XLOC_035215 (gene) - C. hemisphaerica

Overview
NameXLOC_035215
Unique NameXLOC_035215
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:182945..194194+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035215 ID=XLOC_035215|Name=XLOC_035215|organism=Clytia hemisphaerica|type=gene|length=11250bp|location=Sequence derived from alignment at scaffold_266:182945..194194+ (Clytia hemisphaerica)
GTctagagaagaagaagaagaagagaaatGAACAGTAAAATATGgcagat gattttttatttcttgatGGGCGCATGTCTTACTGAGGCTGTACTCAACC CAAATGGGTGAGTTTGATTTTCCATTTGTGTTGAGACGGTCTAATCGACA TGAAAATTCATATGATGAACAAAGCTAACAACATTCAACTTTCTGCATGA TCATAATATTTTCGTATTGATATCTTTTTGGAATTCTCCCGATTTTAACT TTTACTTCATTGTTTTACAACAGGACTCACGTTTGTAAAGAGACTGGAAA CACCACTGTTTGTTGTAAAGGTTGGAAACAACAGGGCAACGCGTGTCCAT TAGGTGAGTTAAAAGTCGGGCTTCTCTAGGCCATTCCCCTCTTCATTTTC CGAGGTTCACAGCCTCCTGGACCTCTAGTTTAATAGctcatttcacagtc gcaaagcgtaatgggtaatcaggagcactgcgcgctaatgacgacttact attggtccaaagttttgaaaatttttgaagatttttgcgtctagctaACC GGAAGTCGTTATTTGAGCTCAACAAGTCCTGAtgacccatgattcatttc gactctGAAATGGGAGAAAGACCACCTCAAGATTCCCAAGTAGTTCAAAG GAATGAGGATATTCGAAGTCGTCACTcgccctggatatcctctcttgtAG GCTTTTTGTTataaaacattgaaacaatataagattacatgtacaaaatt aaatttcttcATTCTTATAAccttttttaaccgttttagACATCGACGAA TGCACAGCAAAACCATGTcaacaaaattgcaaaaacacTGCTGGAAGTTT TCAATGTTCGTGTAACGTAGGATACAAAGTTGACCCTAAAGACTCTTCCA AATGTTTGGGTGAGATTTTCAATGTTATAAATATTTACCCACACTCAGTT AATGAATCGAGGCTACACATTGGGAAGGGCCTTTTTCAGGGAAGGGTTAT TAAAGTAAACACTCGATAGAAATACCGAGAAAAATCGCGaaatattttat ctttcttTCAGATATTGACGAGTGCACCACAAGTCCATGTCAACAAGATT GTAAAAATACTGCTGGAAGTTTTCAATGTTCGTGTGGAGTGGGCTACAAA GTTGAtccaaaagatttaaaaaagtgCTTGGGTAAGATTGTGTAGGAATG TCTATAACTGAGACTGAGTAGTTTAATATTTGTTAACATAGCCAtttaga caaaaaaaattaaatatgttATGCTCTGGCAATCATCTTTCTATGCTCTG AGTGAAGATAGCTGGACTGGActaaaacagtttttttatctttttaaata ctAGACATAGACGAATGCACAACAAAACCATGTcaacaaaattgtaaaaa cacACCTGGAAGTTTTCAATGTTCGTGTGGAGTTGGTTACAAAGTTGACC CTAAGGATTTGACAAAGTGTTTGGGTACGATTTTAAACGCACTTAGTTTG TAATTATCTTACAGCCCTGCAAAGGTAggctaaaaaacaaaaataggcAA ATCAAGCCGCTGCGCTTTAATGGGTGTTAACTCTCAATCCAAGAAAGATG GAATCAGCAATCCTCGATATTTAAAGATAAATAGAAATTCTAGACTATCT CTGCGAAGAGGTATTGCTTTCAATTTACAccctttttctttcaagaatGT CAAAATGTGTGAACTGCCATATTTAGTACAGACTATAATCTCTTTAATTT TCAGACATCGACGAATGCACAACAAATCCATGTCAGCAAGATTGCAAAAA TACTGCTGGAAGTTTCCAATGTTCATGCAAAGGAGGCTACAAAGTTGACC CCAAAGATTCTACAAAGTGTTTAGGTAAGGGTTGATCCAGTAAAGTTTCT TGTAGTAATTTCTTCAATTTATTACCTTATCGTACTATGAAATGTCATAG GGTTGATCGTAAAGATTTAACAAAATGTTTGGGTAAGTTCTTAGCTTACc cattataataaaaaatcttACCAGTGAAAAGAAAAGCTCGAGAATTGATA AATCGAAAAAATAGGAGTTTTCAATCACATTGACCCCTTTCTAACAGACA TCGACGAATGCACAACAAATCCATGTCAACAAGATTGTAAAAACACTGCT GGAAGTTTTAAATGTTCGTGTGGAGTAGGCTACAAAGTTGACCCCAAAGA TAAGACAAAATGTTTAGGTAAGCCTTAATTTCACAAGACTATTTTTGAAA TACCATTATCTGAATGAGATGCTAGACAATCGGATGAAAATTATATCCAT GATGATGATCCTTTATCTATTAATTTCTAAACAGACATCGATGAATGCAC AGCAAAACCATGTCAGCAAGAATGTAAAAACACACCTGGAAGTTTTAAAT GTTCGTGTGGAGTAGGCTACAAAGTTGATTCTAAAGATCCCACAAAGTGT TTGGGTAGGTATTACGCAACGGGTTCATGTTTAACAATTTTCATACCTAT CTTTCTAAGTGACATCCGAAGTGATAtccgaatgaatgaatgaatgaatg aatgatatTCTAAGCTTTCCTTCATACTCCCTCAGACATCGACGAATGTT CAACAAAACCATGTcaacaaaattgcaaaaatacagCTGGAGGTTTTCGA TGCTCTTGCCGGGAGGGCTACAAAGTGGACCCGAAAGATTCCACGAAATG TTCTGGTAAGTGACGGAGAGAGTTCAGTACGTAAATTGTGATTACCCTTT TCACGTAAATAAGTCagatcacgcatcacgcaaaaTCGTTGGTTGCTCGT TTGGAAAGACTTAATCCATGTTAACAGTAAGATGAAAATTATATCTATAA TATCTTCTTTATCTATTAAATCCAAACAGACATCGATGAATGCACAACAA ATCCATGTCAACAAGATTGTAAAAACACTGCTGGAAGTTTTCAATGTTCG TGTGGAGTTGGCTACAGAGTTGATCCTAAAGATTTGACAAAATGTTTAGG TAAGCCTCAATTTGACTTGAGTATTTGTGGAAATCGCCATAACTTAAGTG TAGTAACAAAGGTGTGCATGTGgatatttgttctttttcaaatttaccgA AAAAGTTTCCAGAAGTTTCTGACAGATGTTCTCCTTAAAATACTAGAAAA TCCTACTTTTAGTCGGTTCAAAGTACAATAATTTGTTCGTTCTTTTAGAC ATCAACGAATGCACCACAAATCCATGTCAACAAGATTGTAAAAACACTGC TGGAAGTTTTCAGTGTTCGTGTAGAGTTGGCTACAAAGTCGATCAAAAAG ATTCAACAAAATGCTTAGGTAAACCTTAATTTCACAagaccatttttgaa atacCATTATCTGAATGAGTACAACTAAGACCAATTATAAGATTTCCCAA TAAGTTTCTGACAGACTTCAAAATACTATTTTACGGACGGTCATACAATA CGCAATTTTTCTCTCTCAGATATCGACGAATGTTCAACAAAACCATGTca acaaaattgcaaaaacacTGCTGGAAGTTTTAAATGTTCGTGTAACGTAG GCTACAAAGTTGACCCCAAAGATAAGACAAAATGTTTGGGTAAGTATCAA TTTAACATGAAGTATCTCGGAAAAGTAACGATGTTGTTAAATCAATGACT CGAGCCAAGCCATTCATGGGTTTGTAATTTTTACCTTTCCAGAAGATTCT GATGTAAGCTTTTCTATCTAACACGAAATTGTTCTACTTTTCACTCTTTT AGATATCGATGAATGTACGACAAAATCTTGtcagcaaaattgcaaaaata ctgCTGGAAGTTTTCAATGTTCGTGTAAAGATGGCTACAAAGTTGACCCT AAAGATAAGACAAAGTGTCTAGGTAGGTAGTTAGCAAGTTAACTGTGTCC AGATCAAgtttaaaatctgaaatctgACTGAATGATTTTCCCATTTGAAT AAAGAATTGACGATTATACATACAAGCCCCTCTCTTTATTCTCTTTCTTA GACATTGATGAATGCACAACAAATCCTTGtcagcaaaattgcaaaaacac TGTTGGAAGTTTTCAATGTTCGTGTAGAAAGGGATACAAAGTCGACCAGA AAGATTCGACGAAGTGCTTGGGTAAGACTTTGACCAAATAAAATTCGAGT CGAAGTAAttcttaatttcattaaaacgCTTTACTACTTATTGTCAAAAT GTCAATCTAGATTGATAAGGCCACATCTGTGGGTGCTAATTCCATGACAA TAACATACACATCGACCTTCATCGTGAAtggactttttttctttctcaga CATCGACGAATGTGCNAATAACATACACATAGACCTTCATCGTGAAtgga ctttttttctttctcagaCATCGACGAATGTGCTACAAAACCATGtcatc aaaattgtaaaaatactGCTGGAAGTTTTAAATGTTCATGCAAAGTGGGC TACAAAGTTGACCCGAAGAACTCCTCAAAATGCTTGGGTAATAACTTGAA TTTAAGGCCATAAGAGTAATTCTTtgcactttaaaaaaatacctcacAGT AAATCAAGATATTTATAAAAGATAACCCGCACTTTTACTGTTATTTCAGA CATCGATGAGTGCACAACAAAACCATGTCAGCAAGATTGTAAAAATACTG CAGGAAGTTTTCAGTGTTCGTGTAGAGATGGCTACAGAGTTGATCCTAAA GATAGGACGAAATGCCAACgtaagaaatgagaatttttctcGGTTTTTGC CGAATTGAGGTTAAAATTTATCTGAAAACTGACTGTACTAAAGGACAGCT ATCTTTATCATTAAACATAATATAAACATAATATAAGCATGAAATTTCAT AGTagcaagaaaaaaaacaaatcaaaacttaaGGATGAATTTCATCCACT CATTCAATTTCAGCCACTTGTCTGGAAAATGGATGTGTTCAAGGTGTTTG CAGTGCACCAAATTTTTGTGATTGTCATCCTGGATTCGTTGGCAAAAACT GTTCGAGTGGTAGGTAGACTTTTCACGGACTTTGATATCAGAGAGCGTAC AAGAGACTCTTTTTTACCATTCAAATGTCAAATTCAACACACGAATGTGC AATAAAtgaaaagttgacaaaattTCATACCAACAGTGGAAAACATGAAA TTCACAAAAACGAACAGAAATATCGACTACAAATACACCCTAAACAAATG AAACTAACAATATTTATTTATGTTTCATAGAATGCAGCGAAGACACTTTT GGCAAGAACTGTTCACAAATTTGTTTGTGCAAGAACGGCGCATCATGTGA CAAGGTGAACGGTTCGTGCACTTGTACACCGGGATGGATAGGTGAATTTT GTGAGAAAGCATGCGAAAATTCTTGGGGACTTGGGTGCGAGAACAATTTC ACATGCGTGGCCAATCAGACACGAGCTACAGATCACGTGACAGGAAGATG CGAGTGTGAAAGAGGATATACTGGCATCAAGTAAGTTTGAGAAAgctaaa tgaaaagaaagattgCACCGTTGTTCTAGAAAATCGATGTATCAAATAAT AACCCAACATAACAGCCAAGCAAGTGTACTCTGCACAACGGTATAATATA AAAACCGAGCCCATTTGAAAGGTCACCTAGGGATGACAAAACCTATGGTA TTAGACAACCTCAGTTAGCaatgtatttacaattgattGTTGTTATGGTT TGAAGccatttttcaaagttcaaatcttaaaaacaatcaAGCGCTATATT TCACCATTTCTAAGCTTGTATTATATTTTCAAGCAGTGCTTAAACCATTG AATTTCTTTTATCTTTAGTTGTGAGAAGAAATGTGCTCAGGGTTATTACG GAGAAAGATGCAGATCAAAATGTGGATGTATTTCAAAGAATACCTTAGAT TGCAATCATGAAAGCGGAAGATGTTCTTGTAAGATTGGANCCAAAATTtc gcttctaaaatcggacccttacagtgcagtgaatttccatggaaaatcat acccttacagtgcactttttcaaaaatgttcgcccttgcaattttccaag aaaatgtggaatttttcctccaaaattgaccaatttagtgccaattttac caaaaaattggccttttatcacaatttcctacccttacagtacagTTCAG Tgcatttttgtaatttcccttacagtgcacttagcttaactatgaaaaac ctacccttaagggccgaacgtctggtaggtcatttaccttgagtgccccc acCCCCCGGAATATAAAAACCGAGCCCATTTGAAAGGTCACCTTGAGGGA TGACAAAACCTATGGTCTTAGACAACCTCAGTTAGCAATGTATATACAAT TGattgttgttatgatttgaagccatttttcaaagttcaaTTCCTAAAAA CAATCAAGCGCTATATTTCAccatttttcactatttttaagcttatatat atatatattatattttcaaGCTTACAACTGATCGATATTGCaagaatttt aaatttctaGCAGTGCTTTTAACCCGTTGAATGTTGAATTTCTTTTAACT TTAGTTGTGAGAAGAAATGTGTTCAGGGTTATTACGGAGAAAGATGCAGA TCAAAATGTGGATGTATTTCAAAGAATACCTTAGATTGCAATCATGAAAG CGGAAGTTGTTCTTGTAAGATTGGATGGATTGGCTCCAATTGCAGTATTC CGTGTAAGTACTGTTCAACTCCAAAACATGACGCAAAAGAACATTTACTT TATTCTTGTTATAATGGTGATATTaaggtaccttaagggaagaaattttc gcgagaagaaattttcgcagaatttaatttcgcgaatcagagtttaaAAA TGGCAGTGCGTAGTGCGTTAGTGTATGAAGGTAGACTGGAAAGCAAATAG CTCCAGTCGATGGCTGATTTGGGCTTCTTGAGCAAAAACTTTGGCAGGTA AAAGTGTCCAAAAACTTCCAAACTTCTCGATGGCGAGAAAAGTCCGAGAC AAGTTACCAAATATTTTATTAGAAAGATATTGCCTGTACCAGACGAGCAC GGCTTTCTCGACGTCGTGACAGTGATAAGATATCGGGGATAGGGATAGGC AATAAAAGATATGACAACTAACAAGAATTTATgtatttcttttcctctag attgtGAAGGTTGGACACATGGCGTGAATTGCAATTCGACTTGCCAATGC GTCAGGAAGAACACTAAAAGGTGAAAAAGCAATACTCCTGGGCCCAGTTG TTCAAAAAGCGATTAAGACCGGATTACATTACGATTAGCGGTGATTAAGC AGTTGTTCGAAACTCACGAACTTAGTCGCGATTAAGAAACGATTAAATCC CGATTAAGAAAAGATTAAATCCCGATTAAGAAAAGATTAAATCCCGATCA AGAGCCTTAGCGGCTCCAACCAAGCCTTAATCCTGCTCCATAGCGGCAAG TCGTAGGATTAACAAATCGGAAAATCGCGATTAGCGGTAATCGGCTCTTA ATCTAATCAACTTATGAACAACTGGACCCTGTTACCAAGAACACGAACTT AAACTACGATATATATAAGCCGGTGAGAAATCTCAGAATTAAAATAAGCT CTGAGGTGAAAATATCTTAAATATAAGGCAATGATATGATGATGAAAACT AAACTTCCATAACACACTACAAAATCCAACCTTAAGACataactattttt ctttttttccagttGTGATCCTTTAACGGGTGAATGCAGTTGCAATGAGA ATTGGGAATCCACAGACTGTAGCATCGCAATCATACGtaagaaaattttg tttctttcgATCAGGTATAAGATAGTGAAAAGAGATGAATGCTCATACAC CAATTATATACAAGAAGGACTGAAAATAAATCAAGGAATTTATCTTTGCT CAAGAAGGCAGTAATAGAGCACTAGACGAAAGTACAATCTAAATCAGAAT AACAACTGACTTAAACCAGATAAAGCATTTTCCAGATCATATCTGATCAT ATCCAAAACGTCCGGGGAattaaatgaataaaataaatcCACTTATTCTT TCCAGGCACATCGAAAGCGATTCAAACACTGAAAGACCCCTTGGTTTTTG GTCCAGCTATTGCAGTTGTGGTTTTGATAGCATTTATCATTGTTTTACTG TCTTGCAAGCGCAAAAAAGGTAAGCcagaattgaaattttcaagctaaat acTATTCAGAGAAGAGGATACCATTGATAGGCAAATAATAACATCCATGC ATAAAGGGCTGAAATAAATACTCCGGGGAAGTTTTCCTAAACAGGCCATA AAGCAATTGAAAACAGCTTCTAGACCAGAAGAGCTAATAAAAATTAGATC TACCCAtctcaaattcaattttcttttttcaggttcaagaaagaagaaag aaatcaaaatgacGTAAAATGACTTTCCTTTTCTCCTTGTGCtccatttt tttcgaaatggtTTGACAGATTAAACAACAGATCCTTCTGAGAAAGGACA TTTTCGGTTCTTCCAAATTAGTTTTCTTAGCGCAATGTTGCCAGATTTAA GGTAGCCTTCATCCTAATGGAGAGAAccattcttttataaaaaaggaCCT TTCAGTTTGAATTGACATAATCCCCAGCATTTGTTgttataattttgata aaaagaattttcttgCATTAGATTCAAAGTTATTCCCGAAGATTCGTCAA TATTATACGTAAGTGTATTAAACATACCTTTACCCAACCAATAatcagtc tgtgccactaactcgattgggaagattcttccgaaatgggaagaacttac tctaattttttctgcccgtttgggaagattcttcctttttgggaagttga aaattgactgaatctcggcgaagctgtacgatgaccggagaaagttgaaa ctttttggaggtgaagaagcatcaaattttaaggtttttcacagaaagaa aagtagactttaccgtagaaatcttgttaaattgtgaaaaaattgCGTGA ACTTCCCCAACCCGATCGAGTTTTCCTTAATTTCTCGCTTCTTCCCGATC TGGAAGTTCGTTAACCCGTTTGGGTGTTaagttaatttcccgttcgggag gattcttcccatttcggaagaatcttcccgatcgagttagtggcacagac tgatAATCTTTTCACAAACAATTCTTTTGAAGCATTTCTCATTTGTTTAA TCTGAGGAAAATGAAGGAAAAATGTTTAGATTTAAATTTAtgttaaaaat tctaaatatgtgCCCTCCCCCTCAAGTAACTTGGCGTATAATTCCTAAAA Cctgaaaattccaaaattaagggaagaaattttcaaggaatttaatttca cggtattttgaaaaatctgcgaaattaaattccgcgaaacttaAATATTC CCAGAATTAAAAGTCACCTCccttttagggcaaaataggccattttctaa acaaaaacttttctcaaccgcgaaattaaattcggCGAAACTTCCAAACT TTGAGCTGTGagccgcaaaaatttcttcccttaaggtaccttTATTGTCG ATGACGTTAAAGGTTCATGCATGCAAAGCCCAAAAAGATAGGTAGAGATG TGCCCGTTAAAAAGATACGCGTATCAAAAATATAAGACTACCTTTGGGAC ATCATTTCATCCTCACATATTTCTTTGATTCGACCATCACTACAGAGCAA CCATGTTGATGACGACAGCGACTATATTCAAAATCACGTAACGTCATTCA CCAAACGAGCGACCAATACTGAGGATAATTATGTTGAATTCAAGACCAAC GTGGGTGCAGAAACATCTACTTTCACACCAACGGAACATTTGTATGGGAA TACACAAGACGTAACATCATTTTATGATAACCTAGACAGCAAAACAGATG ATTATTCAAGATATTCAAACCCGAGACCAGTAGAGAATGAAAACCTTTAT TATATGGCTACATCTAATTCCCAAGAGAAACTAGTGAAAGAAAGGGACAG CCACTATGATGGATATTCTGTACCCAGAACAATTGAAAATGATTACGCAG ATTTCCCTCCCAAGCCTTTAGAGGAAAATCATTACATGGGCTATACACAA AATGTTGATACAAACGAGGAGAGTCAGTATATGGCTTTGAATAAGAATAC ATTGGAGGAGAATCCTTATGAGGTGACTCAAACTAGATTTTCCGATCAGT ACAATAATAATAAACAATATGGACAACAAGAGAACCTTTACGGAAATGTA ATGGCTGGTGAGGCTTTGTATGGAAATATTTGAAGCACAAACATAATTAA ATGCGCTAAAAATTATTCCACTCATCAAATCTGTACGCGGGAATCaacac aaaaaaaatcgaaagaatGTTAAATTTTGTGATCACTCGCTTACCTtctt tgaattcattttttatcaAGATCCAGGAGCAATTTGGTAGTGTGGTATAT TTTTAATTATCACTTTTtactaaaataagaaaaaggacAAGAAGCAAAGC AAACGACAAAGGCTTAAGTAGATTAACATGACATCATTTTAAAGGCATGA AAGGATTGACTAAAATATtagagaaaaagaaattcagaATTGAATTTAGA TGAGAACAAAGTTAACGATTGTGCTCCAAAGTAGGTTAATGGATTGTagt taatttatttatttaaaaagataCTCTATATATTGTATTGACAATTTCAA TAGATTTTATTGTAATTTCTGTAAAAAGTTCATATCatacaattaaaaaa tttattattaaaacaataaatagctttgaaaaatttataaaaataagaaa attagaaataaattatcatcatcattatctatctaattttggttaaacaa aaaagtttctttattGAAATTAAACATCCTAATACATCTTTTCGGCCGTA Gtcacgcggtcaggcgcgtgccactttattatttaattatccccctaaac ttgATCGAATTCTTTTtatacacttttttcttttgtctctAGGTGCGAAa gaaagactgggacggttttagggtggtaacggacaaaaaaatgcccgcgc ggcaattggcggatGTGGTCGAAAGGTGTATTGATGGTAATTTATGTATC CGTTTTGTGATATTATTTATAACATTCAAATGTTCATCAGTTACTCAACA ATAAATAACACTGTTCATCTTCGTCGATTGCCTTTTGACATGGGTTTGGT TGGATAgtttctaaaaacaaaagaaaactattTAAATCTTCCAATTCttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055922TCONS_00055922Clytia hemisphaericatranscript
TCONS_00055923TCONS_00055923Clytia hemisphaericatranscript
TCONS_00055924TCONS_00055924Clytia hemisphaericatranscript
TCONS_00055925TCONS_00055925Clytia hemisphaericatranscript
TCONS_00055926TCONS_00055926Clytia hemisphaericatranscript
TCONS_00055927TCONS_00055927Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055927-proteinTCONS_00055927-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:182945..194194 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.03 0 0 0.06 0.08 0.3 0.34 0.48 1.7 1.76 0.73 2.72 2.22 3.99 1.96 1.45 1.5 3.6 5.45 0.77 0.91 0.31 0.83 1 1.95 0.19 0.11 1.35 1.45