XLOC_034371 (gene) - C. hemisphaerica

Overview
NameXLOC_034371
Unique NameXLOC_034371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_243:12809..17076+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034371 ID=XLOC_034371|Name=XLOC_034371|organism=Clytia hemisphaerica|type=gene|length=4268bp|location=Sequence derived from alignment at scaffold_243:12809..17076+ (Clytia hemisphaerica)
GCTGTATATAGTATGGAATTTGTTTTCACAAAATATCCATCAATTCATAt
attatattttcttaaaaatatttttcagatgaataaataccaataaaata
aaagaattttcaagtGAAATAAAAATTCAGTACAAACATTGTTGACGATA
ATGGAAATGGCTTCAGCTTGTTGTTTTCAGTATGGTACTTTTGATGTTTT
CTCTCTATAACACAAGGTGAGTGAAATTCCAATTAATATGCGAATCAAgt
ttaaaaaaccatacaggagAGTGGACGAACctattcaaatcaaaaaaaaa
attattatgtcgataccccctggaaaatttgcAAGAATACCCCttggaaa
gatttttttcatccCTTAAAGTGAGAGTGGACAAACTGAAATCATTCTTC
TACCTAGTGAAAATTTTGGAATATGGAATAAccttttacccccttggaaa
aatgaaaaaagggcCCCTGTATGGATGTAAAATGGAATGACCCATTCTTT
TTTCATGATAACAAATGTCAAATCATATCCCTCAGCCATACAAATActga
gaaaagaaaagagagaaattttgctacttttttattaccttaaaggaaaa
aGTGTTTGCCGGAATTTAAAGATGTTTATTTAGAGGGAATTAGATTTGGt
ggatgaattgaaaaaataaatttttttggagaAAGGATTTCTTTGATCAA
GAATCATTATCAAATgagcacaaaaaaaaaactaaaaagcgCCAGAGATC
ACAAGAATATGGCTATAATTTACGTATgtagggaatttaatttggttgTT
AGCAGAGAAAGatttttggtgggaacttaatATGACAATTCCGACACATA
TTCTttccgtcaaaatttcttccttttctgGTAAATTCTCATCCCTTGAA
TATACATATgtgatctttcattggaacttctgtaaaatcgggattatttt
ggctaatttcctttgtatctccttaagtagtgctcataaggAGATTAAAT
TTAGTATATCAAGTCtccttatagcaatgtaaaagtaggaaaaaaggttt
tttgatacatcaaactGTTCACTAGTTATtgagcactttcgttttcgaga
gatcactatatcccgtcctcatcccggttgagatccctctaaatcggaat
caagataattccggataagaaagtgctagagacttgaaattttcacagaa
tgtgAAAAAGAGAACGTTTTTTCTCagtcaattttctaaaatttggctaa
aacaaggaattttgaatccgattaatccaatGAAAGATCGCCGTGAATCA
CTAATGAGGACAGTTTAAGAATCCCCCTCGCAATAGGGGGAAAAAGCTCG
ATATGATTTCACttgaacaaatatttttgtttacatctttAGCGTTGGCA
CCCGATGGAAGTATTATTCGAAGGTCAATTGGAACGTTCCAATCTATTTA
GTGGCAAAGAATGGAAACGCGGGTACGCCGTATTACGGAAACATCCGACA
ACCGGAAGTAAAGTGTTAGAATTTTATAAAGACTCGCATTGGAATAAAAA
CGAGCCGAAAGCTGTTTGTAATTTACTGTCCAGTTATGAGGCGTCTTACG
TGGTAGGATCAACTAAAAAACGTTTCGTGTTTGAACTGAAAACGGTTGAT
CACACGTACGAACTAGGTGCTCCCAGCGAGGCCTTACGTAAACAATGGAT
TGACAAATTAAACAGCGCAAAAGACATTTTAAACGATAGCAGTATACAAA
ATATTATACAGACTTTTAATGTTGCTCTCGTTGATGAAACTTTAGTACGA
AAACATTTGAATGGCTTTAGCGGAACGTGTCAGTTAATAGTGACGGATTC
GGAAGTGATCGTCGTCGCAGCAGGACAAATCAAGATCCGTTGGAAGTTCT
CCACTATAAGACGCTATAAGTCACAAACGGAAACGTTTGTTATTGAGGTC
GGGCGGAAGGCGCCCACGGGTGAAGGTGAATTCCGTTTCGACACGGTCAA
TCCAATCGAATTGTTCGATGTTCTCGATAAAGCCGTGAAAGATCGAATAC
GTGCCAAAGGAATCGAAATCTCTACATTAACACCTTCTTCAGACACGGCG
CCCTCTTTTCCTTCTCCACCTTCGGGCGTTGGGCGTATGCAACCACCTGC
AAGGGTGGCTTCTACCAACACCGAGTACAGTCATTTAGACCAACATATGC
ATAAACCAAACTTAGCAACGAGCAGTACCGAATACGACTTACTTTTCAAC
AAAGatcgctttcaacaaaaacgtcgCTCTGAACCTGTAATCAAAGCACC
TCCTTTCGATCACAACGCGCGTAAATTAACAGCTGATAGTCAGTTTTCAA
ACGAGCACGCTGCACAAGCAAACGAGGATGAGGAAATGTACGAAGACATG
AACGCTTCCCTTAAACATCACGACGTCATTAAATCATCGGGCGATCAACG
AAGGCCGCCCTCTTCACGCCCCTTACCGCCGCCCCGTGGAGTAATACCAG
CAGACGGTGTGAAGAGGCCGTTAAAGAAATCATTATCGTCTCCGATAGAG
GAAAACACTTATGATGCACCGAACCATAAAACGAAAATCACTTCTAAAAA
CAGCGATTATGATTCGCTTTTCAATAAGAACACAgcgcaacaacaacaac
acattCCATCTGAAGATAATTTCTACAGTCATTTGAATTATAATCCCACC
CCTACGCCTCACCTTCCACTTAAACCGTCACCATCAAACGGTGACATACC
ACATGACCAGCAACTAAAAAATAAACCCAAAGCTCCCCAACCAAGCATGC
GAAAACCCATTTCACGCCCACAACGAGCTGCGCCCGTACCACCCGGGCGT
TCTATGCCAGATGCACCGTCTCCAAAACCAATTTCTTTAAGTGCTAGCGC
GGGCGCCTCAAATGACCTTATAATGCAACTCAAAAAGCGGAACATGGAAA
AAGGACTTGCGAATCCACCTTCCGGAGCTAGAGATGACGTTTACGATATT
CCGAACTCGACAACCGGTCAATCTACGACAAGTTTGAATCAAGCACCGGT
AGGCTACAATGCTGTTGGGGACGTCATTACTGGACAGTATAAAGAGATTG
ATAAAGATGCGGACGGTTATGTTTCCGTTCCTGATAGTACACCGGTGATG
GAGGATGATATATATCAGGTACCCAAATAAATGCAAAAGgtcttttaaaa
atgttcttttcgtGAGCACTGATAGCCTCGTTCTAATACGATAACacttg
aaatcaaaagaaatcgaGCTGATAGAAGTCTAGAATTATACATATACATC
GTTTCTGTTATTTTCCAACAAAActgaaatgttttctttttatttcatat
gCATTGTTTGAAAAAGAGACATTCTGGTGTTTCCCAAAATTGATTTATGA
CCTACACTGCTGTAGAGTTCGAATAGAAGCTCGAATTTGCAATTTGCAAA
TGTTTATGTGTTTCCATTTTATAgagggctgttccattaaaaaaccatac
agggggtggacgggGAAACATTtacgaataactttttacccctttggaaa
aatgaaaaaagaccctctggaaatttttattggataaccctctggaaatg
ttcggcCACcaccctgtatggatataaaatggaatggcccattttttCTT
CTGGGAGGAGGGGTTCTATCTTATTGTTTAGTTAAGAGTTCGATTATTTT
TCTAACGTTTTGtacatatattttttgtatCATTTTCAAATCacttaatt
ttttgtaaaagatttttctcacgttttttctttttttacatttcAGAATT
ATTTTCTACTCtttaatattgtatttttcataATGGAAACTTTCACacgc
tacggttccgtttcgctccgaagcGAAATTAAGccattctattgtttaaa
tttaagttttacgtcacttctgaCCAATAGAAGACCATTTCGTTtcagag
cgaaacggaaccgttacGTGCAAACATGATCTTACCGTATCCCAAAGCCA
CCTTTGAGACTTTTTACTTCACTGGTGGACTTCTCACACTGCTGGCAGGA
TCGTAAAAACCAACAAAGGATCTAGGTACGACTTCCACTACAGCAACAAA
GTTGCTAAAAGCTTGCATATGGCTTAATGGCTAAGATTGGTAGTTAAAAT
GGTTAGAAAAAGATATCATTTAGCACTTTTTTGAGTTGTTAAAtgattta
aattcaaaattcatgaaCAGCTTTTAGGTTGAAATTCCTCCAGCTTCAAA
TCCAAAGTTTGAAATTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054508TCONS_00054508Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054508-proteinTCONS_00054508-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:12809..17076 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.8	4.24	2.5	1.92	13.02	10.63	14.26	15.16	9.66	15.75	13.45	7.77	11.13	10.28	11.78	13.06	14.04	10.64	10.77	11.68	8.64	10.13	10.08	11.2	11.67	12.9	8.86	7.19	12.63	12.41