XLOC_035210 (gene) - C. hemisphaerica

Overview
NameXLOC_035210
Unique NameXLOC_035210
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:32202..37116+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035210 ID=XLOC_035210|Name=XLOC_035210|organism=Clytia hemisphaerica|type=gene|length=4915bp|location=Sequence derived from alignment at scaffold_266:32202..37116+ (Clytia hemisphaerica)
TTTAGATTCAAAATGgtacaaagaaaataaatcaaaatatattggAATAT GTGGTTGAAGCAAGCTACTCATTTTCTGGTATTTCTGCAAATCTTTGTCA ATATCATCTACGCATGCCCAGCAGATTGCACGTGCTATTTGACCTCAGTT ATCTGTCAGTATAACTTTCTAAAGAAAATACCGAATGGGATTCCAGAATC GACGACCAAGTTATATCTTGATGGAAACCAAATAGAGAGAGTTGAAAGAG CTGAACTATCCAATTTAAAAGATTTAGAACTGTTGAGTATTGGGAGTAAT ACCATAAGTTTTATTGAGGATGATGCTTTTCATAACTTGACAAAATTGAC CAGTCTACATATCAACGACAATAAACTGACAAGaatcaaaagaacttttt tcaGCAACTCGCCGTTATTAAGGCATGTTCGAGCTGATCGCTTATCACCT AATGCTCCTTTAGAAATTGATGATCACGCTTTTGAAAATCAACAAGATCT AGGTGAATTAAATCTAGCATCAAACAACATGGTTCGAATCTCAAATAACA CTTTTGCTGGACTCTCAAACTTAAAGCATTTGGATATCTCCGATAACGAC ATCCAAGTTTATTCCTCGCACGCGTTTACACCTTTAACAAGCAGTCCAAC AATTGAAATTGACGATGGTATTAAATGTTGTTGTCAAACCAAGGCTGCTT TCACCGCATTCGGGATTTCTCAAACGTGTATTAATCCAGAAACAAACCAA CAAGGAGATATTGCATCGTCGCCATGCACTGATACAGGAGTATGTGGAAG TTTTAGAGAATCGACGAGTGATCTTTGGCCCCCGATGCCGCCAGAACCTA CGACATCGGTAACATTTGCATCaccatcatcatcgtcatcatctTCATCA GTAGTTGCAACAAATATTGAAAGTTCATCATCACCAAAATTctcatcttc atcatcatcgtcaACAAGCAGTATTCTTCACAATTCCTCACCATCACCAT CGAGTAACATTGTGAGCTCATCAATGAGTGAATCGAAATCAGTTGAGATA CAGGTGTTTCAGACATTGCTGACAGACTCGGTTTCTGATCACGTTTACAC AAATCACATAGATTCAGCATCATCTTCACCAGGTACAATAATGCATTCGA TCCCTTCATCCCACTTAACACAAACAGTACTTGCAAATAGTGATTTATCA GTTGTGAGCTCTAATATGATTTTAAGCACTTCAGTATCTTCATCGAATAG ACTTCACAAATCAAAATCTAATTCGGTATCTGAGAGAACAACACTATCAA GCACAAATGCATTTCACACTGAAACACTGAGCACTATGACAAAATCCTTA CTGCACGAATCAGCCATATCACCAAGCTCAAATTACGAAATAAGCACAAA TGTACTTAGCACCGAAAGCACGATGGCACAATCTTCAGAAATCTCAATTT ATTCCCCGTCAATGTCCGATTCATACAATCTCCGGCCTGTCTCTTCCTCA CTAGACATGTCATCAGTAATTCCAGCAAATTCAATTGAACCAACTCCCGT CTCAAAACTGAGCGTACCGTCTACTTCTATCACAAACTCTTCAATCATTC CTCAATCGTCAGCAGCTCCAGTGATCTCTTCTGAATCTAATGATCATACA ACAGAGATACTAAATCACCAATATCCTTCAACTGTTAAACCAAAGCTCGA AAGCAGTATGTCAATGCAAGAGCCTGACTATCAGACATCTTCCAAACACC CTCATGCAATGCCTTCAATCAGCAATGATGTTGACCAAACCACCCAAGCA GGGACGCTTCAACCTTCCTCTAACTATCCTTTGGAAGTATCTTCAATAAT TATGTTACATACCATATCGCCATCGCATTCAGTACCAACACTTAACGGAA CATGCAGTGTCTCGACGTGTAAAGCAGGTTGTGAATTCTCACAACAACAT TGCCAATGCTTCGAAAAAGGTACTTCGAAAGCCTGTCTTATCACCAGTAC GCTAGATTCTCAAACAGGAGATGAAAACTCAATGGCAGATTGGCAGATGG CAATTATCATTGGATCGTGTGTCGTTGTCTTGTGTTTCATCGTCTTCTTT ATCTATTTCAAGAAGAAACAAAGTCGTGAACGACAATTTAACTTGAACAC GTCCCGACAAAATATGGCGATGAATGACAGTCCTCAAGGTCGTGACAATC GTATGTTTATTATTGAAGAGACAAACGAGGCTGGACCAGTTAATCGACCA ATTGCAGAAATGTATTAATCTCAGCGAGAAGCGGCGTTAGGACATCAATA ACAGTGAATGTTCTCCAATGAACAACAACATGCCACCACTAAAGACTTAT AtaacgagaaaaatatttgattgcTAGTGAGAGCTATTCGATGTTTTGTA TTATAATTTCATTACTTATTATGAGTTTTTCAGGGTTTTATATCTGGTAC TGGAAGAGGGTCATGCAAATAAAATAAAGTACAGGGGCGAGTTACTGGTA AGGATcccgttttttcaaaatttcatttaaatggGTCCAAATTTAGTCTG TTACTGACGGTATGTAATTCTTAGGATTTCGAAATTGACTTGATTCTTGA CCGTCAAATTTTGTTTCCCAAAGGAGCTCTAGAAAAAAAGATCAATATTA AGCCAATACatgtctttttataagcatacaaaaatccaaagaCTGACTCG GAGATGCTTAAATTGACAGATTGACAAGGCTGAAAAAAGCTTGATGGATg ctatatttcaagcaaaattttagggaaTTTCCAAAAATCCGTAAAATCCC AGAAAAAAACAGCGAAAATCTAGGCTCAGGTAATGCTTAACAATTGCTAT ATCTGAGCCTCGCTATGCTTATAAGTacaatgcttataataaaacatgta tcattttgtatttgtaagcattaatattttatcttttgttcTAACCGTAT TTGTACAGATTTCTAATGCACTGTTATATAAAAGTTTGTATAAAATTAAC TAAAAGTCTACATTAAAAAGTTCAAAGTGTATTCACATATTATACAATTC ATAAAACCGAATGATCATTCAAACGTACTTTACTCGAGTCTACTCAACTT GAATCTCCATTGCTCGAATGTCTCCACCGTAGCTTGAATGGTTTTTAATC CATTGGGATCTAGTTCCCTTTAATTTAACATTTAGCATTTGACTTTCAGA GAATCGCCTGTTTGACCATAGAAATTGACCAAAgttttgaaagatcttct atggaAGACAACTTCTGCTGGTAGAATGGTCTCGTTGGTGACATCACTTT TCGGGAGAATTTTAGGCTATCAGGTTTCAACCCGATCAAACTTTATATAA TTTATCCAAATAATTCAAAGTCAATGAAATTAACTTGCTGGTGTTGAATG GACCGATTTCTTATGCATTTGAAGGTTAATATcaaatttaaagaatttct cGCAGATGTCACAGAAGCAAAGTGAACTCTTTTTACCAAACAACAGTTGG TCATAAAACATTCTATTCCCATTTTTAGTTCTGTCTTTACTGTCAATATT CATAATTTCAGAGTTATGTCTTGTATTCAGTTTTGAGATCTGAGACTTTG AGTTCTCCAAGTTTAAAATCGAAATCACATTTGAATCTTCTGTTCTATCC ATGTTATGGACTAAAATGATATGTGATTTCAAGTTTGATAGATATCGAAA AGACATGCCACAGGAGGAGCATTTATATCCATTAGGAACAGGTTCTTCGT CTATTGCCCACAGACCATTGCAAGACTGAAATCGTTTATTCCTTGGAGCT CCATATCTAGTATGTtgctgttttttgtttttgatcttCTTGAAGCTCAG ACCGATTTTTTCGTgcgttttctttgattttgctgCTTGTTTCAACAAAG AGGCTTCTTTTAAATGtctcattttgattttgaaatcttCGGTATCtgtt ttatttggtttattcATATTGGAGTCGTGCGTTACTTTCTTTATAGGGCT TTGGAACAGTTGTCTTTTTACTGTTATTGGGTCTATTGCTTGTCTGGTTA CCGTTAGTTCGTTAGATTGATTTTCACTTCTAGTGCTCGGTGAAGACTCT GAAGATGTTGGAGGAGTTTCTTTCTTCTTCGTCGATACCCTTGGTGGAAA ATTAGACGCAAGATTTCTTGATTTGGGAGATTTACATTTTGTCGTTTTCT GGTGTTTTAAAGAAGTTGATAAGTTATGTTTCGGAGAGactgttttattt ttagtttgactTGCATCGAGTATGTTTTTAAACCCGTTTGATGATCCGAT AAAGCTTGGACTTGGTACACATGTGCAATTTGTATCAATTGCTCGGGAGA GTAAAACATTGCTGGTAGTTTGGGGATTGGCTTCAATTGAtagtttttca aaacttttatgtAAAACGTTTATGTTACTTTCGTCCAAAGTAACATTGGG GGATTCAACATTAATCAACAATTTTTGAGTAACTTCTTCGTCGAAAGTTT TATCCAATAACTTTAGGCAATGATCTTTagaattttgatcaaaaattttc agaacatcTTCATGAACATTTGAAAGCGGTGTCCTGGTGCAATCATCGTC GCAATCTTTATCAAAAAATCTGTCACTTCTCTTAAACATATCTTCATTTT TGTTCATCAACGAATGTTCATCTTTAGTCAGCAATTTTCGAACATCTTCG TCTTCATTTGTATCCAAGAAAATATCGACGTCAGATTCAAAACCATCATC TTTGGAATGATCAACATCATTTCTGATTTCATTGAAGATGAATGCTTGGT GATCCTGACTCATGCTCAGGCCATCAACTTTAACGTTTTTGTTACCGACT GCTGATTCGAGTGAACGATTTGATTCATTTTCCGAATCTTCagtcttcat ctttattcatattct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055914TCONS_00055914Clytia hemisphaericatranscript
TCONS_00055915TCONS_00055915Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055914-proteinTCONS_00055914-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:32202..37116 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LRIT3leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.01 4.49 4.27 4.03 3.7 2.58 4.17 1.77 1.32 0.41 0.67 20.08 42.94 3.29 4.74 3.31 3.12 1.3 1.74 2.1 2.56 0.8 0.49 0.23 0.18