XLOC_034889 (gene) - C. hemisphaerica

Overview
NameXLOC_034889
Unique NameXLOC_034889
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1042351..1046337+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034889 ID=XLOC_034889|Name=XLOC_034889|organism=Clytia hemisphaerica|type=gene|length=3987bp|location=Sequence derived from alignment at scaffold_253:1042351..1046337+ (Clytia hemisphaerica)
GTTGTGTAAGCAAAAGCAGTCCActctaatatttttataagacaTCTGTG
GCTCGAAGAAAAGGCAGGTATTTTTGTGCACAAATTCGAAAAACAAATTT
GGAATTTCAGGTGTCTTCATATTCTTCTCTTTATATACAACTACTGCCAT
TCTTTTCTTCCCTAGCTTATTTGTTCACAAATCAATATGAAGCAAGAAGA
TCTCTTGAAATTAGGAGCAAGCTTTCTTGCTGGGAGTGTAACTGCTTTTG
TGGCTCTGAAAGTGGTTATACCAAAGGTATGGTGTTTTATCAATTTAATT
AAAAGCTCTACAGTAGTCCTACTCTAGCATGAATTATAACTTTGGAAATG
TGGTTGTTTCGTCCCTTATATTCATAGAAACCTGAATTTATCAGATGTGG
CATTGTGGGCATGTATTATAGTCGTACCGGTCGTACTACCGTGAGTTGGT
CTATCTAAATAATCTTATAATATATCAACATCCCTCctcgtctaattctg
acacccttctttagagaaagaactaatatgaaagcttgaatcgctgattg
aaaaaggattattcctctctgaccactaaagaaaaacaaagaaaaacagt
ttacGACCCTGCCGCCgccggtgcacccgacagtcgggtgctgtcgggtg
ttttgtcgggtgctgaaatttctaaatttgcaaaaacacCCGACAATAGC
GCACCCAACAGTCGGGTGCTAAAATTCCTAACTTACATGTCGGGTGCTGT
TAAAAGCGCccaagataaaaaaaaagtccaaaaaatggcgattttgatga
cgtcagcattattAATGacagtaaaaaattaaaaagtcgaCCAGCTCATC
ATGTAGCCCTGATCATAGGCTTTCAGAAAAGTATATGGTTTAGTAGTATG
TTTAAGTAGCACCCGACAAAagtgcacccgactgtcgggtgtttAAATTT
CTAACTTCAAACACCCGACAACAACatccgactgtcgggtgcaccggcag
ggtcgtaacagtttcaacctttctataaatttcagctgataaaaagggtg
tagGAATtatagaggaggggtgtcgacattagaccaagttacgctATAGG
GCTGTAGAGGGAGGCACTTGATTAAAAAACAACCGTATGTgcagcccaaa
attaggcctttaaaaTCAGACCCTTAAGGCTTGGGGGCATCGggcacgag
aagtttttttcgcgttggtgcaatgcaacatatgctctccatcccaccaa
cacaagaaaaatcttttaagtAATCAACCATTAATTTGTCATTGTTTttt
tagcaaaaggtctatcttCAAGGTCAGTACACCCCCTCACTGGGTTAAAA
GTATTCCAATTTATTATTTACCTGACAGttaatttgaaaagaacaccttt
tttaatctttgcaattattttcttaatttttatcaGCTCTCTGGTTGCTC
AGCAAGCGAAGGTCGATTCAACACTGCTCATGAACTTGACAAAGCAAAGG
TTGTGAACAGCTATGATATAGAGGACCTTGGTGATAAAGTTGCCTTCTGT
AGATGTTGGAAATCTAAAAAGGTAAACACTTACAGGGTCCTTTTTTTGag
ttaaaatttggtaagatGGTTTTGTTACTTACATACTTGTGTTACTTGGT
GTAGGTGTTCAAGTAGAGTGCCCGGGCAAGATTCTTTGTGAACCATGCCT
CAGTACGATCAAAATGTCGAGAGCAGACACTTTTCATGTCAAGTATTGAA
TTTGAATCAGCTCTCTTGCACCCAGTTTATCCATGAATTTAGGGTTCATC
GGGGATCAACTTTTGAGTGTCAAGggcatttttaaacttttcagttgaag
tgttttttttaagtttcttatGTTCTTTGGTATTGCATTGAATAGCTTTG
CACCTTGTACAAAAAGAGTGCAATCTCTAAGCTTGGATGTTTGATTCCTT
GAAAGGTGGCACAGCCAGCTGCAGCCAGCGATTTTTGTAAGCTTTTATAC
TTCTATTCGCCCTAGGTACTATACCTTCTAACACCTTCCAAACATAGATG
ATGCGATAATGTCCCCTTCTCCTTTCAATGGAATAGATTTTGGATTGTTT
AAGACATACAAACAATAATTGGTTGAAGTGCCTTTTATCCTTCTTAGAAA
GGATTTATGATTAATGAACGTCTTCAAATCTCAGAGACCAACCTGGACCA
GTATTTGGACTTCATAAAACAGAGCTTAAATAAAAGGGAACTTATTCCGT
CCGTTTGGTAATTTAGTTGGATATCTGAATTCGTTTTCTGTCAAGACTTA
TGTATGTTTTTATTTAAGGAACAcattaaaatttaaatattaaatTCTTT
CTGTGACACTCCAAataatttttctctatttcagTTCCCATACTGTGATG
GTACCCACAACGCACACAACAAATTAACAGGTGACAACCTTGGACCAGTA
TGCTTGAGTCGCAAAGAAAGTACTGCATAATATCGATTAGGCTGTATAAa
atttataagattttttattttattctttattatatattacacaaaTAGTA
AGCAATGATTTCGTAGTGATTTTATACTAATGATATTTTAATACCTATAG
Tggaaaaaacatttgaaaataccaaaaaagattgtcgtttttattgtttt
ttttcaagaactttgaCAGTATAAGAATtatagaaaaaatttcaattccG
GAAGACGGATCAAGTTTAAAATACGTACTttagaatttttcgcgagcaga
aactttcgcgaatcaccttgttaagaattttcaaatgcaTTCACTTTCGC
GAGATAGaccaaaattcacgaaaatcgcgaaagtttgtacgcctaaagta
tatggacatttatttgtttacatttttcgcATGATTTGTCTAtatacaat
ttcattttaaaatgaaagtctacaatcatggacaaaatatttgagacaaa
ggggatttcccggcGAAATTTTGAACActgcaaatgatttttaagcgcct
gaaactacagttggaaagtagagttttaacatgagacttaagaccttagg
atctttataaaaactcaaatttgctcgaataaggcttggaatatacgata
aaggtcataatattttgagaattttggttattttaacgtttttcaagatt
taaagttccggcgagaaagtcgattttgggctatctctttaatttaatca
aatatttcaatttggaaggggttggcagacttacaggctatattctgagc
cttattggactatttttgagtcttaagtctcatgttaaaactctaccctt
ccaacctacttaaagcacttacaaatcgattgtggttcaaaaacttcccg
gtgtatttcccttttttctcaaatattatgagcTTGATtgtagcctagaa
gccaccgaaaaataaaaattgctaaaatagcaattctcatccgaacttta
aattctgaaaaacgttaaaatacactaaaatgtcaatatatttcgaccat
gattgtaaatCAATTAGAATATTCGCCTTAAATTTAATTAACCTCATTAA
ACCAAACGACAAGGTAGCTTCTTCTTTGTGAACAAGCGCAATTTATAAAA
TGGTCAGTACTCGTCTAATACACAGAATCACTAGTTAAATGGGCGTCTTT
GGTATTTAAATTAGTTCATATTTTGGCACAATAGCAAGTGGTGGGATCTT
GTGATTCTCCAACTCCACATTTCTTAGGGATGCATTGACAACTGCACTTT
GTTTTGTCCCATTCTTTCCTGAAGGGGCATCTTTGAGGTGACGTCTTGCA
AAGACACCCACATTCGTTGTTCGACCACTTAAAGTAAAAGAAGATCAgag
caaaaaatcgaaatttgacCCTTAGAGACTAAGAAAAAGAGAATTATCAG
TAATTACGCTAGGAAAAGAAGAAGTCGAATTTCCAACATACACGAAGCTC
CAAGGGGATAAaaatttacttcgaataaccgggaatT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055442TCONS_00055442Clytia hemisphaericatranscript
TCONS_00055443TCONS_00055443Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055442-proteinTCONS_00055442-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1042351..1046337 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
107.85	107.76	118.45	127.83	79.25	57.98	89.15	94.31	70.55	64.16	50.78	54.05	33.46	31.42	44.95	57.11	85.59	79.48	26.13	25.96	53.4	50.68	65.86	57.64	25.05	28.05	51.7	32.92	66.69	56.36