XLOC_034890 (gene) - C. hemisphaerica

Overview
NameXLOC_034890
Unique NameXLOC_034890
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1068843..1076979+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034890 ID=XLOC_034890|Name=XLOC_034890|organism=Clytia hemisphaerica|type=gene|length=8137bp|location=Sequence derived from alignment at scaffold_253:1068843..1076979+ (Clytia hemisphaerica)
ATTGTGTTGAGAAATAGAACAAGCGAATGTTAAGAAACCAGCAGCATAGA GAGCAATATACAGTATAAAAATACCCATCCTACACTTTATAAtagttttt tttctattatttctcTACTTGTGAGACTGCtgacaaatgttaaaataatt tgTCCGTCATTAAGCAAAGCAGCTTTATTATTGAGTACTTTTGTAGAAGT AATGATCAGTTAATAGTTGGTTACCGCTTGGTGAGGAAGTAAACAGAACT GttgttgacaaaatattttgctttggCTGGTGAAGGTAAATTCATATGTT TGTCTCGTATTTCTTTAGGGTAAAAACCAACAATAACACAAAAAGTTGGT TCTGGACTCATTTAATTGGTTCTTTATTaataaaattaatgaaaatgcga gtaaaaattcttcaaatttctttgtAAACTGACTTTGAAAAGAAGAGAGT TATGGTTTACATCCAGATCTTTAGCATCCAGACAGAGTTTCATTCACTAG GGAAAGATCAGATTCAGCAACTGGCTTTTTGTCGCCAGGTTTTCAGGCTA GGTATGGAATGGAGTAAAGAAAAAGTGACAACTGAGAGGGCCACGTTTGC TCGTAGTGATTATTAAAAAACAGACCACACCCTTTCAGCAACAAAAAACC CCAGTTTTCCAATATTTCTTCCTCTATTTTTGAACAGGCAACATACAAAA TGTTTCCAAAACCTCAAAGGTTTTCTTATTGAAAGCTTTTCAAGGAATCG TTGTTATTAAAACTTTGTCATTATTCTTAAAAGACCTCGtaatagaaaaa agttgccatAAGGAGTCTCATAaactcattttcaaaattgatttcaaatt tcgattttcaaacaaatttgtgaTAATCAAATGAGGTTATCATTCGTTTA TGCCATGTCGAAACATCTTTTGAATTGCACGACACCAATAAAAGGGGGGA AATTCTTGGTCAAACTTCCCAAAGATAACACATGGGCAGATTCGATTCTT TATATTTTGTTTCCTCCGCCAATATCTATTTTACTTACTATCTACTATTA CTTTAGGTATCTATATTTCTAGAATTCATATAACTTCCGTTTAAATGCAC CATCATAGTCATCAATACACTCGTTTTCTACTTTTCTACGTGTAGTTCAT ACAAAATCCGTTTAATGAtagaaatttgtttaaaaattttggaagctTTG AATCTTggttgaaataaaaacattagcCATAACAAAATTCCAGGCATAGT ACTTTCTTATAAGAAACCCtcaggaaatatttttttgtctacAAAACTGT GTCGCTAAGCTGGAAAGGGTCCTTTGTTAAAATAGCGTCCACCAGGTCAG TGAGGTAGGGTCATATCCTGAAATGATCTTAATGCAAAAGCTTTGCCAGG TATGGCGATTACTATTTAAAAGGGATTACATGATGAACGATGGGTGATAA GGTGCACCTCTAGGATCCAGGGTCCACCCATTGATTGGTCTGATGGGTGA CCTATGAAGACAAAATGGCACTTACTTCTATCATATAAAGTGACAATAAC ATACTATTCATGCTTGAAGTTGAACGTAAACTTTGCCGGATAATACCAAA CTTTCTTTGTTCAGAAATATTGTAGTCCTCGTATGACAATGTCGAACATT AAGTTTGAAATCCAAATAGCTGCGCATTTAGGTGGTCATTTGGCAAAATT CAATTATAACTGACAAATCGagattcaatttgaaaaaatatttaaagatt taAGTACTAGCGAAGGTCTAAGACCAGTTCACTTTTTATTTCAGATGGCA TTACAAACAATTTGCATCTCAATTCTGATTCTGTTAGTCATGAACTTGAC TTTCACGCAAAACAGACGCCTTGAAGATGAATTTTGGCAAGAGGGAGAGG GAGATTTTCCAAGAGGAGAAACTATGATTGAAAGACTCGATGATATCACC AACGAAGTCAGAGATATCAGGTATCATGTCTATGGCCCGTAGGAAACAAT TTTAATTCTTAAAGGatgcaaaaattttcaagtgtGTTTGAAACCGCGAC GAAATACTAACGTGGACATGAATATCACATCAAAAGCAAACGAAATTTAG AAGGGAAATTCTAACACAATTCCGGTTCTTCTTAGTTCCAAAAGTGCTCG ATGATATCTTTTATATGTAGCTGTTATAGCTATATAAAATGACTTGTAGA TCTTGGAAATTATAGGGAAACAGTTACTTCCATACAGCTCTATAGTAACT GTTAGGAAAACAGTTAAGGCTGTACTAAACTGAAAACATCTGATTCATTG AAGCAAAGGTGGGGGGAATTTATCATAACGATTAGAAAACAGTTACTTTC GCTAATTATATAATATGTTTTTGAGGACAACCGATCACAAAACTTTGATA TGATTTGCGTCGTATCTATCAGCAAAATAatcttatttctttttcttaga aaattctaaattttgcgCTATGGAGAGCTTTATTAGGATTCTCCTTTCAC TTTCAGTATTCTTAGAAATGATATAACCCAACAGTCATACAAATAGAATT GGATATCTTAAGTTGAAAGAAACTAGAAAGGACATATTGTATGGTGTACA ATGGTGTACAATATGTCCTTCCTAGTTTCTTTCAACTTATTCTATTTGTA TGACTTATATCAATTCTAAGAATTCTCAGACCCGCTGGGACtccttccca ctgaaaaaattggccaaaatatcgtccccagtggaaaattatacttcaat ttttgtccccactgaaaataatcagaaagaaaatcctcactgcaaaatct TGTGCTATTTcttctatccccactgaattttctgactcgaaaacaatgga attcagaTCTCAGGCATAAAAAAacataggaatatcaatccccttCGAGT TATGGTCCGTTAtgtttacccccactggctgaaaaaatcctaccgggtct gtgagaagggggtgctcttgtattttttttcaattattgttAATATCTTA CAAGTAGGAGTGTGTCTTTAAGATTTTCTTAACTTCTACTTAAATTGGCT CGTACAAATATTAAACTATCCTCCCACACACAGCTGTAAAAACTTTGCAA GGGTttcttaaaataatattttgatactTGAGAAGATTAAGCGATACTGT CAGGATCTAATCAAGGTGTGGTAATATTGGGTTCTCGAAAAAGACCGAAA AGGTAATTTAGTGAATTTAGTGACAACATGGAAACTTTCACTTTCGCAGG GAAGGGTTGAGAGATAGTCCAATAGACGAACAGTCTGATTCTTACGGAGA TAATAGCAACGATGACGAAAACTATGGAGATAATAATGAAGAAGATAACG ATGTAGAAGAATTGAAGAAAGATGCAATGATTAAGAAAGCCAAAAGTAAG TATGACTCAATTTCTACACGTTCAAATTGCGCTGTGTATAATATGCCTTA GAGGGTTTGACTTGAAAGTTTGAgttaccttattacatgaaaataGGTAC TTAACGGCCTTGAGGTTAACACGAATAACTAGGACGATGGATAGgatatc catcggcacgaaatttaaaaagtcaaatttttgcttcatttctTTTTGCT GGAGAATaattaaagttgcctatctagcccttcgggctttacagatctgt ggtgtTAAGTACGAAAGGCATGTCTTGGCCAAAGAAACAAAAGTCCGTAA AACTAGaatgaaatttcaacctttttgaggaaaaaaaacCTAAATCCTTG AGGTTTCTGTATGTCCTAGGCTTATTTGAGAAGATTTTCTCCGCATTCCT GCCTATAGTTGTTGAGTACGAAGAAAATCCAGGCTAAATTACTTCCTACG CTTTCATCGAATAATTGTTGCTATAGCAACCATCACAAACAGTGGCTAAC GGGAAGTTTGTATTCGAATAGCATATTACATTATATGTTGAAATTAAAGT CGATTAGATTTTCGATTTATTACATATAGTGGAAAACCTTTTAACTGAAT TAATCTTCTAAATTTGGTTATATTGCAGGATGTTTGTTAGACTGTGATAT CTTTAGAGAACAGGTTACGAAATGTGTCGTGTAGAAGCTAAGAAACTTTA AATAAAGCTGCTAAAACAAATTCGctatatacaataaaaaatgaactaaa tttgtttttaaagcaaAAGTAAGGTTCTCTTGATTTTCATTTCGTGATAT TGGTTAAAGGATAAGAGGCTCGAATTTTTGGGAACATTTTGAAAAGGAAG ATGCTGAtagtttgtttgttgttgtttttgggTCAATTCTTAGGTATTTT TTTCACAActttcagattaaaaaaaaatcttacttaCTCCCGTAACAACG TGGTAACCTCGATgtaatttactaattttctaTTGGATTTTGaataaatg tttatttttatttcactaAATATTACCAACAGAGTAACCGGTTCACAAAG GTTCACAAAGGTTTTCTTGCGTGTGGTACGTACTTATAATGTTgatcatg cacttttcatttctttgtaGAGGCATCAAGCAAACACATCCAGTATGAAG ACCCCAAACTAACGGTATGTTGTAAAGTACTTTTGCAGTCATTTGCAAAC CATCAACCCATATGAAAATTAGTTAGGCaattcaatgaaaataaaaatgt ttactTTTAGCAAGCGCTCTGTTATTTTAGTAGTAATACTGCATATTTTA GTGATCTTTGAaccaagaaaaagtcaaaatctatGGTCGTGCTTGTGGTA TTACTCTTCAGTATCCTGCCAACTAACTGAAATATTTACTCTTTTTCATT TACCATAGAAATACAAAGCCTTTTTGATGAAACTATCACAAGTCAATGAT TATGAAGATTTCAAGAGAACATTCAAAGTCAGAGGTAAGCCTCTAAATGA CACCAATGTTTTCGAACTAAAAACCTCCAAATAGAAGAACTTTTGGTTAG GCTTAGGGCCCGTTTACATGGATTTTCGGTACGGGGCGTACTGAAATTTT TAGGTATGGTCTACGGTCTGAAGTCCCATATCGTTTACATGCTAGATTGT TCTGAAATTTCAGTACGCCCTAACTTTCGTTTCGGTCAAAAAAACCGAGC CGAAAGTTCAGTACGGTCCAGAAAATCCATCCGGCCTGCTATAGTACTAC GACCACCCTGAACCAAAATCGAAAATTCAGCCCGCACCGAAACACCTTAA TGTAAACAAGAAAGTAACTCAGATCGTACCGAAAATAAATGTAAACGGGC CCTTATAAACAAGATACCAAAATGTTATACAACCAAAAATACATAACTAA ACAAATCACTTCAACTAAAAGACTTAAAATGGATTTCTTTCTCCTCTTTA GAACCAGTAACATTCAAAAGAACCAATCAGATACCAATGGGTAAGAAACG CCGTATAATCAATCACACTTGTTGTTACTTTGTAGAATTAAAgcttgtta aaaaaaaaagttaaatcaatGTAAGAATTGATCAAGTTTTTTAGAAGTAG AAGTTACTTTGGACTGCAGGATAGCTCCTTCCTCGAAAAGGATATCTAAG TATAAAGCAAAAATTATGCTCAGCTGGGGGTAAACTACTAGCTGCATGTT TAGTCAGCTTACctgaaatttctttcttttcagcTCCAATGAAAGTACCA GAATGCGACAAACAAGCACCGAAGCTGGTGACAATGCCGATTGACTTCAC CTCATCCACTCACTACATCTATCCGGATTGTTTGGAAGTGAAACGATGTA CGAATGTTGGTTGTTGTAAATTACCAAATCAAGAGTGTGGCGGtaaaaca aaaatcaagaaGCAAGTCAGAGTTTATAAAATTGNgctactgcaggagct tcgaaagttaaaagtgacgtcaaaaaatcgaatgtttagagcccgaaaac ccgggctcaaaacattcgaaaaagtggcaaagtggaatagaccaAAGTGG AATAggcgttaattgcgtaaaaaaacgcaggtgacgtctagtataggcta cgtattgggtggaaaattttaaaagttctcagaagactctccagtggtgc atatcatgaattagaaagattaatataacaatagcgttcagtttgaggtc gttgttgttattgaTTATTGTAGTTTGATTATTCGCCcgatagtgtcatt tgggcccgacgcgaagcggagggcgcaaatggcactaTCNAAAAATCAAG AAGCAAGTCAGAGTTTATAAAATTGATCACTGTAAGTTTGCTAAATTCCC cctaaattcatgatatgcaccactgcaatgacttcacgaatttttgcaat ttttctgtttatgttccacccaatacgtcactttttctattattgtttaa aagtgacgtattgggtagCGAGCACCTAACTAAAAACCGGGaattttcat ctcgtttcttaatagcgagtttatgtattcgagataaatcgagggcgacg gtaaaaagcaaagctgacatggagccaaaatcgccgtccactttgctcga cgacggtaaaaacaccaagataccgtcgtctgtttaggtgagcaaaggcg atatagagccgtacatgaactatcgactttgttttgtatcgactttactt accgtcgccctcgatatcctccgataaaTAAACTCGGTAATNNNNNNNNN NNNNNNNNNNNNNNNNNNagtttttttttctgacgttagtttagtctctt cgcttcaatgcaacgacttcaatccaattccgagcgggccgcaaatgact tTATTGCCCTATACCCGGGCCGTTAATGATATTTTAGCCCTCTGAAGCCT GGCGTTTTAGTTTCCTTAGCGCgggtatgacaatttgagtcacaaaacct ttcaataccgcccgccgattgaacctttaatggcttacttaatgaccgct atatggataataatttaTAATATGCGTGCCTCTCCAATGGTTTTGAAGAA TATAAACTAACTTGTTTgacgcaatttttcaaaaagcgtTCTTATAAAGG TTGAGATAGATAGTCTACACAAAAGCCTGTAGGCTTTTAGGCTTGAAAAA ACAATCTGCTATTGGGAATTGGTATCAGAGTGTATTATTTTGAAACAGAT TTTTGAAGTTTATTACAATCTTACATTCAGCCACCCATGCTGTGGATTTC CACACGGTGAGTTATGAAGATGATGATGTTTGTGGATGCACTTGCAAAAC GAAAGCCGATGATTGCAAGTCTCCTCATGTCTTGGATTCAACCACTTGTA GATGTGAATGTCCTTTGAAACCCAAAACTGATTGTGGTGTCAATAAACAG GTAACACACGCTTTTTctaagaataattttataagaacatgacgctcatt ttggccaaaacctaagaagaGATAAGAACAATTCctgatttcaaaaatgg ttaagaAAATGCTTTAAGTGATTAagtaagaacatattaagaacatttaa gcctgaaaatcacTTAAGAATTAGAACAACCGAATATCAGCCAAATTCTa caggttcttataaaaatgtacaaTGAGAATCTATTATTTTTCTAATATTA AAGGGCAGCCTATAGCCTATAGCCTATTTATATAGAAAAGCTCTATTTCT CCCAGCACTGCATCAAACAATTTTATATACTGGTTCTTAATTAAAAGTTA AGTTTTACACGTTTGCAATAACATCAATACCTTTATTTTCTCCAAGTGGT CGTCATTTTACTGCGCATGCGTGTGCACCGACAAAAATCCAACTTGTGAT CCAAACGAAGTATGGGACATCAACAATTGTAAGTGCGAAAAAGCTACTCC GCCAACCTGTCCATCTGCTACCATTTTggattccaaaatttgcagatGTC GATAATTTTAAATattgttttatgaattttataGCACCTATgaaagaaag ttgaaaaaatacagatttatagattatttttgcttgtttgttgtaaatat gttattttttatATCATGCGATAAAAGTTGTGTTGAAAAGgggaataatt aaaaaattctgTTGTCCATAGTTTCCTTCTTACCAATAATATAGTTCAGA ATATGCggcacattttttgaaatcttacaAGATATTtgactttcaatccg gcgtttgtgtgaaaaccacgcgtaCCACGCATCtcag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055444TCONS_00055444Clytia hemisphaericatranscript
TCONS_00055445TCONS_00055445Clytia hemisphaericatranscript
TCONS_00055446TCONS_00055446Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055444-proteinTCONS_00055444-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1068843..1076979 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.38 3.69 2.15 2.63 59.43 39.84 65.91 62.86 26.09 66.11 34.72 23.06 62.71 43.14 35.85 59.58 62.41 24.13 107.43 119.95 65.48 70.07 54.09 79.49 76.58 80.57 365.36 354.1 24.9 26