XLOC_035466 (gene) - C. hemisphaerica

Overview
NameXLOC_035466
Unique NameXLOC_035466
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_272:1..2380+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035466 ID=XLOC_035466|Name=XLOC_035466|organism=Clytia hemisphaerica|type=gene|length=2380bp|location=Sequence derived from alignment at scaffold_272:1..2380+ (Clytia hemisphaerica)
CATCTTACACTAAGCAATTGGAGTCCTTTGATATATCACCATTGACTGAA
GCAGTTGATGGAGAAGATCCTGAGTCAGCTGAAATTGAGCAGCCAAATGA
TGTCATTGAAAAACAGGTATAGTATTATTTCATCGCCAATATCGTTTTAC
AAAGTTTTCACAAGGCTTATTTGATCTGAGCTTTTTACCGCCGAATCTCT
ACTCTATTTCGATAAGGGACCACAATATTGATAGAATTCTCAGATTCCCT
TAGGAATAATGGAGGTTCAAAATAATGGAATAGAAGCATTATTTTTGGGG
CCTTTTGGAAGAAAATGATTTACATTGGTTACATTGGTAAAACAATTTCG
AATCCTTTTAATCCTTCGTTCCCCATTTTTTAAAAGGGAATGTACACTAT
TTGTAAAGAGAGGTCATAGAGCGTACACTTTCTTTAtgataaaatgtttt
ttccacAGTTTCTTTTTTATCCCGAAATTACAAGTCATTAACAGTCAAAA
CGTAAGGTAGAATTATCCCACCTTAAAATTACACAGATTATGGTTATTAT
TataatcaaagaaaataatatgTAGCTACTTTAAGCTGTCTCCGAAAATA
TAACCTGATCGGATTATTtggataccttatcggggaaaaaaatgtcgaag
ttttatttagtcgttttttttttcgtcggggaaaaatttcgtcacctaga
ggcattttcgtcattttcccccgaccaaaagtTCAAACTCGTCACTTTTC
CCCCTACGAAATTTACAAttcagtcactttcacccaactaaattgtccaa
atgaaatggtttccttcactagcttgaaaaaaatcttgtaattcgacgtt
taaagcactaatttcggttaataaaggtgtaaaaatttaggttttaattt
tggtcggggtttaaaaaatcgcggtaaaagttttggtcgggggtaaaaaa
attgggtaaagGTTTTGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAATGATGTCAT
TGAAAAACAGGTATAGTATTATTTCATCGCCAATATCGTTTTACAAAGTT
TTCACAAGGCTTATTTGATCTGAGCTTTTTACCGCCGAATCTCTACTCTA
TTTCGATAAGGGACCACAATATTGATAGAATTCTCAGATTCCCTTAGGAA
TAATGGAGGTTCAAAATAATGGAATAGAAGCATTATTTTTGGGGCCTTTT
GGAAGAAAATGATTTACATTGGTTACATTGGTAAAACAATTTCGAATCCT
TTTAATCCTTCGTTCCCCATTTTTTAAAAGGGAATGTACACTATTTGTAA
AGAGAGGTCATAGAGCGTACACTTTCTTTAtgataaaatgttttttccac
AGTTTCTTTTTTATCCCGAAATTACAAGTCATTAACAGTCAAAACGTAAG
GTAGAATTATCCCACCTTAAAATTACACAGATTATGGTTATTATTataat
caaagaaaataatatgTAGCTACTTTAAGCTGTCTCCGAAAATATAACCT
GATCGGATTATTtggataccttatcggggaaaaaaatgtcgaagttttat
ttagtcgttttttttttcgtcggggaaaaatttcgtcacctagaggcatt
ttcgtcattttcccccgaccaaaagtTCAAACTCGTCACTTTTCCCCCTA
CGAAATTTACAAttcagtcactttcacccaactaaattgtccaaatgaaa
tggtttccttcactagcttgaaaaaaatcttgtaattcgacgtttaaagc
actaatttcggttaataaaggtgtaaaaatttaggttttaattttggtcg
gggtttaaaaaatcgcggtaaaagttttggtcggggataaaaaaattggg
taaagGTTTTGGTcaggtgataaaatatcggggaaaaaattcgtcggggg
gaaatttcgtcaccccctcaaaattttcgttactttcccccgacattttt
ttcccgataaggttaatttaaaagaaaaaaaataaatctcgTTCTTCGAA
TGGAAAACCTTGTAAGTTTTGAACTCTCTTGTATTATTTTTCAGAATGAG
TCGATTAATTCTGACCACGATACTACTGTCGATAATGAGAGTTCCGAGGA
AAATAGGACTTGCTCTGATAGTTGCGATGAGGAAAATGAAACTCACGAAT
CATCAGATACAATAACAAAAGGATTGCTATGTGGCCAAGAAAAGAGTGAT
GAAAATCATGAGCAACCCACCAGTCTTTATGAAGTCAATCATGGTGACGA
TGAGAAAGAATTCGGTGGAGAAGGTAgttatgaatttctttataacaccc
ctgtgtcacagacccgctgggaccttAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056298TCONS_00056298Clytia hemisphaericatranscript
TCONS_00056299TCONS_00056299Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056298-proteinTCONS_00056298-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:1..2380 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.46	7.46	4.72	2.85	20.08	11.36	13.71	12.83	14.06	12.86	13.74	12.98	8.8	11.05	10.46	12.88	11.22	12.45	12.31	9.2	10.13	8.85	17.94	15.95	11.05	15.32	7.63	5.65	8.98	11.23