XLOC_035217 (gene) - C. hemisphaerica

Overview
NameXLOC_035217
Unique NameXLOC_035217
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:287261..291743+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035217 ID=XLOC_035217|Name=XLOC_035217|organism=Clytia hemisphaerica|type=gene|length=4483bp|location=Sequence derived from alignment at scaffold_266:287261..291743+ (Clytia hemisphaerica)
GAGACCGACGATGGTGAAAACAACACGAAGAGCGACTTCAACAACACGAA CACCAATTCAAGGGTACAAGTACCCGCCAAAGAAAACAACTCGGTAAGAT CTCTAAGGTTTCTAGCCCACACAAACCCCCTAAATAAACCTATTTTATCA AGTCGGAATTTGAATTCAGCATCGTCTATATGAAAATATAGAGCAATATA ATTTTACCAATACGAAAATAGTGTTCTTGGAAAAAATAATTACACAGGGC AATGAGCTACCCAATCAGAAGTTCAGTTCAACAACCTATTATATAATGAT CCATAATTTAGTTGTATCATAGAAAAAGTTCGTAAAAGCATCTGTCAAAT ATGCTCGTAGCATCAAAAGATTTCAGACAGTAAATTTATAAAAGCTCTGG TCGCTTTGAAAATAAACCTTAAATTTAATACGAATTGTTCCTTACCTTGC TTGGTGTTAATTTGGTCCGAATCCAATATCGTCACGTATAAGTCTGAACA AAATATAAGAATAAAAGCTAGTTTCATTATTCTTTTCATTTCGCAGACAA ATCTCCAAGGTTgatttcatgtgaaaattcttgAGGTTTGAAAATCTCCA AGTTAAAGGAGAACGAACCAATATCcagtttaaaatttaaattatttttt cgaaagattattttgaaaatcctttcTCCTGTTTGACATGTACGTGAGTA AGTCGAACATTCTTGGAGAGACCAGAACAGAAGATTTTGGATTGATACAC AACAAGATGGGTTTCCCTTTTTATTTCTTGGTACAGAATGTTTATGATTA TCGATGCAATAATAGTCTATTTCATGGTCGAAATAAATCTGGGGTAAACA GAACTGCCACAACCTTCTTTGGCTGTCCTCCGACAAAGGTTCTTGGCGTT TAACCAATCGGAAGCGGTTAAGGGAGCCTTCGTTATTCCCTCACTTTGCC TTGGTTTCATTTGCCtgggatttcatttttttcatctatcATAACTGCAC GACAATACATCCCCTTCCATTGTTCTAAACTGCAAGTGCTAGATTTTTCT CACATTTCTACAGTAGACTTGTAtttctctttcttttattttctagaCTG CGAGCGTAGCATTCCAACAAAAGGCGAAGATTGAAGACCAGATGAACAAT GAGAATTTGGAGCAATTGCAAAAGATCTTCGAAGACGCTGATGAGGATGG AGGAGGTGGGTTGGATATAGAAGAATTCGGACAAGCTATGAAAATGGCGT TTGGAAGTTCGGATGAGTTAGATGACGAACAACTACAATTGATGTTCATG AAAGTTGACACAAATTGTGACGGTACGGTGGATTGGGAAGAATTTTGTTC CTATATGTTGTTAGAGAATCAACAAAAAGATAGTATGACCAGAGATGTTA TCGATCTTCCCTTCCCAAATGCTGCAAGAGAAATAGCTAACCCGCATCAT GACTCTCTCGCTAAAATCACGTATTTCCCAAGTCTTGGAGTCGCGCAACG TGCGTCCAACGCCGTTGACAGTGAAGAACTGGATAACGGGAACGGGCGTT ACATCTCGTGCAGTAAAGACGGTTTGTTCGTTTTCTGGAACCTGGACCTT CAGATTCAACGTACAATCAACTTGAATGACATGCAGACCAACGGTAGCAA ATCCAAACAAATCTGGGTTACCGACGTCGTTGCATTAGCGAACGTAAAAA AAGTTGCCGTGGCTACAACAGAACGCGATATTACATTTTATGATTGTTCT GCTAACAGTTTTGAGAAGCAATTTCTGTTGACAGGACTTCCACATTGTGT CTTATGCATGGATTACTGGTTCAACCCACAGAATATGAACGAAGGAGTTC TAGTGACCGGTGACGCAGGAGGAAGCGTATCGTGCATGCAATTTACTCAA GCAACGGTCGGTTTATTTGATGTCAGTATTGGTAAACAGCACAATATGTC CACATCCACTGTTCGCCGTATTCCGTTCCAAGAGTTATGTGTAGGAAGAC ACTCCAGTGTCAACACCATTCTCTTCAGTGACTTACACGATGATTGGGTA CGAAAAGTCAAGTACATTCCCAACCTACAATGTTTCATTTCGTGTTCTAA CACCGGTACGTCTTCATTATTCCTTGGTGatctacaaaataaaaagatcA AGTCATCCTTCAAGATTCCCAAAGGTGTTTATTCCTTTGATTATGACAAA GAAAATAACATCATTGTCACCGGAGGTCTGGATCGGTACATCCGACTCTG GAATCCATACGTCACTATCAAATCAACTTCAGTGTTGAAAGGACATAATT CTTCAGTTATTCATATTGTCGCTTGTGCTGACCAAATCATCAGCTTTTCT AAGgataaaatgattaaaatatGGGACACCAGAGATCATTGTTGTATACA AACCATACCAAGTAGGTTGACCGACTTTGGTGCACATCAGATCACCACTG TTTATTATAATCGCAAGTTACAAACATTGTTATTGGGGAGCTGCTCAATA GCGGTGCTTGAGAAACGAAAGCCAGAGGAAGTGAATGTCTCATTGATCAC AGAGGAAGAACAACTTAGCCATCCAAAACCGCTTTGTGGTGCTCTGTATA ATGACTTATTTAACCAAGTAGTGAGCGCGTGTCACGGATCTATCGTGAAT GTGTGGCATGTGGACACAGGAGAAAAAGCTATCATGTTCACCAATGCGCA TAATGGTCACGAAATCACATCCATGACTTTCGATCCAACCAAACGTCGCT TAATTACCGGCTCACGAAATGGTTCCGTCAAGATTTGGAATTTCAACAAT GGCGCGTGTTTACATTCCATGAACGCTTTAGATGATAGTGAAGTGACAGG TATCGTCTGCTTGAAACAACGCATCGTAACTGTCGGCTGGAATCATAAGA TTATGGTGTATCGTGACGTTAGAGGGGCGGAAGACGATCCGCCCAAAATG TGGAATAACCTTCACAAAGATGATATTCTATCCGTTGATCATACCAAAGC TGGCCTTATGGTAACCACCAGCTATGACGGACAAGTCTGTTGCTGGAACA TCGAGACGGCGCACGTCTTTTGTCAGATGAACGTCAATGACAAAAGGACC AGGTCCAATCAAGGCGGAAAGATTGCTTGGAATAACCGTATTTTACCACG AAGAGCCACCATCGATCTAAAGCCTGATGATATCAATAAACATTTATCAG TCGATAAAGTGATCTTCCTTCAGAACAGAGAACAGGACAAGAAAACAGCC ACTTTGTTGGTCAGTGTTGACGGAATCATTCAAGCATGGAGTGTTCAAGG TGGTCTTCTGGGAAGATTTGATGCTACGGGCCGTCGTAATGATGAATCTA TCTTAGCGTTGAAAAGTGATAGCCTCAATCATATCCTGTTTACAGGTGAT AGTTCAGGCTACATCAAGATATGGGATATCAGTGATTATTGCattaaaca acaacaaacaccTGTACAAACTAGAAGTCCTTCACCCTTAGACCAGTTCT CTAGAAAAAAAGCTGGTAATTCGTTAGCAGGTCTTCTGAAACGATCAACC GTGGATAGCTTTAATCGTATGACTTCTTCAAACACTAAATCTTCTAGCTC AAAATCTTCGAGTGACATCTTTGATTCGATTTGTAGCCCTCCTGAAACTT TACTTCAATTCAGGGGGCACGGTAAAAGCATTGTTTCTATTGACTACTGT GAGAAAAAACAACTCATTGTCACTGCATCAACCGATTGCTATGTCCGATT ATGGACAATCAATGGTAAATACCTTGGTACATTCGGACAAAAACAACCCT GGGACTCACTCGAGAATTCAGTCAACTTGAAAAAAGCACGGCGCCTACCT CCTGATCTTCAACGTATTGCATCCACTCAAACATTAAAGGTGGTGAACGG GTCCGCACCACGCTGGAAACTAGCGAGaaatattttcactattttacaCA TGGGCAGACGGAACACAAAGTCCGCCGTCAAGGACGAGGACGTCACACAA ATTATTACGAGCGAGACATCCGCTATCAATAGACACCAAATACTAGATAT CCCTATTCATGAAGTGCTGGGCAAAAATTACAAACCGAAACAACGACACC GTATGCCACCCATCATTAAACCAAAAATCAACAATTTGCAATGCGTCGCT TTCTCTTCCTTACCGTTCAAAGAACTAGAACACATTGAAGAGCCCAAAAT GCCGCAAGTTTTGGTGCACGCCATGGCTGCTAggcaacagcaacaacaac aacaaaacaatagaACGGTCGCATCTGCCATTAACGGTGATCAAAATCGA AAAAGTCAGTATTCGAATAACCGCAAAGGAGGGACGTCGCCCATTAGACA TACTGTCAATAATCGTTTGCTACCGGCTATCGCAATGAATAGGAACAAAC CCAATTGATTTtatcaacaaaaatattctacttgtaattttcttttcaat tattATAATAAACATATTTTAATCCTATACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055932TCONS_00055932Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055932-proteinTCONS_00055932-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:287261..291743 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EFCAB8PREDICTED: EF-hand calcium-binding domain-containing protein 8 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.06 0.06 0.04 0.06 0.03 0.06 0.03 0.02 0.01 0.04 0 0.01 0.07 0 0.01 0.02 0.04 0 0.01 0.02 0 0.01 0.07 0.31 0.44 0 0.02 0.02 0.01