XLOC_035229 (gene) - C. hemisphaerica

Overview
NameXLOC_035229
Unique NameXLOC_035229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:676835..682163+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035229 ID=XLOC_035229|Name=XLOC_035229|organism=Clytia hemisphaerica|type=gene|length=5329bp|location=Sequence derived from alignment at scaffold_266:676835..682163+ (Clytia hemisphaerica)
GTATCTGATCCTTATTGCCATTCCATTAGCAATGATCATTTATGGTAAGT TTACTTCATTTTGTTTTTCGCTTGTCCAATCATAGTCCAGGAGCCAAACc tgaaaatgacattttgcCCCGCATTTTGCTTagcccaagattctacagga taaacttttttggaatcctcaactatcctagtttaagaaattcctgttca atttttcatactgggtcTGAGtttttagggggtactttttaccctttgta acgatttgttaagaaaaaatctttccatgtatgatataatttgctttata ataaaaataaatcgaCCAATTGCCTTGAAActttgccaaaagtttcaaga tagattggtgatcatcattgacaaaaattttttgcgaaAAACTATTTTTG GGGGTTTATCTGGGGGAAAATAGAATGAGGCACAAACTTTGTGTTATGAT AAATCTTAAATGCGATACACCcgaaaaatttcttgtcaactgtatttagt aTCATTTCGAcgcttcagggggtaaaaatgcccattttattgaattatta ttattattattttgttgaAAGAATTGGATATTATTTGACTTTTCGAGGAA GACGCGCATGACGAAGTCGATGAAGAGGTTGAACAGAAATGGACTTTCAG GACCACCCTGACGTACGCCTGATGTAGTCGGAAATGTCTCTTTTTCAAAT GTTAGACTTGTGTCTGAGTACAACTTTTCAAGGATGTTGAGGATTTGGGG ACAACGATTATCAGAGAAACGTAGTTTGATAGAGTCAAATAACCATTTTC TGGGGATGTGGTCAAAAGCCGCGGTGAGATCCACAAAGAGGAGAAAAAGA GGTTGCTTCTTGCGGTGAGTGATCTGTTGAACTCGTTTTATGGTATAGAT ACCATCGGTGGTACCCCTATCTTGGCGAAAACCATTTTGCTCCTCTGAAA GCTGGGCTTCGTACCAAGGACGAAGGCGACCCAGAATGAGATTGATGACC AACTTACAAACAGTTGATCCGATGCTAAGTCCACGGTACTTTGTAGGGTC GTTTTTGGATCCTTTACCTTTCCAAAGAGTACGGAGTCGAGAGTTACCCC AAGCGTGGGGTACGTCCAGGTTTTGCCAAAGGTTTGAGGTCATGCGATGC AATACTTCTAACATAATTGGGTGGTTCAGCTTTTTGAGAAACTCAGCATC AATGTCATTAGATGCTTTATTGGATTTAAGCTTTTTAAGATAAAGTTCGA TCTCGTTCAGGGTTGGTGGTGATCGTTTATGAGGACAGTCTGCGATATGC GTTTTTCGACAAATTCTGGGATATTCGAATCAAGTTCTTCAGGGGTCCTT GTCGAGGAAGGATCAGGAGGGTTGAAGTGTGATTTAAAATGCTTCATAAG TTTATCTGTTGGGCATGAGCTAGGTATATGTTTCAGAGTCGTCACTTGCT GTTTAGCTCgttgaaacaatctttgaagtTCTCTATTAATGGCAAGTTGG TTAATTTTGTCAGCCTCAGCTTTAAAGTGTTCATTTTTCAGGAAACGTGC CCTGAAGCGaatcttttttctgattttggcaATGTCCTTAAATTCAGCAT TTCTAGTAATAAGTGAAGTTTTCTGTTCATAGAGCTCAGCCAATTTTTTA TCATTGTGCCAGGGCTGAGTAGTAAACGGGTTGTTTGTTTTGGGGACAGT GCGGTCGGCTGCTACGGTTATCGAGCGAATTAAGTGTTGATTGAGCAACT CGTTATTATCGTTGTCTACTGGTAATGAATCCAAATTTGTTATAGCAGAG TTCATGAAGTGATTTTGGATATCTTGGTCATTACGAAATCGATTCatatc aaactttaaattaGATTTGTTCATTGGTTGTCTCTTTTTAAAGCGAGCTT TCTTGGTACACGGCGTGCAGAGCGTTGCAATGACAAGGCGATGATCGCTA TCAAAATCGAAACTACGGTACACTCGGCAGTTTTGGGAATATTGACGTAG CCAACTATTAACGAGAATAAAATCGTAAACTTTTTGGGTGACACCATCAG GGGAATACCAAGTAACGCGCCGACAACGTTTGTGATTGTACCAAGTATTG AGAACGGAAAGACGACACGTGTTAAGAATTGGTGGAAACGTTCACCATTG TTGTTTACTTCAAGGTCGGGGACAATCACATTTTCGCGAAGCGATGAGTT TTGCCAGACAGCAGAGGAAGTTGCGTTAAAGTCTCCAAGGCAAATGATAT TTTGATTATGGTTTGCTGCATTTATCTGTTTTCTCAAAGAATTATAAAAA CTTGTCTTACTGGCTATCCACTTCAGTCGGAGCATAGCTATTGATAACTT TAAGGGAGTATCCGTAGAGAACAACATCAAGAACAATGATCCTGGCGTTA ACGTGGGTGATATCGGTTATTTCAATATTTGGGTCAACTTTAACAACGAC AGCGACACCGTGTGTCCGTTTGAGCGCATGGCCACTCCAATAAACTTCAT ATTTCGTATTTCTGTTTTCAATAGTAATAGGTATGATAGCTGAGTCTTTT CCATGTCTTCGTGACTCTTGGATCGCGCAAATACTGAGCCTGATCAACCG TTGATTTAGGGGCGTGTCCGGTCAGCACCTCGTCCCGAGACAGATCAAAA AGTCAATCCATCACCattgtttgttttgttctttttattGAACTCCTAGA AGAATTATCCTAGTTGAATTTTAGGCGAGGCTTTGACATAGAGTCTCCCG GAATAATAAGTCTGCCGATAACCACCCTGATGTAGTTGACAAATACCTTC AGGATGAACTGGAGAAGGACAGAATTATAGGGCCCTTTGATGCACCCCTT TTGGGGGTACCTTTCGgcttggaaaaattttcccaaaaacttTGAGAGTT AGCCAGTATCATTACCTgcaaaaaaactcaaactatCTACTTTGTCTATC CTTGGCTCCTGTTTCTGACTCTATCTAAATTCCATAAGGTAGAAGTACAA GTTAAAATTAACTTAACTTTTAGGCTTGGAAGTGATTCCGTGCTTGATGA CATACAAATGTCCGTATTGGTTGTGTCTAACGGATATGGGCATTTCACTT TAATTTACATTGATTTTTgttgtaatgtttttaatcaaaagaaaaacttc ttggaagtgtgtttcagttaaattacaatcaTTAAAGTCATTATTATATC GGTAACTTCATGTCGTATTatcaagccaatcaaaatagATTACAACTTNA Ttgactaggatagttgaggattccaaaaatatatagtttatcctgtagaa tcttgggttaagcaaaagtgctttTTTAAGGAGATTTGGCTCCTGGACTA TGAAGGCTGCTTGCCATTTAAATCCAAGATAATAGACGAAATTGATTTTG TCGCTTTGAAAACGTACTAAACTTCAAATAACAGATAGAAAAAGTGTCTA CTTTGAATACTTCCCCCCCCCGGGAGGGGGGGGAGGCACtaatatgatct ggcctacgtcatgtgccgcgcttaagggtgggatTTTtcagtgcactgta agggtgtgtttctgtgagattgcactgcaagggtcgaattttaaaacaaa ttcaaaataattgataaaaagaaaggtttatacttctcgtttgtttgaaa cagaaaatttcccaagcttctttttttcacgcagatttacagctgaaaaa tatagtgcactataagggttgggtaaatcatgagaaaatgcactgaaagg gtaccttttcagccatattgaattgcactgtaaaggtacgatttcggggt tgtggatggtgaGATTTGTtcgtatttttgaaatttgtcgttTGTTTTTT ATGTTGCGAAGTAGGCACTTTCTCCCCGTCATAAATACATTTCTCTATGC AATgaagaaagtaaaaaaagtcTTGCTAGGACCATCTGCGAAACCTTACA TATCTTTTCATACACAAACTCAAATACTGGATCAGAGATGCTTAGATCGA GAGATATGGCTAAAAAATGCATAAAGGATGTTTATAAtaagcaaaatatt ttgggaaatacgtcaaaaagcaaaaaacaGCNATTATATCatacatggaa agatattttccttaacaaatccttacataCAAatggtaaaaagtaccccc taagtTTGAGCCCAGTATGAAAAGTATGGGGTTGTGGATGGTGAGATTTG TtcgtatttttgaaatttgtcgttTGTTTTTTATGTTGCGAAGTAGGCAC TTTCTCCCCGTCATAAATACATTTCTCTATGCAATgaagaaagtaaaaaa agtcTTGCTAGGACCATCTGCGAAACCTTACATATCTTTCATACACAAAC CCAAATACTGGATCAGAGATGCTTACTTAGATCGAGAGATATGGCTAAAA AATGCATAAAGGATGTTTATAAtaagcaaaatattttgggaaatacgtca aaaagcaaaaaacagccaaaatcgAAAAGTGGAGGACCCGAGGGGGGGGG CTACTACCTTTGCCATCGGACGGGGGTGCTCTGCTGAGGTTCAAAAAATG GGCCCTACGAGGAACtcgttttttaaaaagttttatcgaaatttgcgaaa aaagtgaccctgaatgggaatgaaattccaaaatgttctaaattttttaa tgaaaaagtacgtaccagaggggggtatagccatttgcgtacatgggggg ggagggggtactcgattttcgacattttagtgcgtacgtactatgtggac ggccccttggGACTCGTGGTTGAAAAAGGTACCCCTcctttttttcaggt tttgttGGTTTGGGACATTGCAGTGTTCAACCATTTATCCCGAAATTTAT GATAACCAGTGGCTTCATATCagccatatttttctttttatttcttgtgG CATGGGCAACTGGTTCCAAAGATGGGTCTTCATGTGAGTATGCTGCAGTA TTTGGCTTCGTAGTTCTTTTGGGAATCCAAATAGCAGGAGCTCTTTATAT ATTTGATATTGATTCTTCGAAAGTTATTGATGGAGTAAATTGCGACAAAG ATTTGTACTGGTTCGCTTTTGCATTACTTATAATATTTTTGGCATCATTT TTTGTGCTCGGCGTTATTTTTATTGCGTACATCAATAAAAACTAACACGA GTCAAATGcaaacataaaattctcaagtCGATCGCCAATTTCATTCTTGT ACAGTCGATTCAACACTTTGCTCTTGAAAAAGTAATCAAGCTTGTAAATG AATGTTTTATATATTGTTCTTTATTTGGAATTAAAAGATAAACCCCTCAA AATAATCTCCAGGGTATTACGTatttctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055964TCONS_00055964Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055964-proteinTCONS_00055964-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:676835..682163 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.19 0.22 0 0 0 0 0 0 0 0 0 3.16 2.01 0.06 0.06 0.36 0.3 4.33 3.67 0.19 0.27 0 0.3 0.1 0.19 0.53 1.28 0.54 0