XLOC_035535 (gene) - C. hemisphaerica

Overview
NameXLOC_035535
Unique NameXLOC_035535
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_275:45284..53687+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035535 ID=XLOC_035535|Name=XLOC_035535|organism=Clytia hemisphaerica|type=gene|length=8404bp|location=Sequence derived from alignment at scaffold_275:45284..53687+ (Clytia hemisphaerica)
CTGGTATAATTTTAGCGAAATAGTAGTAAAAAAGATTCATCACacacaaa aaaacaatgaattcAATCAAATCAAAGTTCAAATCACCAGCAagcaaaaa acaaaagaattttcctGGTTTCATCGTATTAGAAAATGAATTTATTAAAT CACCACCTGAGGAAAAATGGAAGAACGCCAGTTGGAATAAACGATATTTT ATACTCTTAAAAATGCTGAATTTGAATGAAGACAGAGATGCCGGTTTGAT TCAGCAAGGATACAAAAAAAGTATCAATAATGATGGCAAGAATTCTTCCT TCTGCCTACTTTATTGGCACGATGAGGCCGAACGACGTAAAGGAGCCAAA CCTATCCGTAAGTATTCTCTTTATGAGTGATCAATCACGACTGGAAATTG ATATGTATGCAATTGAATCTTTGTAACTCCAACACGCACAGGGAATTCAA ATTTAGTCAAGGAAATTTCGATTCATAGAAAAAGGTTTCATTCGAGCTAA AGagcttcgaattatagagactgTCCACTGTCATTCCAATCTCTGGCAAG CAAGACTTTCAAACCCTTTCTGGTaaacccggggggtactagggttgcga gctgacgggggggggtgccgcccgactttcgaccctcggacccttaccgg gactaaaaaggagaaaacaaagaaaaattttgggtattttacgaccctta gcgggacaaatttgaccaattttgaccgaatttcgatctttcagggggta aaaagttgaaattttcctattttttcgaCCCTTTGcgagactttggaagt ccaaaacaggtacccttaagggcggcacataccataccctccatttgcct aagtaccccccccccgggctggTAAAGTTCACTGTTACCGAGGAAGAATT GagatttttaattgaaatttgcCAGCATGTTTCGTATCTGAAATAGTCTT TGCTGCTTCCTAAACCTATTTGCGATATGTGTTTTCAGCCCGTTTTCAGG GACGAGTCCCTCATTAAGGTTGCAAAGATAAATTTTGCAAGATAAAAGAA GGGAAAGGTCCCAATTCGTGAATTCGTAGAATAATATCGATATTGCATCA TAACATATAGTATGACCCTTATGTTTGTTTTTGCTGATAGTTGACAAACA CTTATCTTTTATATCGGATTATTAAAGTTAATGCGATTCGCACTCTCTCA TAAGATCTTTCCCCTTTAAACCTTGTTAACGTAATAAGGAACTGAGGAGC GTAGTGATTATATAATAACTAGAACTCTGTCTGAGAATTGAGGTAGGGAA CATccattcaatattttcatttttttaaacagaATTTCAGGCATATTTTA ATACCCCAAATAGTCAAGATCATCATCagttcatgatatgcaccactgca aacCTGCAATGACTTTgagaaattatgcaacttttctgtttttgttccac ccaatacgtcactttttctattgtttaagtgacgtattgggtggaagatt ttaaaagttctcagaagactctccggTGGTGTAAATCATGAATacttttg tttcaaaaattgaaatgaaaagcACCAAATTTTAGCAGAATTAAAATCTT GAGTCTATTTCCCGTAACATTTAGCAATAATTCTAAATTATAAAATTAGC CATTTTTGATAAAGCCATCTACCCCTTTTTATCTACTGGGCTAGCATGTA CTGGTTAGTAACCACATAAATAATAAGTTCTTTAATCCCGTCTTTAAAAT GTACCTTTTACTGTACTCTCGGGTAGCTACCCCTACTTTGTACCGCTAAT TAAGTTTCCACCCAttctgcttattccaaacccccgttTACCTGAGAGTA AAAGTGCTAAATTGAAATGATTCAACGCAAATTTTTAGGAGTCATATCAT TGGACAATAAATGTGCAGTCAATAGTTACAAACATCCATTCTGGCAAGCT AAATATCCACATATGATCGAACTGAAAACTCCAAACCGTATCTTCGTCTT ATGTGCTGATACAGAGGATTCGAAAAGACTTTGGTTGGATGCATTGCATG GAGCAATTGAACAGATTGGACATGAGGATAATCAGGTGAAAGAAAGATCT GGTAGTATCGACCCAGTAAGTAAACTTACCTTAAGTAAagataaattttg gcgaggattatATATTTGGCGAATTATTCGGccatttgccaaatttaatc cctgccaaatttaacaaaagagaattatgtgaaaaatcacaactttttag taaatttttgagtaattttcacccatttcagtgtgacaaaatttccaatt cgccaaattaaatacccgcaaaatttcacgaaaatgatctatcgccaaat taaatccccgccaaaaatagTATTTTGGCATTTGTTAAATCCATACCAAA AGGTAGTTCTCAGTCTTCTATATCGCACACttgcactcttttttataaga ataattttcaTAGGAATAGAGACAACGGAAAAGAACGAGGCTTAAAAcaa gaacaatttaaaaagaattctAGAGTCTTCAATTGCTTAATGTCAAGTAA TTGCTCGGAGCCCCttcaaaattaagaaaaataaggCTTCAACAAAtctt tactggttcttataaaatttcgctaaatattactaaggtaaaatttcaaa ttagcgaAAATAATCTAGTAGgatttcacaattttttaaaCTTGCGGGAT CAAATCTCGAGAAATTTAATCTAtgagaaaatgataaaattcaAACGTGA ATTTTTGTCCTGTGGACAAAGTAAACAGATAGTCAGTCAATTAACAGaca atatataagaacaaaattgaAGCATTGACCTTTTATAAAATAGAATTTCT TTTATATCTAAAGTTTCTTGCTAATATccttattaaatatttcaaaaaca tttcaagcCTTTGAAAGTTCTcagttttttttagattttaagcctaatat tgttcttaaagtgttcttatattcgccattttgtgagtatgttggttaat tttttaagaaatttcatgttttagaGTCTACTAAGActtaaatgaaaaat gttttttgaatgttcttatattgtGGACCTTACAGTCCTTGTGTTCTTAT TTACGTTCATACAGTATATAAAGATTTCATAATTATATaccaagaaaaaa ttgaaaaatatatttacattAAGGGAACTTTagcaggaactaattttcgc gagaaaaaaaaaaatcaaaaaatcgcATTTCGCGGGAATTAGTTTTCGTG GTTTATTCCCATTTCGGACATTTTGATTATATTTTCCTAGGGatctttcg aattttttgataaaaaatagcCATATTTGTAATTTGCAGGTCCTAAAAAA CGAGAATTATTTCCCTCGAAAGTTCATTTAAGGCACTCATATATGATATC AGGTAAAATAACCTCTACCAAATtaatcttttaataaaatccaatTGGGT GTAAATCGTTTTACTTTGAacaaatgggcttttccagaagaaaaccctat accccctgttgagaaggtccatttccgtttcaaggggggtaaggtttgat atgtagcggaattccataggggaGATACAAGAATTCCATGGGgatagctt tttaaatcctactaaaattcacaATTCCAGAGGAGGTtaaaacctgaaat tgcctgtaattccagggggttgcagcatttccagccacagaaggatagac ctcctcaacagggggatacagttttttttctggaaaagcccaatactgGC CACGTTGGAATATGAGAAAACAAACACATGATTGACATAAATATGTTAAA CAATTTACCCTATACACGCATGAAAGTATGTGAGTCTCGCTACTTAACTG CTGATAGTTTCAAATGACATACTTCAAATATAGACACTCTGGTGCGACAG TAAagacacattttttataagatcattcaaaattttggaagcctttaaat gttcttaacttttttagttttaagagccttaaaatgttcataacttGTTT TTAATCTTTTGCCTATCGTCGACTTTATGTTATTttacagtttgttttta tattaaAGTAAGATGTACCTTAAACAAAGAAGACACTTTGCTGTGACAgc aaataaataaagttatgAAAAGGGGGATTTACCACAGCGCACAGATTTAC TGCACGGTTCGAAAGATACAACACAAGTAACGTGAGAATGTTAATAATGT TTGCTGAAAGACAAAATTACATTACCATTCAGCAATCTAGGTAATGACtg atattttggaaattttcccgAAATATTGGTAAAAtgattttcatgtttta tgTATAGAATCTATTAAGTATCCCAGCTGGAaaacaacgttgtttaaacg ttcaaataacgttatttggacgttatgaatgtcaaatggacgttgtttgg acgtttgtgtgccagctgggataatATACGCAAGCATCTTAAAAACAATC TGTAGGTCTTAGCGTTTTCGGGGTAAGATTCAACTTCCCGTTANAATGTT CATAACTTGTTTTTAATCTTTTGCCTATCGTCGACTTTATGTTATTttac agtttgtttttatattaaAGTAAGATGTACCTTAAACAAAGAAGACACTT TGCTGTGACAgcaaataaataaagttatgAAAAGGGGGATTTACCACAGC GCACAGATTTACTGCACGGTTCGAAAGATACAACACAAGTAACGTGAAGA GAAAGTGAATAATGTTTGCTGAAAGATGAAATTACATTACCTTTCAGCAA TCTAGGTAATGACTGATATTTTGGAAACTTTCCCGAAATATTGGTAAAAT GATTTTCATGTATAGAATCTATTAagtatcccagctggcacacaacgttg ttttaacgttcaaataacgttatttggacgttatgaatgtcaaatggacg ttgtttggacgtttgtgtgccagctgggataatATACGCAAGCATTTTAA AAACAATCTGTAGGTCTTAGCGTTTTCGGGGTAAGATTCAACTTCCCGTT ACTATCACATAGATATCTTGAAAAGTGAGCTTTAGAAAGCTAGTCATTTT CCAAACTGTACACaagctacacatttttttataagaacaaactatataag atcataagacttcgatggccaaaaccttaagaacaagttaagaacatttt aaggctttgctgactctaaaacaatttcttaggaaaatggaccaaaatac tcacaaaaaactcaaaaagttaagaatatccgaaggcttcaaaagttttg gatgttctcataaaaaacgtgtattcccgGGCCTCTAGAAAAAGATCTTT CCAGTCTTCAGTCGACTGGCTATCCAGGTAAACAGCGAAAATCCAGACAG GAGAGTGGAATCTCACAAAAAACGAAGAACTAacactttttattcttttt cataGATTTACGCAACACTGTATGAAGTTTTACGGTAAATAAGATACTCC TTTGTTGCAGAAATGATAGGACCTCAATCCGAAAATCaacgaaaaagatt tttcttcgtTATGAAAGAAATGCTTTGAAATTTCATCCCCGTTAGAAAAG AAACTTCACCTTACCACCCATAAGCTCAAGAAATTGACATTAGGCTGCTT TGTCTCATATCAAGAAAGTTTTACAATAAATCCTCACTCGGTCAACTGAT TCCGATAAAGAAACAATATGAAAGTCGccaccattttgagaatctgaTAG ACCCCACCAATAAAAGCAAGAAATCTTCCAAGTCCATTGGCATTAGGCTT TGTTTCATACTGACTGGCAAATGAATCCTCACTCGGGTCAAGATCACCTA TATATACCCTGGACCCAAGCTTTATCCGCCAGCTTTAGTAGCACTACTCA ATGTTGGTCAATTTgtaattcaatgaaattttccgtttaaaagttttctt caCCAACATTGAGCTGGgactatcactttcaaaaaccTCTGAACAAAGAT TTTGTTTGGCCGAGATCGAGAAACTGTGTCTAGGGTATAAAGATCAGTTA GGACATTGACGATAATTTTTAGGGAAAAGAGACGACCATCAGAAAGCACA TGGAGTACTAACACAGACGATTCTGGTTATGGTGATGATCTACACCAATC ACTAAATCGTTCACAATCGAACAGCTCTGGAAACTCTTTTTGTACAAATT CTAACCACGATCAAATTCAATCACAAGGTATGAAGAAAAGTCAAACTTCT CCTATTTCTATTACATCTATTACATCTCTGTCCCATCTCTGTCCCATCTC TGTTAAATCTCTATGCCAGCTACTCTCAGGTCAATGTCCAATGTAAAATc tagcggtaaattttactttcaatatgGAATTTGTATAAAACCCACGcggg ccgctcaaggccgcgcaacttagGATTTGGCAGCTTCAAATCCTATGTAT CCTTACTAGTCCTTCGGACTTTTACTTCATTGCTTTAAAGTGTAATTCTA AACATCCGTTCACTATCGTTTATCAAGGATCAACAAATAACAATGGTCAA CATCAAGCATCAAGTGGACCTTCATTCAATAAAGATATCAACACTAAGAG ACTCAGCATGCCACATCATTCACTCCCCCAAAAGCCACCACCAGGGAGAA GTCTTTCAGTACCTGATATCAATGTTCATTTTCCACAAGCGGCACAAGAT GAAGATCTCTATGTCGATATGACTGATCAGGAGAGGTAAGAGCTTTTTCA CCACCACCACCGGGTCTATGTAGGTCAGTGGTTATACATTGCTAAATAAG CCCAAGTCAAATGTTCATTTAGTTGTTTTAGAGTCTCATTTGAGCTGCCT TTTCTACTAAAGAACTGAAACTGATCTTTTTCTCCCAAAATTTTTTATGT TATTTATTCAAGAAACGGAAGCCCTATTATCGtattggacttttccagaa aaaaaattgaatatggggggtggaggatataacacttttcagtgatttac cccccggacaaagtgacttttggcccccggacaacgggttttaccTCCCG Gagaagcatcagttgacccccggacaacccaaattacccccgcacagagc aaatttaccccccggacaaggcaaattttgatgatttttcgctacccccg gacaatatatcctccacCCCCCCCCCTAtttacggacattttctggaaga gctcaTTATTATCTCTTAACTTTCACTCtgtaatttctttcaaattccAC TTTCTCAAAAGGTACCAATACATCCAAAATGCAAGACAACAATCACCCCT ATCAACTAATACAAAATTTACGGGTTTTCCAAATCACATTGACGAAAACA ATCGAGTGGAAAGCCCCTATGCTAAACCCTACGATTCTCGACAACGTAAT GATAGCATTGTGGAAAACCCCCAAAACGGATCGGAAAATCTTTATGCAAA TAAACCTCAGCCAAGACCAAGGAGTAGCAGCGATTCACCTGTCTCCGTGA AAAAAAAGTAAGTAGTTTTAACACCTCTGTCGCCTCGCTAGTTGGATTTC TATGGGATCAAAACAGTCCTGGTGGGGAAGCAAATTAACttaattgatga aaaaattagatCTCTAAGTTGTTTATTGAGttgcttttttttttgcctCG ATGTCAATAATGACTGAAATTAAAAGGTTCAATTCAGCATTAGGGCTTTC CAAACTAATTCCaaacgaaatatttttatttctattatcATAGAAGTACG ATTTGAGGTCTCGTTGGAGACTGAGATTCAACTCAGGTAAATTACTAAAG CAAAGCccatttcattcattcattataGAGCACCTGGCAAACCGCCGAGA ACCAGTATCAGTGAGTCTGTAAAACGTTTAACAATTGGAAGTACGATAAC ATTAGAAATACCAAACAACTGCACCATCAACATGCAAGCAGATGGTCTAC TCAACATATCAACGCCCTCAGAAGAAATTACAATTTCAGTACACAAAAAG ACTGAATCAAAACCAATGTAAACACAATATAATTCTTGATATGTGTAAGT CAAGATTATGTCATCCGAAAAAACCGGATCTATTTTTATTAACACTCATG GGTCAAATACGGTGTATTCCGGTGTTTCCGATAAGGGAAATGACCTACGC ATACCAAgaataaaatacatttaatAAGATTCAAACATAAAATGATATAC ACTAAATGTTCAACCACTAAATGTAGCATGGGAAATTGAAATTGCAGATG TTGAAAATCTCTTCCCTATAACCCGATTTCTTCCAGTGTAGAGGTAGAGC AAGATTTCGTTATCGCAATTTGGTTgtactaaatttttttgatattcaGA TGTTAGTTTAAGattgtttttcataaaatttttgttAGAGAAAACTGTaa ataattcaaattaaaataatttagaatttatttttttatgtaGCGAAAAT TCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056387TCONS_00056387Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056387-proteinTCONS_00056387-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_275supercontigscaffold_275:45284..53687 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02 1.18 0.78 0.41 0.29 0.18 0.64 0.89 0.6 2.21 0.15 0.14 5.02 3.33 4.24 5.62 7.77 6.3 5.34 8.86 0.75 1.1 6.53 12.16 7.09 2.26 13.27 15.77 20.16 12.83