCTGTGCATGTGACACACAGATACCATGATGCATAGCGATGGCAC CACATACAACAATGTCTGGCATATCACCCACACTCTTGTATCAGAGTAGT GGTGCCCAATTCCGCTCACATGGTACGGGTTGACCCAGGCGAAGGTGTTT TCATTTACCAAGTGAACCTAAGTAGTGGAAATCGAACTCGGACCTCCCGG ATAGGAGTCAAGAGCGATGACCGCCGCACCACTATATCTCTTTAGAAACC CATGATAACGATATATTTCTCCCTATTCTTAGCTCCTGGTTATCCACCTG CCACAGTGCCACCTTACCCAACCGGCCAATCATCATATCCCTTAGCGCCT CATAACCCATATCCGCCTGGTCCAGGCTATCCTCCTGTGGCAGGTCCACC TCAACCATCAACCTACCCTCCAGGATACCCGCCACCAGTACAACAGCCTC CAGGCAGTGCATATCCGCCATCAAACCCTGGATACCCTGCTCCTGCTTCT GGAGCTTATCCGCCAGCAGGTGTACCTGGAGCTTATCCGCCAGCAGGTGC ACCTGGTGCTTATCCGCCAACACCAGCAGCTTACCCACAAGGACCTTCAC CTTATCCATCCAATCCACCACCACCGCAGGGTCAATACCCTGNCGCCAAC ACCAGCAGCTTACCCACAAGGACCTTCACCTTATCCATCCAATCCACCAC CACCACAGGGTCAATACCCTGGCTATCCACCACCCGCTCCTGGTTACGGA CAACCTGGATTTCCAGGAGCAATGCCACCGCCACATCATGGGAAACCACA TAAACATAAAAACAAAGGAGGTATGATGGGTTTAGCAACAGGGGCTGCAA CGGGTGCGATGGCATCTAGTGTTCTAGGTGGTAAAAAAGGAAAGAAAAAG AAAATTTTAGGTGGTTTAGCAGCTGGAGCTGTAGGCGCTTATGCTCTTCA TAAAGTTGGGAAAGGAATCGGTGGTGGTTGGAGTAGCAGTAGTAGTAGTG ATAGTGATTTTGATTTTTTCGATTGAGCTACAATCATGACAATAGTTTTC AAGTTTTTATTATGAATATCCGACAATACTCCCCGTGTAGATGTATTGGT GTATGGGGGCATATGACTTGGACTTGTTATTAACAATATAGATCAAATTA ACATTCTTGTTCTCGTCGAACGTCGATAAGATTTTATTTTGGTAGCATAC AGTAGAGAGATAGATGTCTTGTCATATCTTGTATATATCTTGGGAAAAGT AAAGCATCCGTTTCTTTAAAAACACAAATCATTGTACAGTATAATATTCA ATTACTTTACTACTTGATGTGATGTCTACTTTTAACTGATATCCAATTCA CTAAGTAGTATTTTCTGAATTTGTTTGAAGTAACCTTTTTGTTTTTAATT CAACAAACACACCCCCTTCTCACAGCCTAAATATCCTCCCTTGTGGAAAA TTATTCTCCAATCTTTCTCCCCACTGGAAATAACCAAATAAACCAAATCT CACTGCAAAACATTTATTATTTTCCCCATCTCCACTGAATTATCTGACTT AAAAGCAAAAGAATTGAAGTCCCCAGCTATAAAAATGAGAACATCAATCC CCATCGAGTTTTTATCTCCACTGGCTAACAAATCCTACCGGGTCTGTTAG AAGGGTGGTTTTTTGGGAATTTTGAATACTCCTTTTTTGAGTTTCAAAGG AGATCTGAAGTGTAAATTTATTTTCATATTGATAAATTTATTTATATTTT TTGTTACATTTTTTTATTTTTTCTACTCAACTTTGGCAATTCAATAATCG CAATTATACAATTCAAATTATATGATCCAATAGCATATAGCAATAATAGT GTTTAAATCAGTTAATTTTTACACATCCTGTCTCGCATCCTGTCTCAATG TTCTAATTAAATATGAAAACTTGTCTTGCTCTTGTTGAAATTGTTTAAAT CTGGGTTATTCTAATTTTTTTGGACACCGGTGTAATTTACAGACAAGAAA CGTCCGAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054323TCONS_00054323Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054323-proteinTCONS_00054323-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:223745..230454 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MAPK1IP1LPREDICTED: MAPK-interacting and spindle-stabilizing protein-like isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.42 5.02 5.05 4.51 4.47 3.44 5.78 6.11 7.64 6.99 7.37 7.24 8.79 9.38 6.72 7.27 9.55 9.01 6.91 8.64 10.53 9.32 4.42 5.86 4.82 5.71 6.93 5.03 8.15 7.59