XLOC_034592 (gene) - C. hemisphaerica

Overview
NameXLOC_034592
Unique NameXLOC_034592
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_246:95959..99889+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034592 ID=XLOC_034592|Name=XLOC_034592|organism=Clytia hemisphaerica|type=gene|length=3931bp|location=Sequence derived from alignment at scaffold_246:95959..99889+ (Clytia hemisphaerica)
TCAAACGACGCCTGGCAATGTGTGCAAGAAAATTGGGGCGAACCAAAGAA
GCAGTCAAATTAATGAAAGAtgtaagaaaacaaaaacacttGTTTTTAAG
AATCCTTAGTTTGTTTTACTTTCTCTTATTTCGATTTTCTATTatgatca
ctttcgtttttcttGTTGAAAATAAAAGGTTTAGTTTTTCTAATCGTTTA
ATCTTTgttaatttcaatatttcagTTGCTGAAAGAGTACCCTTTATTAA
GTGTTCTCAACATCCACGAGAATTTGATCGAAGCACTACTAGAACTACAA
GCATATTCTGAAGTGCAGGTAGATAGAATTTAGAACAATGAGGAAAATTC
ATTATCACAGAGACATTATTGCAACCATTTTTTATGATTATGCCTTGCTg
taaaatataaagttatgCTCCTTCCTCTAAATTTTACGTTCAACTTTCCT
ACTTTACATGGTTGATATGTTTGTAATTTACTTTTTCGGAAGTGACTGGT
TGTTGTTGACCAAGGGTGAccgtaaaatttaattttttgatttttatttt
ttagcaagTACTGACGAAATATGATGGTGAGTCTTggttttttaatttga
attaaaatttaGATTATGAAAAAGAATTCCAGGGGATTATTATTGCAAAG
catttattttttaaccaaaatttatGTATTTTCTTTCTGTATTATGAACA
TTGTGTCAGTTCTTTTGACAGGTTGCATCCTCATAGCAGGATGGGATGCA
GGTTTATTAAAAGTCAACCCGGTTAATTCTTTTCAAATCAGACATTTATC
AATCTGCAACAtactctttttgtttttgtttagatATCAGTCTTCCAAAA
TCTGCAACAATATGTTACACAGCCGCCCTCTTGAAAGCAAGAAATGTAGC
TGACAAGTAAGTCCTTTCTCCTCCTGTCCTACAAACTTGACTCGTCCATC
TTGTAAAGCCAGATCTGTAACAACTCAAATATGACAATATGAGTGATCTT
CACTCAGTCTTGAAACATGTTCTATATAGGAATTGGTAAGTTGCATATTG
ATAATTTCAGATTTTCACCAGAGCTAGCAGCAAAGAGAGGTTTGAGTCCA
GCAGAGATGAGCGCAGTAGAAGCAATACACAGAGCTGTTGAATTCAACCC
ACACGTACCTAAGGTTcgtaaaaaaatctcttttccttgTTAATGACAAA
TATAAAAGTCTATATTATCATATATATGAAAGAAAGTTTTCCTTGAACTA
TCTACACTTTTGCTCTTGTTTTTGTTCCGATTCTTATAAAACCTTTTTTG
TTGATCAGTATTTATTAGAAGAGAAGAGCGTCATTCTTCCAGCAGAACAC
ATCCTGAAACGTGGCGATAGTGAAGCCATTGCATATTCTTTCTTTCACCT
TCAACACTGGAAACGTCTAGATGGTGCTCTCAATCTACTCAATTGTACTT
GGGAAGGAAGTAAGCGCTTTTGCCATCGCCTTTTTGATGTGACCCCGTTC
TTTTACTATCATTTGCGGAAGCGAGCtaagggaccattcaaaaagtacgt
acgctctaAGGAGGGTCCTTCGAAAAGCGTACGAAAGCGTACATGGGGGA
GGGGGTCAATCAAGGAAATGTGCGTACGCTTTGCAAACTCTTTCAAACTG
TTTTTTCCACCTTTTTCTAACTTTCtacatttgaaaaatggaaatattAT
AAATCTTTCAACCCATGTTAATTGTGTTATCCATATGTCAACCTGTTATA
ATCTTTTAGTTTCTTTAACTTTATATCGTTACAATCAAGACCCAGGAAGG
GGGGAGGGGTAATTGGAAAAGCGTACGTACGTACGTGGAAGGGGGTACTA
TCAAAGCGTACGTGAGCGTACAAGGAGGGAAGGGGTAGAATTTTGCTTAC
TtttgagcgtacgtactttttgaattgtCCCTTAATGGAAAATCAAATAT
TGCACACCTTCCCATAATCGGTGATAGCTGCCCACTCCATTATGTGATAA
CATATCCTTACATGAGAGAATAATGATAATATACTTCCTAATGTCTAATC
CTAATGATATAAAATTCGATTTACTTTTAGCGTTCCGTTTGTTACCTTAT
CCATTGGAGAAAGGTCATTTATTTCATCCTTATCCTACTTGCACCGAAGC
AGCCGACAAAGAACTCCTTCCTGGTGAGTGTCATTGACCATTCATTCATT
CGCATTCATTCATTTGTGTGAAATGATTTCTTTGTTGGGGTTACTCAGAA
GCGCAAAATAACAGTGACAAAATGTGGCTCCCTGTTGTTTATACATATTC
AGTTAGACGCTAGCGTGAACCAAACTCAACTTCTAAGGGAAAGATCCGGC
AATTACGGTTTGTAAGGGTTGGCACCATCCAGTATCAGAGACATCTCTTG
TTACCTCTACCCGTAACAGACCGAAACACGGCAAGATNaaaattggaaaa
atcataaaaagttccatacactaaaattttattatgatcttcatcaaaga
taaaaaacaaagtgaatttttgatccaaaaaatactttttggaaaatttg
cttggtaccttaccaaccctgataaatgaaaaatttattcttattttacc
gaccgaccgaccaaccgacccatatttttctaacaatctacccgtagaac
aacaaattaaattggtcttgcattacttttggtttttaatttctctaaac
ttttatgttttcatgcaaggtgtgatctgatccttaaaatgcaaaaatga
agacattctattgcattctctaaaagtgcacacacatgtaaatagagctt
tgtgaatgccataaaatttttcccctatactgggacctaaaattttatca
gactggggggacctaaatttggcggggggacctagaaccccagtcggagc
catgaCGCTTTGCAAACTCTTTCAAACTGTTTTTTCCAGCTTTTTCTAAC
TTTCtacatttgaaaaatggaaatattATAAACCTTTCAACCCATCTTAA
TTGTGTTATCCGTATGTCAACCTATTATAATCTTTTAGTTTCTTTAACTT
TATATCATTACAATCAAGACTCCACTTTTTTTCTACAGGAAGGAGGGGGT
AATCGGAAAAGCGTACGTACGTGGTACTATCAAAGCGTACGTGAGCGTAC
AAGGAGGGAAGGGGTagaatttttcttacttttgagcgtacgtacttttt
gaattgtCCCTTAATGGAAAATCAAATAGTGTACACCTTCCCGTAATGGA
TGATAGCTGCCTACTCCATTATGTGATAACATATCCTTACATGAGAGAAT
AATGATAATATGCTTTCTAATGTCTAATCTTAATGATATAAAATTCGATT
TACTTTTAGCGTTCCGTTTGTTACCTTATCCATTGGAGAAAGGTCATTTA
TTTCATCCTTATCCTACTTGCACCGAAGCAGCCGACAAAGAACTCCTTCC
TGGTGAGTGTCATTGACCATTCATTCATTCGCATTCATTCATTTGTGTGA
AATGATTTCTTTGTTGGGGTTACTCAGAAGCGCAAAATAACAGTGACAAA
ATGTGGCTCCCTGTTGTTTATACATATTCAGTTAGACGCTAGCGTGAACC
AAACTCAACTTCTAAGGGAAAGATCCGGCAATTACGGTTTGTAAGGGTTG
GCACCATCCAGTATCAGAGACATCTCTTGTTACCTCTACCCGTAACAGAC
CGAAACACggcaagattttcaaaaaagcaaaattcGCTTTGGTTACCCCT
GGTTACCCATATGatattttttcattgcattttattttttagaattccAC
AGAGTATCGGTGTATCCACAGAAAGAGATTCCCTTTTTCATTCTCTTCAC
TGCAGCACTTTGCTCTTCATCCGCTGCTCTCGCCCTCCTCACCTACAGAT
TTCCCGAACAAATGGGTTACGCTGCAAATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054895TCONS_00054895Clytia hemisphaericatranscript
TCONS_00054896TCONS_00054896Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054896-proteinTCONS_00054896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_246supercontigscaffold_246:95959..99889 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
112.18	104.21	50.28	41.35	62.59	49.72	43.53	48.49	44.21	53.14	39.64	40.4	21.22	21.07	30.49	33.57	33.8	38	13.84	17.64	17.47	21.51	67.34	59.42	25.12	28.92	23.99	18.75	42.74	43.33