XLOC_034868 (gene) - C. hemisphaerica

Overview
NameXLOC_034868
Unique NameXLOC_034868
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:547464..558379+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034868 ID=XLOC_034868|Name=XLOC_034868|organism=Clytia hemisphaerica|type=gene|length=10916bp|location=Sequence derived from alignment at scaffold_253:547464..558379+ (Clytia hemisphaerica)
CGACTTGAAGTTTTTTAattagttttattttttgatttggcCTACAGATG TCTTTTGCGGTTCTAACAAAAGTATGTCATCTTGAAATAGAAACTAACAT AGAGAAAGATTCAAAGATTCGTGTTGCAAAAATcaaatgtattttctttt gaatacTGTTTGGGTAAATTTTAGGACTTCAATTTTTTGTCGAAATTaat ttagaaataaaataaaaaaataaaatggaggATGAAACAAAGGAAGAAGT CGTTATTGATCCATGGCTGAGAACAACCGAGAAAAGAATAGAAGATGCaa gaataaagaaagaaaaaggaacaGCACTGTTTAAGGTAAgaaattcttct tcttttgaATGGAAATATTTCATATGCAACGATTAGTCCCAGGGTCTCAC TTTCGAAGTCGAGAATCAAATTCGAATCGAGAAAATGGTATAGCTCATta ctaaaatcaaaaactcaCATAAAGGgagtgtttttcattttatttactCC AGGGCCTGGAATTCCCAAGTtatttttttccgagttatttgTCCAAGTTA TGTTGCATGTGACGTTCTAATTTCAGTTTTGTATCACAAATGTGATAACT TTTTCGAGGTTTTagcttttcgagttatttggtgttttttaactcgtttt tttttcgtgcctttagAAGCAGCCAACaagcccatttccccgaaatatct gtttcccttttccaggagagagctttttttgaaaaatggggaaacagatc cgattttctaggaaagaccttttccttaaaattaTCTGTTTAGCTTTCTT AGTTGCTTTTATCTATCTATATCTCTGCCACCCTTTCTGTCGCTTCCTTT TACCCCCAAATATTATCTTTAAATATATCAACAAATAACTCTAAAAGtca aaggcacgaaaaaaaacccaattaaaaaacaccaaataactcgaaaagtt aaaagctcAAATCATTTTTGTGGTTACGTTATAAAAACCGAAAATATAAC ATTTCTAAAGTTTCAAGGGGggggttcatggttggcggaggagcggaatc ggcccttttttcggacggagtggcggaatttggcgaaaatttagacggaa ttacggaaatggggttctctgacggagacggaaaattagacaattttagt gcggaaaaacggaatttagcaaaaaatttgcggaatttcggaattggtaa aagatattcaaaatttgcggaattttcgacaaaaatattgaatttcaaag gaattttcggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNCCCCctaaaaccccccccccttcaag GGCATTtgtgaaataaaaattattgacGATAGGATAGAACGCCTCAAAGA GTCGATTCAGAATCACCTCGAATATTTGGTATGTTTTGTGATTCGACTCA TCGTTTTAATAACTGCCACCTAGCTTATctacatgtttttatttgataaa tttaatGCCCTTTAGTAGAGTGGTTATAATCTTGTCGAGTCAAATTACCA AAAGGCACTTTGTTTGTTTAAAAGTCAAATCTGTAGATTGTAAGTTTTGT ATAAAGTAAAGTTGTACACCCTGACAGTAATAAATGTCAGTAACGGGAGG TATAACGTGAACAGCGAGAAAGTGTTCGATTTctgtattttattattttt aggctttctgGAGTCTGTTCATAActtgttatattttttatgtGTTCAGT GTGTTTGTTTCAATTTATACAAGtagtaaataaaagttttcaCGACAACG TGGACGAAAAAGGGCAATCATTAGCTAATATCTTTACAAACTATATATCA TTTTGATGAATGAATGAGTAGACCTTTCAACTGATGTACCCTTTTAATTT AATTATTCATTATCGATGAAAAAGCTATTTTGATacgtttttatttaaaa attgattttggaacAATTTTTATTCGCCGGGTCAACTTTTTGAAATCACT CTTTTTTTTCTCTATcaagtttttaaaagaattaaaagtCTTTCAGCGAT GCAAGATAATTTTGTGGAAAATGATCGAACGTTGTCCGAAAAATATCACA TCACGCGTCCgaaatataaaaatgaagagCTAGAAGAATTACGAGGGTTG GTGGCGAAGAAATTATCAGAGAACGAAGGATGGAAAGAACGCTGGCTAAA CGAAGATTCTCTTATTCGATTCCTGAAGGCTTTCGAAAATGTCAAAGACG CTTTGAACGGGTTAGAAGAATATTGTAATTGGAGACAACAGAATAATGTC GACCAAATTGCCGATATCGATATATCGGCTGATGAAAAGATGAAGAAGGA ACAAGAAAGAGATCGTGATCGAATTTTCGACGGTCATTACGATCGTTGTG GGCGCCCCATACTTTTAATCACGGTTCGAAACCACGATAAACACCATGGC GATTACGACACACTGTACAAGTATTGTTTGCATCGTTTGGAAAGTATTTC CAATAAGGCTGACGAAAGGGCTTTCGACAAACGAATGGTtcttatatttg atttaaaaggATTCGGACTTTCAAACATGGATTATAAATTTGTCAAGGAA TTGCTACATGTATTGAAAACGTATTTTCCTGAACGCATTGCGACCGCCTT TATCATCAACTATCCGTATATCTTTTGGGGGTGTTGGAAAATCATCAAAT ATTGGATGAACGAGGTGACGAGAAGCAAATTTATTTTCGCATATGAAAAC CAAGTGAACGACTTCATCGACTTGAGCTCTCTACCTGTTAAGCTTTTCTC GCAGAAGACTAAATAGCATCATTAATTAGGAGCGCGAATTTTGTCAGTCC TTAGTCGCTGaattaatattttgatattttgcatctttgacattgtaaac attttacaaaatttacaaaatttcatatCATACATAAATGTTATATATAA CAAAACGTTGTAAATAGATTATCAAAATATGAACCAATTGACGGgacaaa gattttattaaagtaCGACAACTTAAGTTTATGTAAGAAGTTTATAGAAG TATCATATTTCATAAATCATGTATATAGGTTTAAAGATTATATCAGAGAT TATAAAAAGTGATACTTAGTGTGTTTTATGAGGTGCCTTTCGAAATGCAA ATATTAATACCAAACCTCCTTCAGTATTTATTGTAATCGTAAAAGCTTTC TTtcataagaatacactttatgaAAATGAACGACGGAATTGCGGGAATTG GCCCATGGAATGTAATTCAAATGTCACTATCGTATAATTCGTATACTGTA ATCTTTGAGCGTTTTGACTAGTGTTAGATTTAGGTTTGGTTTGCATCCTA AAACCTAGAAATGCCGTtagaaagtttatcccattaaagtagtttttgaa aaaagtcgtAAAGCTTTTctcgaagattttttttctcttttcgcgGCGTG ATTATAGCAGGCCTATTACAGATTAATCACCCCGCtccgtttttttttat aaggaacctttactttgctctgatcctggagttccttatttttacagaga atttcagcctcaaagttccttatcgagttccttatttacatagctgctaa gtttggataaccatccGTTACTGTTCCtcaaaacttgttttcttattctc agcctgagcagttcctaaacaattccttattttttggaccattttcagcc tcgagttccttataaacgtgttccttatataaaaaaaaacgtgtatcaat gatcgcgtcttttttttttaaatatctggttTCCCATTGTCAGAGGAATG TTCATGCTAAATTTTCACTTCGGGTCAACTTTTGTTGAGGATATGTTTCC ACTTTAGTCAGAAAATCGGGATTTTTGTCGATTCAGCAAAATTTGCATAA ACATAAGCATGTAAAATGGAAGCAGAATTATCGGAAAAGTAGCCTATAAT TGGTTAGTTAGCCGATGAAAAAACACCTTTTCATATTTCTGTTCTCAAAG TTCAATGTTATATCAGATTAGattaaaaagtttcttttgcTTTAGGCAAT GgaacaaaagtgaaaaatagaCGCGACTATTGATATTCTGTTGATATTCT TATTGATCGacatttttgtcgattttcggCTAATTAGACTATACAACATA GTCTAATACCCTATGACAGGCTAGTTTGATGCTGTTCTTGACTGAACTGA CCAAGTAAAGTTTTAAAGGATTTAAGGAAGATTATAATATTGGAGACTTA AGAGACTTCACGGAAACACAGATAGCACAGGTGTCATAGTTTTACAGGAC TAGCCAATTATCCTTCGACATGTATTACAACTTCATCATGTTTTGCGGTT GTACTTATTTTGTTCCTCTCTCTACCAGAAGCCACTGGCTATCCCTGTGG ATTATCCTGATTTGATTTTGTAgatgtttttttctcaaaacactTTCAAT GGCATCTCTTCCAAGTCCATAAAATCATTCAGCTGATCATAAGCAGCGAA AATAAACTTGCTTTGTGTGACGTCATTCATCCAGTGTTTAATGATAGCCC AACATCCCCAAAACACCCAAGGGTAGTTAATAATGAAAGCTTGTGCGATA CGTTCTGGGTAGTAGTATCGAAGCatgttcaaaaagtttttcacataCTT AAAATCCATATTTCTCATACTAAAACCGTTAAGATCGAAGATCAAGTTGA AACGTTTATCTGCGCTCAGCTCTTCAGCTTTTTGTGCAGTCACCTCCATC AGCCAAATAACGTAACGAAGCAAGCTGGGATAGTTACCATGGTAACGGTC ATGGTTTTTAACATGTACTAACATGATTGGTCGTCCACATCGATCAAAAA AAGTCTCGAAAACAGTTGCTCTACCAACTGCATCTTGTCGTTTTATATCT TCATCATTGTCCCGTGTCAATGCGGCAGTCGTATCAACGTCATCTTTCAG TCTCCACTCACAATAATCTTCCAACGCTTGCATGGTTCCCTCCACTGTTT GAAAGGCTTTCAAGAAACGAGCCAACAGACCGTCGTGGATCCATTCTGCT TTCCATTTCGTTGTTTTCATTCGTTCTTCAACACATATCTTCAGATCTGG TAACAATTCTTCGTTTAATGTTGGACGAATGATGCTATATTTCTCACAAA GCTCCTTATCTTTTGCTTGAGCTTCATTTGCCTCCATGCTGTTCTGATGT TTCGACTGATAATTTATAGTGTCTTATGTTATATGTATAGTAGTCAAGAG CAAAGTGCTTTCTAAAACAAACTCAATAAGTTGATCAAGCNTTGTCTTAT ATTATATGTATAGTAGTCAAGAGCAAGATTCTTTCTAAAACAAACTCAAT AAGTTAATCAAGCGAAGTGCAATCAATATTGAGTAGGTATTGGAAAAACG TCTCAACTTCTCCTTTCTGTAACCAAAGAGTCACCTTGTTTCAGCAATTT GAATCGGTTCAATCAGCTTGTTGTTGATGAAATATCTCACTTCGTTACAC TACTGCTAGCTGCTTATTAATAGTACGACGTGATAATAATGTGATATTAC TCTACATATGATTCATTTAATTTGCTATTTTGACGGTATGATAAGAATGT CTTTATAATAACTTCTCTTTGCTAAGCAACGAAACACCAAGCGAATTTTC CTTCACTTTATAGTTCGATCGAAAGCTCTTGATAACTGAGACAAACGCTA GCTTGCTATTTAATTTTCCTCTTTTCCAATCCAATGCAAAATGTACGCAA CAATGTATTCTACAATCGTTTTTGATGTAGAAAGAAAACATCTTTAAGCA TCTTTAACTTTGTCGTCAAGGCAACCTTCATATTATTCTTTTTCGATCTA TCAAAATAAGGGGAATTCTACGCAGCTTTTATACTTTGTAGGGGAGCTTT TCAGATTGACTTCTTGATAACACCTTACGAAAAAAACCTACAAAATTAAT AGAGGTAAACTCTATCTGAATATTGAGGATGagactttttgtgttgaaag tacgttGTCTATGATTGTCTTCCCTAGCAGTGGTGTTTTGTAGAAAGTAG TTTTCGGCTTTTCACGAGGAAGTGAAAAAATGCCcttttagctatttacc ccttaaaatctacaaaatggtttttctcgaaaaactttttatagaatggt ctcaaattttgaacagcgATTCgctgaattttaaaatcaaaattcccctt aaaacctacaaaatggtttttctcgaaaaactttttatagaatggtctca aattttgaacagcgATTCgctgaattttaaaattaaaatacaccttaaaa cctacacttTTATACCTTAAAACTCATAAAAGCTACAAATATCGACCCCT TGCTCAAAACTTACTGAAACTGTAAAATTGCAATTCAGGTGCTGAAccgt gattcaattgatcaaatacttgctagaaatccatccccaaaacaatattt tctATTCTTAATGGATTTCATGCCCATGATGCAATTCCGCctgttttttg tcaaaaacgGCTTTGCATAAGTATAGGCACccaaaaagtataggttttgt GACCTTTATTTCTATTATTCTAGgtccgaaaaacttgattttttgaaggg attttttataaaattttgaataaattcgAATTTTACGACACTTTGCGATA ATTGATATCATCGAAATTAGGTAAGTacatttataagaggttgtaaaacA GACAACAAATAGACCAAATAAATTTATTGCGGGTTAAAAAACGTATCACC CATGTCGTGATTACCTAAAGCGTTATTAACTCGATGTTCTTGTGCAAAAT ACAcagaatcaaaaaatattttaatttgttACCCGTGCTTTTTTATTCCA CCAAATTAAACTCTCTGCCTTGGGATTGTTGTAATTTCCGATGTTCTCTT CTCACTTATTACATGCACTTGCGGTGTCCTTTCGAGGAACGATGGCTCTG CTCCTTCCAATGCTTCGTTTAGTCATAAGTAGTTAGCTGAGCTGGCTGAC CGTGGAACCCGTGATCataatcgaaagactgtcttaagggttggtctaaa aagcagggtagccaattggctaccccatttgggctaggttgtggggtagc CCTTTTTTGCCCAAGTATTTAAAGTCTAGTGTTTTAATTTGTGAGAATAT AATATTAGAAAGTTTTAACAgtcatttaaagaaaaaaggtcGAAATTTGC TCCGTTACGTTGGTTACTGTagtcatttttgtaaaaagtactAAAATCTA CTTCTGTTTACTGAGTGTGGTCGCCCACCTTGTCTTCCTTCCTCTCacac tttgaaaatctacagACCAGACCATTTTTTATGGTGAAATTTTGATCCCA AACATTCTAACAGagactcaaaatgaaaatcagaaaaatgggTAATCTTA TGACATCAAAGGATAATTTATCTTTATGGTAAATTAATTATACCTAATTA TACCTAATTAATAGTAAGTAATGTAAGCCTTACCCCTATGGTAACTTAGG GATTCACACCTTGTAAAAGAAATTacattttataataaaaaatgtaATCA GAAGGTCTAAGGTCAAATAGTGGAGAAAATAAGCTCTGACCATGTGTTAT Aattataattaaataattagaatattttttcaaatttttaccccctggct tCAATGAGGATTATCAtctaaaaagtttgtttttttttgctctggTCCGT GAGATACATGgctaccccacaacctagcctaATTGGCTATCcaaattggc taccctgctttttagaccaaccccttTCTTAACGTTCTAGATTTAGTCTA GCTTTCCTCTTTgtcgacccttacagtacattttCTAAAGTCTGACCTAA CCTGATGATGGGCTGCTGACCTTCAGTGACCACCTTCCCCCAGATGTTTT TAAAAtgtacaatagaccttttcatgaattacgtcacgaacatcacttgc ctcgtattcaaacaattaccatggtgattatgtcccttgagacattaaat tatttttttataaatagaaagaaatagaaagtagttttagtAAAATCCGC TGGCAGTTAAAAACCacggcaataatttcaaaacgaggcaagtgatgttc gtgacgtaatttgtgaaaaggtctatttgtgGGGATAGCCGTAAATCCTT TGCTTCCATTTTCCGCTTTCAAAGAAATCACAGAGTTAATTGATTAATTT AACGAGACGAATTAAAATTGAACTAGTCGTCCAAGACGACTCTTTAACAT GATAATCGCTTCACTCGCtgtcatttttgagaaattaaatgtatttttta tttaaactaGGAATGTATAaacaatttcttgtattttcgaaggaaaatga ACAGTAGTATTTTCTTGTGTATTGAATGGAACAATAATGAAAACAataat gaaaacattttaatgtatttcccaaggaataTTATGTAGAGAAAATGTCT TATTTTCCGAGGAAATTAGATAAAACACAACCCGAAGATCAGCATCCttc ttagtttttaaataaaaaacaacaagaaagtgTTCGTAAATTTTGGAATA TTTCGATGACTTCTTTCTATACTATGACTTGTCAACCATTGACAATGATG AGATAGGAGCTGCTCAGTCATCTATAAGCAGCCGGTGaagcaatttttta gaaatatgtgttcttatcttctaggagaccacatgttataaccttaattt tcttatataattgatgtgttctgatttctatgAAACGTTTACTGCATTTT TGTTTCCCTAATCCTTAACTTATTGCTTTATGGTTGGATGTGTTCTGAAA TCTAAGAAAAACTTTGTCGCAAGCTAAAATTGTGAGATATTTGTTTTTGC CACGAGAGATGTATTCTGaaactttctagggttactaggcaacaagatga CATCAAAAACACGTTAGATGAACTCGATTATACCCTATGTCTGGTCATCA TTTCTAGCTGATTGGTTTATACAGCCTTTatcaaaacagatcaaaatttt tagCTGAAACATTCTCTCAGAACATATCgggaaaaaaaggtcgccttgCT GGCTGCTTTCGGCCATCGTGACTAACCATCACACTCGAGGGTTATACTTT GAAAGACTAGCTAAAATAGGAATATTTGTAAATTAgatatttaaaaatta aaaagaatgagTGTTCAATTTCAAAGCGCTCTTGAGAGCGTTCAGcaaag aaatttagaaaaaggaaaaaatacattttttacaGCTTTAAGGTTGAGCA ATTAAAAGGTCAATGAAGAAAAGGCGCGAAAAAAGAATTGTCGTCTGCTT AAATATCGCTAGCGAAAGAGCTTCATGCGAGAATCGGAGAGTTCAGATTT aggcgtattataatatagatgtTTTGGTTCGAGTGAACTATAGATcgaaa attaaaatataaggaATAAATTCACAAGTATTATCGTTCTTTGATTCATA TGGCTCCTCTATTGAAAAAATTCCCCCATACTTCCCCATCTCATCCAGAC TCTGATAACTTGAATTGTGTGGTATAGTACTGTATGTATCTAAGATATTT TCAATGTGCATTTGTTTATGTCCTTTTGTTTTCTTCACAGGATAAAGATT TCAGAGGAGCAGGCCAATGTTACATCAACGCGTTGAAAGATATCATACCT ATCCTCCAACCATCTGATCAAACTGAAGAAAGTACGATCAAAGAACTCAA AGAAGCTTTATTTTCCAACCTAGCTGTATGTCAATTGAAATTACAACAAT ATCAACGTGTCATTGAAAACTGTACGAAATCACTTGATATTAATGCTCAA AATGTGAAATGTTTGTATCGACGAGCGAGTGCTTACTTACAATGTAGAGA TAGAGGGTCAGCTCGTAGAGACATTGATCGTATTTATGAACTGGAACCGA GTAATACAATTGTAAGGGAACTGGAAACAAAATTGTCTTCTCTGGATATA AAAGCAGATGCAAGAGACGCCGCCATGATGAAAAGTTTTCTCTCCTCGTC TTGATCGTTGGTGAAAAAAAGCTGATGCCAAACTGATCGAGAATGGGTCA GATCATATATTTGCCATGGTTGCTTTGCTCGGTCGGACACTTTCATTTAC ATAANGCTGACCGAGAGTGGGTCAGATCATATATTTGCCATGGTTGCTTT GCTCGGTCGGACACTTTCATTTACATAATCCAATATGGTACAACCGGTTG TGTGAACATTTTAATTTCACGCTTGGTATTCCCGGCTCCCGTGTATATAT CTTAACATCGATAAGGCCATGGCTTTTGAAGATGGATTATTAAACTCGAA GATTAGCGAGTGTACCCGTTGGTTAAATCTGATGTACTGTACCAAGCATT AGCTTGAGAAAAGTCTGCTAAAGTTGAAAGAATTGTTGCATGTACGTTAC TGAACTGATTCTGCTGGTGACAGGGGCGTATTTTTAAACAACTTTTGTGA ATAGAATATTCTTCACTGTATCCatgtaaatcttttttaaacatCCCTTT CATCAAAATGATATGTATTGCATCggattcaaaaattgaatgttaTATTA TTATCAGATTGATGATGatcgaaatttttattttatcctcTTTACATTTA TCTAATATACCTCAAGGGAAGTAATTTGGCGAGCAACGAAAATTCGAAAA CCTTTacctttttgaattttgggagaactaattttggcgaaagaCAGGGT AAATTGATTcattttgcttgaaaataagtgttttagacaaaaaattagga gttgtcaaaaaattatttttgacgaggcagtaatttttgttaaccTTGAC AAAAGCTAAATTTGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055350TCONS_00055350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055350-proteinTCONS_00055350-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:547464..558379 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.48 34.49 39.73 37.18 8.12 6.21 7.71 9.02 7.32 8.61 5.54 5.27 5.78 5.06 5.9 5.67 7.69 6.84 4.01 5.34 5.42 5.69 13.5 11.49 3.99 5.8 6.97 5.65 8.23 6.97