XLOC_035076 (gene) - C. hemisphaerica

Overview
NameXLOC_035076
Unique NameXLOC_035076
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_258:270120..275089+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035076 ID=XLOC_035076|Name=XLOC_035076|organism=Clytia hemisphaerica|type=gene|length=4970bp|location=Sequence derived from alignment at scaffold_258:270120..275089+ (Clytia hemisphaerica)
ATATATTATGTATAAGGTCTTTTGATATCTGTCGGGATTGCATGTTAATA ATGTTTTAACTTTTCCATTAAAGAggttttttcaccattttcatGATATT TGTATTTTTACAGCTTTTGTAGCTTATATCATCATAATGgcctcaaaaaa aaagtttaaatatgatataccaaaaataaaaaatatgtgtcAAATATGTT TTATTACATCTTCGAAAAAATTCAACATAGAGAGACATATGGACACAGTT CATGCTTCATTAATGTCACAAGATGTGAAAAGTAATACTGATAATGCAAA AAGCAACCTTGATATTTCCATCAATGATTATGATGGTGATTGCAATAATG ATAAATTTAATGAAGAGCAAACAAATGACTCATTGGATGAACAATCTGAT GTGTATGATGCATCCCATTCACATTCATCCAAAGAAACTGATATATTGGA AAACAGTCATGACACAGATATGTTCCAAAACAAGGTCATTATTATAAAAA CTCTACACTGATTCCTTACAACCTCTAAAGAATTGTGTGTACTTTCTATG ATAATTTAAACCTTTACAGCCATTTTTCTGAATCTCTTTGTTTTTGTGTT AGGATGGAGAAGGATTTCATTTGAGCGCAAAGGATTTattacaaaaaatg aaagaaagtatGCTAGCTTCAAAGGCAGCAGACTCAGGTTAATTTTTTTG ATCATATAACTCTCCTTTTTTTCACAGGTCCCGTACTTTAACAACTTCTG TTTTGTAAATATATGTTACCTACAGACTACAGTGGGTAGAAGAAAATCTC GGCTGTAGGTTTTTCTGGGTTTTTAAAGCGTTAAGATAACATTTTTATAA GGAAATTTTCCTACAATAATAATGGAATGCTAATTTTCTTTAATATTTAG ATTCTGATATTTCTGATTCTACCTCTGATGTCACTACCAGTGAAAGTGAA TCCAGTGATGATGATACTCATTCAGACAGTgatctttcagattatgaaga TGATTGGCTCTTTGATGAGTCACCAGGACATTCAAGGCTAACAAAGAAAG ATCACGCTGCTATAATACTTGGCCTTGCTTTGAGGCATAACTTGTCCAAC GAGTGTTTAAAGGATATTTTATTTGCTCTTAAACTTCATTTGCCTGATTC TAATCGAAGTTTCTTGAATCAATACAAAGTGAAAGCTAGTATTTCTGGGA TGAGCAGTACACTCAAATTTATCGAATACTGTGAGAAATGCTTTGCATTA TGGCCTGAAGATGAAAGTGTTTCTAAATGTCCAAATACTTCCTGCTCTGG GTAGGTGtcaaagaactttttgaaaaacagtttTATTTACATTAAATCAT GTCTGGTTTCTCTTTTGTTTAATAAATGCAAGCtttgaattcaaacattt tTACAATATAGTTTCATCTTTTTAGCCAGCGATACAGAGGAAACCCATTG AAGAAGGTCAAAAAGAGTTTTATTTTGACATCCTGCTTATTAAAGGAACA ACTTAAAGCTATTCTTGATAGTAAGTTTAGACTGGCAAGCAGAAGCTTTT TtaaatacatcagaaaaatgaagatgttcTATGGTACTAGCTAGACAATT GAATTGAactatattttattattttttcatgcATACATAATTTAATCCTA CTCTAACTCATTACTAACCTTAcgtcattaaactcactctgtgTGTTGTT CTAATCAATCTTCAATATTGTTGATTTCAAGGAGATGgaatgtgggaaaa agttcttAATGTAATAAAATCAAGGGAAAGTAACAATGGGGACTGTATAA CAGATGTGACTGATGGAAAAAGGTATAAAAGCtgtttctttttatcattt tatccaAATAATAGCTACAAAGTGgaagtgagaaaaaaaaaatagacgTT TTGACCTAAATGTCATTaaataaatttgtgtgtttttttagATATAGGGA GCTCTGTCAGTCTGGTGGTGTACTTCATGGAACTGAAAATCTAACTATAA TCTTTAATACTGATGGTGTTGCCTTGTACAAATCATCGAGAATAGAAATA TGGCCTGTGTATGTTGCCATAAATGAAATACCAGCCAAAGAAAGGTGATC CTTTTTTCACTACCTTCTCCTTCTTTCTTCTACCTGCTTCTATAAGATTT TATTTTAGCCTTCATACATATTTTTActgatttattttgttttttattta ttttgcaatCATTAGTGGTATACTTTCAAAATTGTGATGTTGAAAAAAGT TCATTGCTTCCTGTTGCTTCGTGTTTTCTAGTTTTATTTGTATGCTAGAC ATGAAACTGTTTTAAAcatcattttgaaataaattcatTAATTTACTCCA CAAAGTTATTGAGCACTCTTTTAAATGGTGTTCGGCAACAATATTTTAGT GGCATACTGCTTAATATATCAATGCTTTTTGTTAGGATTGATGTTAACTA GTGGTAAAAGAATCAAGTTCTACACCTTAATATCAACAATGGACTTGATT GCAAAAGCGCAAATCTTGTGTATGAACCAACATAACGGCTTCCATGGTTG CTCAACCTGCCTTATCAAAGGAGTTCATGAAAACAATGTTCAAGTATATC CATATTCAGAAGCAATCGATCAGAAGAAAAGTGCAAAGAGAAATGATGAG AAGACTTTTAATGACGCCATAAAAGCCATCTCATCAGGACAAAAAGTAAC TCATTCACATTTAAAGTATTATCATATCCTTTAgcttgcttttctttttt tatctttcattttaagtattttatttaaaaaagacaTAAGAGTATTATTG TATTACACGTAATCTTTTTAGGTCAATGGTATCAAAGGGCCATCTTCCCT TCACCTTATACCAGAATTCAGTATAACAGACGGTGTTGTCCCTGACTACA TGCATGGAGTTTTATTGGGTGTCGCAAAGGTCTTAGTTGCATGCTGGTTT GACCCCTCAGAGCATAGAATcttttataaagaaaacaggacATACCCAGA ATATTATATTGGACACATGGTATGAATTTAAACTAatgaaaattatgttt ttctcaGATATCTTGCTTGCCGCGAGAACAGTTTTTTTAATGTTCTAGCT AATTAACCTTTGTACACAGTCATAAGAGACTTTGAATTTTATCTAACTAT ATCCAGATTCATGATGTAGATGTACGATTAGAAGGTATGAGGCCAGTGGA TTATATATCACGCAGACCAAGACCACTGTCTGGAAACCTCGGACATCTAA AAGGTTTATAGTAAagtacttttacaaaaaatgataaACTTGTTCTTTTA AATTCGAAATTCCTAACTACTTTTATGATAATgggtttcttttattttca tgatGTAATAACATTAGATCTTGAAAAAAGCAACTAACCAAACTATTCAT GGAAAAAATGATTTATTGTGCTTTTTTTGCCTACATTGTATCATTATTAT GTTGTTCTAGCTAATGAATTAAGAACTTGGTTACTGTATTATTCGCTACC CTGTTTGGAAGGTATACTTTTGCCAATCTACTGGAATCACCTAGCGCTGC TTGTAGAAGCAACACATATTTTGCTTGGCGAAAAAATCAGCAAGACAGAT TTGGAATGGGCAAATGATTGCTTACAACTCTTCtacaaatattttagtga attttATGGTATGATTTTTAAAACTCATTTGCAAACCTTTTTTTACCATA GAAAGCTCTCTTCTATTTAAagcattttataaaaattttcatttttgatt attgtAATGACTGAATCGTTTTATTaatagaaagaagaaaaagtggATTG AATATCCACAATTTGATTCACCTTCCACTTTATGTTGAGTACTGGGGACC TCTATGGGCATATTCATGTTTTGGTTTCGAAAGCTTGAATGGATCAATTA TTAAGCAGGTCCATGGAACGAAAAATGGTAGTACACAGGTAATTCTATAA AGGTCACGTCCAAACCGTACTCTGTCCTGTCCTGTCAGAATTTTTGTATT GAAAACTGACTTTCTTTTAGAATTTTGGTTGTTctcatttgttgttgttg atattTAATGATGTTAGATACTCTACAATTTGTTTCCATAGATCATTAAG ACTTTCAATGCACTCAAAGCAATCCATATCATGATGCAATCACAAAATAC CAAGGAAATTGTGCGAAATGCCTTGTCATCCATGCTTATGAAAAATCGTA GGTTAGCAAATTATTTATGTCTTATCTTTGTAAGTATCATAAACTATATG CACAGAtttcaaataatcaaaataatgtTTCTTGattatttgaatgtatt ttttctACATTAGAAACACAAATTCCTGGAAAGCTGTAAATGAAAAATGT TCTGTTGGTGGAAAAGCAATGCATCTTGATAAGCAAGAACTTGAAAAGTT CAAGTTGAAATCacattgtaaaaaatatttgcaGCTTAAAAAAAAGGGAG TTTATTTCACCTCATATCAGTACAAGCGTGCCGTTAAAACGGTTAACTAT TTTGCTATGTGCCACAAGGACGGAGAAAAGGTCATTGCAAAAATTCACTA TTTCGTTGTTGATGatgaaaaagtatatttttgtGCACAAGAAGTACAAA GAAACAGTGAATGGAAAGTTGTTCCACAGTGGAATCGTAGTTGCATCATT AGAATCGAACCTAATGAAAGGTTAGAACATTTGATTTTGCTAATTCttta ttaaatttaaaaaaccaAAATGATATGAAACAAATTTAAATTATGTATCC TTTGTATTCTTTCTTTACAGTGCTCCACTGTTTCTCGCACCATCAGATTT CCTCAATGAAAAGCTATTTTTAATGGATGGCAATTTGGATTTTATGTGCG TTTGCAAGATTCCTAACACAGTTGAAGGAGATTGATATAACAAAGATGTG TTCTATTGGGTTTTTCACTAGACTTTTGTAATCTTCTAATTAATAatgta atttgtaaaatatattgGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055727TCONS_00055727Clytia hemisphaericatranscript
TCONS_00055728TCONS_00055728Clytia hemisphaericatranscript
TCONS_00055729TCONS_00055729Clytia hemisphaericatranscript
TCONS_00055730TCONS_00055730Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055727-proteinTCONS_00055727-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_258supercontigscaffold_258:270120..275089 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.86 2.79 1.42 1.59 13.88 10.69 16.28 18.06 16.92 17.74 13.27 15.26 18.97 17.79 11.67 16.23 12.81 16.16 10.74 10.91 12.51 10.95 5.91 7.64 14.76 15.44 10.26 6.85 11.14 8.08