XLOC_034896 (gene) - C. hemisphaerica

Overview
NameXLOC_034896
Unique NameXLOC_034896
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1242522..1249115+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034896 ID=XLOC_034896|Name=XLOC_034896|organism=Clytia hemisphaerica|type=gene|length=6594bp|location=Sequence derived from alignment at scaffold_253:1242522..1249115+ (Clytia hemisphaerica)
ttttcagcttAATATTACAAAATAATTTCACAAGATGGATCAGAAAAGGA CAGATCATAAACGGACAGATCATAAAAGGGCAGATCATAAAAAAACTTGG GCAGAAATAGACAAAGCAGTTTATAAGAGTCGTGTTGCACAATGTCAACT TGCTACCTTTGTTCCctcaaattttacattttataagagTCTTGTCATAT TTTTGGGAGTTCCTCCTGGGGATTCCTCAAACGAGAATACCTTGATTTAC GTTGACATTGAAAACGGTGCATGGGAAAATATGGATGTTGATTGTAAACA GGGTAGCAGTAAAAAATCTAACGATGGACTGGAAGCTCAATCATACACCA CTTATCATTGGAACTTTTTACTTGATCCAGAAACAACACTTAGCTCATCA ACCATGGGTTATTCTAAAGAGGAGGAGTTATTACGTGAACGTAAACGACT TGTTTCTCATGGTATCACGTCATATGATTTTGATCACAAAACAGGACGTT TATTGTTTCGATCTGGATCTGATATTTATACTGTTGATGTTGCTCCCATA ACCACTGGTGCAACAAAGGTAGGGCAACCCTTATCTCTTAAGGGATATCT AACTTTTTCAGAATCAGAAACTCCTAAATAAAAAATAGCTGGTTACAGCT TTCACGCTTAATTAAAGTTTGTActattttaaatgaaattttccttaGAG ATACAAGCCacatttaaataaattttccttatttttaaCATCTCTGGACA ACTTTAGGTAAACATAACgtgtattttaaaatttcagtttGCAGCCCCAC GACTTGTTTCACCTAATATGCTTAGCAGTAAGATGGATTCCAAAATCTGT CCAAGCAATACAAACATTATTTCGTTTATTGAGAGTGGTGACATCTGGGT GTCTAACATCATCACAGGTCACGAGATGAGATTGACATTCGTGAGAAACG CTGGTCGTGATGACTCATATTCTGCCGGGGAGCCTAGCTATGTGACACAA GAGGAATTTGACAGGTTTACTGGCTATTGGTGGGAACCGTTCAAACAACA AGACATGGAAGGTTTGATAAGTCTTTGGATTATTTTAATACAATACCAAT GCATATAGTATGATGAGGTATAATGCTCTAATAAAAAAGCCTCTGAATTG AGGAAATCTCGTTAACTTTATATCATTCAATATTATGATTCtctatttga aagaaattacATTATAAATTCTCTCTACTTTTACATGTTTTTCCATAAAA TATGTATTCTTTTTTagtacattttttttgaaatataaacaATATGAACT TTTTCTTTCAGGCTGTCTCGAAGTGCACAAAATCTTATACGAACTTGTAA GTTAATTTCTATCAATTTTGATGCTATCAATAAATATCACTTTTATCATT TGCCACCAAGCAAAATAAAATGATCTTGTAATTTGTTGTCATGAATCTTT GCAattctaattcgatttttaacTGTATGCTTCAGGTTGACCAACATGCT GTAGAAGAACTCCACATTCCTGCAACGCCAGACAACAATTTCAGTTCATT CGTTGAAACATACAGATATCCAAAAGCAGGATCCATGAACGCAAAATCAA CTCTTCGGCTAGTTCAATTCTGTATCAAAAGCTCAACAAACGAGGTGaat tataaagaacttttcaaattgTAAATTGCGTGAGCTTAGAATTACTAAGA CTGATTTCTCATTAGGTTAAGTTCTTCAAATCTATTTACTTTATTGGTAG AAAATTTGTAGGTGAAATAATTCGTTAGCAAAATTTGTTTGTTGTAAAAA TTTTTGTCACTCACTCACCGTCACTTTTTACCAATGAATAATTTTCTGCG CACAAATCTTTTACCATAGTAACGTTGGCTTCTTAGTTAAGAATTAAGAC caaattgaaagaaattaaCTGAGCAATATCCTCTTTAAAAATAGTAGCTT TTTTagtaaaattcctttttcaacttttaagatctgtttttattttcttc agtTTTTGGACGGTTCAATAGTGGAATATGAACTGAGGAACGATTTGCAA GAACTTTTCCCATGGGCTGAATATATTGTTCGATGTGGCTGGATGCCTGA TGGAAAACAGTAAGAATACCGTTTGATGTCATTGCACCTAAGAAAATCTG TAAGTGGGATCATTgatgtcttggatttttttcttttctagatatGTTGT GGGGGTTCATGGGTggaacaaaattccaaaatttgagccTCAGAGCTCAA GCCGTtccgcattttgaagtttcaaaaattttgtctaaaatacagaccgg taatttacagaccagaattctAAATTGCTATAACTCCTTATTGCTAAGTA CaaatgacatgaaattttgcacagatacACAAGACcataaacattttcta aaaacaaaaacaaaacaaaaaattttatttcaagatggcggatattTGAA GCCGAAGTTTTGAACTGCTTGAAAATACCGGTTGGATTTGATTCTCAGTT ACTCCCGGCCCGAGAttcaaattgaatttctttttcagatccTGAAAGAT CAATCCTTTAActaccaaatatcaaaaatctgtCGTGGAGAATtcatttt tggctcaataaatcaattttaaagatgacctatattttccgaaaattccC TAGCAACGCCCTAGCAACAAGGCTTTAACAGGCTACTCCATGTACTGGTT GGCTCAAAAATTGGTTTTAATGATTGACAGTCCATTTCTCGACAGTCGTG ATCATAGACTGATCAAATCATTAGAGGATATTCCTCTATATGCAAAAGAT TATTCATAATTTTCACTGCCTGCGATGATATTAAGAGacatttttttaag agtcttcagggtgtgatacctcatcctcttggattttgatgaaattttga ccaaatgatctatcacacaagaaaacaagacgctgaaaatttcaccttga tatctcacgtagttttgaagatacagcgtctcaaagaaaggctactaagc gaaaattgacccctaaatttcATGAACTCTGGTGACTCNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATG AACCCCCACAacatatctaaaaaagaaaaaaatccaagacatcAATGATC CCACTTTAGATGATTCAGGGATTTTCTTAGGTGCAATTGCTCTTAAAGCA TTGTTCTTTACAATAGAAATTTGGACTtaaaataaattgaataaatttat gaatttgCACTGTGAGATATAACtattgttttttatgtttttggcaGAAT CAGTCAAGAGGTTGAGATGATGgtttaaaaatatctaaaatttcaccaag gaaaaaaaaaaagaaaaaaaaaagataactaCAAAAAAAGGCAAACAGAT TGTGAGGTTTGATCCAAGACAatcaaataattcaattttactTACCTCGT TTTCTTAAAACCTAACAGCATTTGGGTCAAAGTGTTGAATCGAGCACAGA ATCACATGGCACTACTTCGGATACCATGTTCAGCTTTTCGTCCAATCACC ATGAACAATATTGGTCCCTCAGATGTTGTGCGTCAACATAAGATTGATGT TCTCCTAGAAGAACATTCTGACTATTGGATCAATGTGAGAACTTTTCTGT TGTAACGGGTTTTATCATcctgatttgtttttttttcttcaagtgATATA TACAGAGTTTCCATTTAActtaaaacacaaaacaaaatttttgttgGGTG AGGAGTAAAAAACCGACTAGCACAACATTAATCTAAAGACCAGTATTCCT TGAGGCaagatgaaaattgatttttgttaGAGGATTAGGCAGACACTATT AAGAGTTATTTATTGAGCAGGCTCTGGATGAATGTTACACCTGTCACTTA GGCTACATAAAGCTTTAACGATTGTGCTCTTTTTTATACCATTTGGAGAC CAATTTAAGGGGGAAAAGCCCCATTATAAAGATATATGGTTACACACAAA AGACGCTAAAGGGAAGAGACTTTAAAATCTTGTTTTTCGTTTTGACAGGT GACAGATATCTTATGGTTCTTACCAACACTTCGAGAAGAAAGGCTCTCCA TCATCTTCATCTCTGAAGAATCACGCTTCAAACATTTGAATTTCGTTACC GTGACAACGGACTCGGATGACGGTTATTTTGGTATTAGCAATGAACATCA ACCACTTAAAGAGTGTGTTATACGCCACTGTCAACTGGTGGAAAAGAAAG AACTGACTTCAGGTCAATGGGAAGTCAAGGATGAGAAGGTAGACATTGAC AACCATTTTTCAATACTTTATATTGATAAAGAATCAAAGAATGCGATGTG ACTATCATCatacagccaattcgattggcttcaaaatatgtcatttttgc cctgattgccaattattttgcattcgattgacaaaaatttggcaaatgtg gcaaaatttgagtgccataaatgccaaataaaaaagatgtggtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055458TCONS_00055458Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055458-proteinTCONS_00055458-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1242522..1249115 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.28 9.19 4.49 3.06 24.44 16.21 15.67 17.4 10.81 13.93 12.06 8.74 10.86 10.37 8.23 9.49 12.2 13.87 8.41 9.44 11.87 11.83 16.08 14.83 11.71 11.98 8.02 5.69 12.75 14.57