XLOC_034940 (gene) - C. hemisphaerica

Overview
NameXLOC_034940
Unique NameXLOC_034940
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_253:1042364..1048847-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034940 ID=XLOC_034940|Name=XLOC_034940|organism=Clytia hemisphaerica|type=gene|length=6484bp|location=Sequence derived from alignment at scaffold_253:1042364..1048847- (Clytia hemisphaerica)
TGTTTAAGGCTTATAAAATCATTGTAAAAGGTCCTTCCATCATTTAACTT TTGGAGAGGTTTGATGTTAGATGTCATAGGTCATCAAAGTGAATGAAAAT ATTGAAGGGTTGAAACTTAAATTTTTATGCAAATTTTGGCAAGGCTATCA TAAGATAAACATATTTTGGTGAACTTTTCGGATAGAGGAGCAATGAGGAT TTCATCAGTTTTTGTTTTGTTGGTTTTTGTCAGTCTATGCTTGGCCAAGA AAGGATATTATCGAAAAATTCAAGATGGTAGATTCAAACCTGTGCGTGTT ATACGTCCAAAAGTTGTCACTCAGTTTGACAAAAATAAGGTAAGGATAAT CTTTTTTATAGTCCCTTCTTTTTGTCAACAAAAGATGGCACGTGGATAGA GTCGGATAGCGTAAAACCAAAATTCCTTAAAATGATTTATGTATTTTGAT GTAATTTATGTACTTAACTTCTCTGAGTTGTAAGCCTAAAATTTTCCGTA AATGTTCTTATTTTCACTATTTTGTGAGTTTTTGTGTAATTTCCTAAGAA ATTGGGTGTTCTAGAGTCCGCGAAGCCTTAAAATGAAACTTGTTCTTAGT ATTTTGTCCTTCGAAGCCTTGTTTTCTTATATAGTTTGTATAACGTGTAT TTGTTGTTTATTTGTAGATGGAAGTTGCAAATAAGATGAAGAAAGTAAAA AACATGGAAGATTTTTTGAGAGTTTTCAAAGTGCCTTATGGTAAAAAATG TTTGTTACCCCCTGTCTCATTGACAATCCCAATCCAGACAATTTCCTCCA ATGTGAAACTACATAATCTGAATCCCAGATCTCCTAAAATCTCGAGTTAT GGAATAACATTAGGCTAGTAGAACACAACAATGTTTTCGTCGTCTTCTCA AACAGGTAATTTTGAGCAATAAGAACTACGTTGCATTCTTTTCTAAAATG TTTGTAATTAAGATATTAATTTTGATTTTTTTTTCTACAGCGTGTCTCCA AACCAAAATAATCTTTACAATTTTATTTTTCAGTTAAAAAGAGACGGATA AGCCTTGCTAAACCACAAGGAGAAACACATACGTTTCTCGAAACACATAC TCTTCTCGGAACAACAGATTCTGATTCGAAACTGGAAGCTCCAGAGTTCG AATTTTTCATTAAAAAGCCAACGATCGGGAAAGAACAATCTCTTGTTGGT GAAAGCAATAGACACACGATACTGGGAACATCAGAGAAGTCTTCTGAATC TGTCAAACTCAGTTAGTAACATCTAATTCTAATTCAATATTCTCATGTTA GGCAACATTTGCGACAAAAACGGTACTCTTGTTAAATCATACGTATATAA TTAATAAGTAATCTAAAGGGGTCTAAATCTTCAAAGACTGATGGACAATC TTTCAAACTCTATATTTTTGATGCCCTAACAAAAGCGTTGTAGCAGAGGG CGACACTAGTGATCGAATTAATTCCTTGACTCGCCACGCTACCGCCTAAC AGATTTTATCGCCCAAATTTTGAAAATAAAGCAGCTGAAACAAAAAGGAA GATAGACTTATACTCAAATAAGTGAAATCTATTCACCGTTTCTCAATATT TCGTAACTTATTTCACTTCCAGGTGATGAAGATTTAGGCTGTCAACCTCG ACCAACCATATACAGCCTCACTGCAAGTCACAACTACTTCGATTACCCTT CGTGTTTCACCCTATACCAATGTGGTGGTTGCTGTAATTCAAAACCTGGA AATATTTGTCGACCGACTGAACTATCTGTTAAAACTGTATCTCACGTGAG GCTGTCATATATTACAAGTGAGTTTTTACGGTTAACTATCTTCTGAACTC CTCATGCTTAGGCTATCTATCGTCATCTCCCCCATTGTTTAGAGTGTAAA TTTCCTAACTTTCAATTTTGGTGCTGTCTATTGTGTCGCCGCCGACAAAA TCTCTTCTTACGCTTACCTAACTCCTACACTCACTTTTCTCGCGTAATAC CGTTCCAGCCCGACCGGTGTGCCAGTCTAGGGTTTGCTAAATCTGTGTAA AGAATTTTCATTAATCAATATTCTAATACTAATTTCTCCACCTTTCCCTT TAAGACCGATATACTCAAGAGACAGTGCGGTTGAATCACCACAAGAAATG TGAATGCAGGTGTAAAATAGATGCCACAGACTGTTCACAAACACAAACGT TTGATCCAAATCTTTGCACGTGTGTTTGCAGCGGACAACTACAACCTTGT GCTGAAAACAAAGTGGTAATTTCTAATTTTCCGTTTACTTTGAGGTTAAG GTAGGCCCTGAAACCCGAAAAAACATTATCGTTATTCAAAGTGAGATAGT GTTTCCATTGGATCTGCTTATCTAACTCAGGCAAAAACACTCTCGTTTAT TCGAAGCGAGTTTTATTCGCCTTGAGACAAATTACAGGCTATACTTAATC GCCCTTAGTTATTTGAACTTTTCTAATTGGGAGATGGTAGAGTGAGGACT GCGATTGAAGAATTCCCGGTTATTCGAAGTAAATTTTTATCCCCTTGGAG CTTCGTGTATGTTGGAAATTCGACTTCTTCTTTTCCTAGCGTAATTACTG ATAATTCTCTTTTTCTTAGTCTCTAAGGGTCAAATTTCGATTTTTTGCTC TGATCTTCTTTTACTTTAAGTGGTCGAACAACGAATGTGGGTGTCTTTGC AAGACGTCACCTCAAAGATGCCCCTTCAGGAAAGAATGGGACAAAACAAA GTGCAGTTGTCAATGCATCCCTAAGAAATGTGGAGTTGGAGAATCACAAG ATCCCACCACTTGCTATTGTGCCAAAATATGAACTAATTTAAATACCAAA GACGCCCATTTAACTAGTGATTCTGTGTATTAGACGAGTACTGACCATTT TATAAATTGCGCTTGTTCACAAAGAAGAAGCTACCTTGTCGTTTGGTTTA ATGAGGTTAATTAAATTTAAGGCGAATATTCTAATTGATTTACAATCATG GTCGAAATATATTGACATTTTAGTGTATTTTAACGTTTTTCAGAATTTAA AGTTCGGATGAGAATTGCTATTTTAGCAATTTTTATTTTTCGGTGGCTTC TAGGCTACAATCAAGCTCATAATATTTGAGAAAAAAGGGAAATACACCGG GAAGTTTTTGAACCACAATCGATTTGTAAGTGCTTTAAGTAGGTTGGAAG GGTAGAGTTTTAACATGAGACTTAAGACTCAAAAATAGTCCAATAAGGCT CAGAATATAGCCTGTAAGTCTGCCAACCCCTTCCAAATTGAAATATTTGA TTAAATTAAAGAGATAGCCCAAAATCGACTTTCTCGCCGGAACTTTAAAT CTTGAAAAACGTTAAAATAACCAAAATTCTCAAAATATTATGACCTTTAT CGTATATTCCAAGCCTTATTCGAGCAAATTTGAGTTTTTATAAAGATCCT AAGGTCTTAAGTCTCATGTTAAAACTCTACTTTCCAACTGTAGTTTCAGG CGCTTAAAAATCATTTGCAGTGTTCAAAATTTCGCCGGGAAATCCCCTTT GTCTCAAATATTTTGTCCATGATTGTAGACTTTCATTTTAAAATGAAATT GTATATAGACAAATCATGCGAAAAATGTAAACAAATAAATGTCCATATAC TTTAGGCGTACAAACTTTCGCGATTTTCGTGAATTTTGGTCTATCTCGCG AAAGTGAATGCATTTGAAAATTCTTAACAAGGTGATTCGCGAAAGTTTCT GCTCGCGAAAAATTCTAAAGTACGTATTTTAAACTTGATCCGTCTTCCGG AATTGAAATTTTTTCTATAATTCTTATACTGTCAAAGTTCTTGAAAAAAA ACAATAAAAACGACAATCTTTTTTGGTATTTTCAAATGTTTTTTCCACTA TAGGTATTAAAATATCATTAGTATAAAATCACTACGAAATCATTGCTTAC TATTTGTGTAATATATAATAAAGAATAAAATAAAAAATCTTATAAATTTT ATACAGCCTAATCGATATTATGCAGTACTTTCTTTGCGACTCAAGCATAC TGGTCCAAGGTTGTCACCTGTTAATTTGTTGTGTGCGTTGTGGGTACCAT CACAGTATGGGAACTGAAATAGAGAAAAATTATTTGGAGTGTCACAGAAA GAATTTAATATTTAAATTTTAATGTGTTCCTTAAATAAAAACATACATAA GTCTTGACAGAAAACGAATTCAGATATCCAACTAAATTACCAAACGGACG GAATAAGTTCCCTTTTATTTAAGCTCTGTTTTATGAAGTCCAAATACTGG TCCAGGTTGGTCTCTGAGATTTGAAGACGTTCATTAATCATAAATCCTTT CTAAGAAGGATAAAAGGCACTTCAACCAATTATTGTTTGTATGTCTTAAA CAATCCAAAATCTATTCCATTGAAAGGAGAAGGGGACATTATCGCATCAT CTATGTTTGGAAGGTGTTAGAAGGTATAGTACCTAGGGCGAATAGAAGTA TAAAAGCTTACAAAAATCGCTGGCTGCAGCTGGCTGTGCCACCTTTCAAG GAATCAAACATCCAAGCTTAGAGATTGCACTCTTTTTGTACAAGGTGCAA AGCTATTCAATGCAATACCAAAGAACATAAGAAACTTAAAAAAAACACTT CAACTGAAAAGTTTAAAAATGCCCTTGACACTCAAAAGTTGATCCCCGAT GAACCCTAAATTCATGGATAAACTGGGTGCAAGAGAGCTGATTCAAATTC AATACTTGACATGAAAAGTGTCTGCTCTCGACATTTTGATCGTACTGAGG CATGGTTCACAAAGAATCTTGCCCGGGCACTCTACTTGAACACCTACACC AAGTAACACAAGTATGTAAGTAACAAAACCATCTTACCAAATTTTAACTC AAAAAAAGGACCCTGTAAGTGTTTACCTTTTTAGATTTCCAACATCTACA GAAGGCAACTTTATCACCAAGGTCCTCTATATCATAGCTGTTCACAACCT TTGCTTTGTCAAGTTCATGAGCAGTGTTGAATCGACCTTCGCTTGCTGAG CAACCAGAGAGCTGATAAAAATTAAGAAAATAATTGCAAAGATTAAAAAA GGTGTTCTTTTCAAATTAACTGTCAGGTAAATAATAAATTGGAATACTTT TAACCCAGTGAGGGGGTGTACTGACCTTGAAGATAGACCTTTTGCTAAAA AAACAATGACAAATTAATGGTTGATTACTTAAAAGATTTTTCTTGTGTTG GTGGGATGGAGAGCATATGTTGCATTGCACCAACGCGAAAAAAACTTCTC GTGCCCGATGCCCCCAAGCCTTAAGGGTCTGATTTTAAAGGCCTAATTTT GGGCTGCACATACGGTTGTTTTTTAATCAAGTGCCTCCCTCTACAGCCCT ATAGCGTAACTTGGTCTAATGTCGACACCCCTCCTCTATAATTCCTACAC CCTTTTTATCAGCTGAAATTTATAGAAAGGTTGAAACTGTTACGACCCTG CCGGTGCACCCGACAGTCGGATGTTGTTGTCGGGTGTTTGAAGTTAGAAA TTTAAACACCCGACAGTCGGGTGCACTTTTGTCGGGTGCTACTTAAACAT ACTACTAAACCATATACTTTTCTGAAAGCCTATGATCAGGGCTACATGAT GAGCTGGTCGACTTTTTAATTTTTTACTGTCATTAATAATGCTGACGTCA TCAAAATCGCCATTTTTTGGACTTTTTTTTTATCTTGGGCGCTTTTAACA GCACCCGACATGTAAGTTAGGAATTTTAGCACCCGACTGTTGGGTGCGCT ATTGTCGGGTGTTTTTGCAAATTTAGAAATTTCAGCACCCGACAAAACAC CCGACAGCACCCGACTGTCGGGTGCACCGGCGGCGGCAGGGTCGTAAACT GTTTTTCTTTGTTTTTCTTTAGTGGTCAGAGAGGAATAATCCTTTTTCAA TCAGCGATTCAAGCTTTCATATTAGTTCTTTCTCTAAAGAAGGGTGTCAG AATTAGACGAGGAGGGATGTTGATATATTATAAGATTATTTAGATAGACC AACTCACGGTAGTACGACCGGTACGACTATAATACATGCCCACAATGCCA CATCTGATAAATTCAGGTTTCTATGAATATAAGGGACGAAACAACCACAT TTCCAAAGTTATAATTCATGCTAGAGTAGGACTACTGTAGAGCTTTTAAT TAAATTGATAAAACACCATACCTTTGGTATAACCACTTTCAGAGCCACAA AAGCAGTTACACTCCCAGCAAGAAAGCTTGCTCCTAATTTCAAGAGATCT TCTTGCTTCATATTGATTTGTGAACAAATAAGCTAGGGAAGAAAAGAATG GCAGTAGTTGTATATAAAGAGAAGAATATGAAGACACCTGAAATTCCAAA TTTGTTTTTCGAATTTGTGCACAAAAATACCTGCCTTTTCTTCGAGCCAC AGATGTCTTATAAAAATATTAGAGTGGACTGCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055555TCONS_00055555Clytia hemisphaericatranscript
TCONS_00055554TCONS_00055554Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
VEGF related ligandTCONS_00055555-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1042364..1048847 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.95 0.8 1.42 1.46 21.42 19.74 18.66 20.5 19.34 24.84 22.21 22.66 19.61 23.96 9.49 6.48 7.56 6.87 41.66 56.05 6.63 6.33 1.38 1.64 1.45 1.77 2.15 1.68 1.13 1.13