XLOC_035561 (gene) - C. hemisphaerica

Overview
NameXLOC_035561
Unique NameXLOC_035561
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_276:389615..398983+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035561 ID=XLOC_035561|Name=XLOC_035561|organism=Clytia hemisphaerica|type=gene|length=9369bp|location=Sequence derived from alignment at scaffold_276:389615..398983+ (Clytia hemisphaerica)
TTTCAGTTTGCACCGTTTAAATAGCTGAGTATCTCGTATTGGGTAAatca aatacaaagaaaacttGACCGTGTAAAGAAGTAatagaaacatttttgaa gaaaagatttggctgaaattttatatgaaaagATGACTGGAATAGGATAT TTGGCATGTTTGGTTGTATTGATTGGCGTAATTCAGGTATGTCTTCTTTT GATTCACTCCACCCTTTTAAAACCATtaacctttatatatccctgaacca agctatatccgccttCTTTGATCGaattgaattggtacccgagaagaagc cattgattgcaatgttaaaaattaacgtctaatgtcgctacatcatcaaa agtcttcgaggaaaagtagatctagcgctatcgatgcattttcaccgcta ttgagtagtgccgtcATTAAggtatcaatttcaaaaaaaacttcgatcaa agattttgattggccgggattgagtaacttggtccagggatatataaatg TCAGTGTTTAGAACAAGGGAATGTTTGAGACTACAAAAGGGCGTACCCGA TATTTTTTTTGGGGTGGGTTGTCACTTTTTTAACTTCTACGATAGGGACA AAAACACACCTAAACACCCGTAAAATAAAGGAACTGGAAGGGCTCAAAAC TTCAGGAAAcgattcgaatctttctttaatttaaaTCAAATTCCTGGTCC ATTTTGAAGATCAAATTTGAGAGAATCAACAGTATGCAAATTGAATTCAG CCGTGTAGAAAAGCGCAAACAgatttagtctgaatcgcataTCTCCACAA AACAccaggtagtataaggagcacgaatcagTTAGTAGATGGCAGCAGCC TAAAAGAGATTCTTATATTGCAGAGCGAAAATAATGAAAGGGTAAGGCAA GTTAGATTAATTaaaggcccccccagcggaccctcaattcacgtaatcac gcaaaccgctgtgGGGGGGGGCATTAAAGATCCACAAGATATCAGGGGCA TGGTCGAGCGGTAGTACGCTTTCCTAACCGAAAAAGGTTACGATTAAGAA CCCCACTCGAATCGACCAAATAGCAAAAATAAAGCCCGAATTTGTAAATA CTAACCAGGGGGGTTCAACGTGCAAATAATTTGCTAGCACTGTAGGAGAT TTTGAGAGTGTAAAACCTTTATACGGGAAATcttaaaatggttaaaaaac aatgaaaatcaataaacaacataTTTTGAATTCTAAACTACGAAaggaaa aataaactttaaaaaatcaagaatcGAAAGTGTTAAACCTGCTAATACGT AAGCGGAAAGGCTATTAAGAGCTGATTGCCAAATGACAAATTATTTACCA TCCTAAGTAAAAATGTTGAACGCAAGAAGTGTTAATAccagaaatatttt tatcttatcTCACATAAAGAGCGTCAGCGGAAATGCGTCTATGTTTGAAA AACAAGTGTTTCAAAAGCCAAAACATGTTTAAAAAGTGAGATAAGTACAC CcacgaaataaaaataagtttatGCGCGCGTGGATTTTGGCAAGATATAC AATATAAGCTGTCAAATGACCTGGCTTTCTGTGTTTCGTGTTTTTCTTGA AGACCACAAGAGCTTATGGTGCGCAACTCTATCTCTGTAGATATATGTTT CATGTTGAAATCATCTATCAATAATGTCTCCCTTTAttgtttacacgttt tttataagaacaaactatataagaatataaggcttcgatgaccaaaatgc taagaacaagttaagaacattctaaggctttgtgggctttaaaacaccca atctttaaggaaaatagacaaaaatactcaaaatgttgaaaataagaaca ttttgagaatatttttaggcttttaaacctcaaaaagttaagaacattag aagtcttcaaaaaattttgttctaataaaaacagAAGTATATGCATACCA TGCCATACCCAGCTCTACACCTACAGTTAACACTCTCTAAATCGATTTTC AAGAGGGGAACAGGATTTTCATTAAATAAAGGagcgtatcaaatagtaga gTATAATTTATTtcagtttcttgttgacggtgactttcatcgaataatgg agcgtatcggatagtagaacgtcgaattagagagcagtCAAGTGTATATC ACCAATTCATTTTACAGCCCTTAAATTTATATTGCATCACTAGGGAAAAA AGACATTTAACGAAAACATTGCATATGACTTTTACAACACGCCAAAACGC CATCAAACCCCGTTaagaattttggcaaaattttatgagcctgattgatt gattttgatAACTGAATGCTTGGAAAAACTCCAAGAGTTATTGAGATTCA ATCAATCATTCTTCATCAGAACTCTTGGGTGACTGCAAAGTGACTCTTAA AAGGCTTATACAAGATATGCGAGGTTAAGTGGAAGAAAATctattttgat ttgataaagaaatttccatttttctccgaataatttaattttaaaggcAT GTCTATGGCTCATGGCGATCTAGATCCATGCTTTTAGCTGTGGAAAACCT TGTACTTCCAGTCACCCATGATTTGAATTTCGAAACACAATTGTTGAgaa atgagacaggggtgtcaaatTTATCAATCAGGGTACACGAGTCAATCGGG CATTTCATGTTTGCAAGGAATCGCTTTTTCGTGTTAAGCGAAAAATGTTA AGATTTTGTCTCTGACCATCAGTTGGTAAGATGCTATTAGATAGCACTCA AGCCCGATTTTCTGATATTTGTAGCGATAGTAAAATGACCTGTAGCAAAG AGATAAGGAGAACcagtagacgatcctatcgtctacacattaTCACTGAA AAAGGGAAGAATTCAGCaagcgggataaatttgaaaacgagtttagttcg gggcggagtaaacagtaggctgctggcatccactaacctatactacctgt ggttttgtagaggtctgcgattcagactaagtaaacagtggcggaggtgt ttacagttttgttccaaaactctaccgccacttttttcccgtaaaccgcc ctgacgctctaactctttcccgcgtttactgacctttaaacggacgatag catcgtttAGAGAACCAGGAACTAAGAATGATTAGTTCGAACCCTTTATC TAAACTTAACGGATTAAATGCGTGGGCCGAGTAATACGCTTATTCGTCTG GGTTCAAAACCGATCAATCGAGGCAATGTTTACGTCAGTCTCGCTTTCCC AAAATGAATTAACAGTCATTTCTATAGAAaacgttttttgaaaatcaata aacaacagcGCGTAGTATATAGAGTATTACAATGATCTTGTGATTTTAAT TAGCGTACGGTGGGTCACATGAGTTTTAAGTTTGCTTAAAGGTTTTatga aatcaatcaaaaaaccgcaaaatttactATGTTGATTTCCTAGATACATT GTTTAAACTGTTTCTACCTGTTACTCAGAAAATAGTGGTCTTGCACAGTT GATCTATTTGATAGGACGCCATTTGGATGTCCTTAAGACGTAGAGTTTTC CACATGGACGTTATCTGTACGTCTACGATTACTAATGTTAGGTAATACAT GGAAAGTTTGGAAAACCCATAACTGTGGAGATTTATTAAAGTATAAGTAA ATATTGATCAagtttttttactactttggTGGGTTTTGAAGAGGAACTAT gaataaaagttatattttgttttgttgttcttGACTTTCACAGTTCCCCT CTTATTGTTAAGTGGACAAGCGGCATCTTTGGCTGTAAACAcaccatttt tttgaaactatTAGCAAAAACATAATGATGCAATGGTATTAAGATTGCTC TTAAATTCTGCACTGTTCTTTTTCAATTAGCTACTTTAGTTTTTAGTACC ACTCCttaaaatttttaaggtcaTGAGATTTCAACGTGAGAGAATTTTCA CATATGAGTGAATGattgaattcatgatattcattacgtaatgttttcta cgtggaaataccccggtttttgccagtattgactaattttaaacaatttt ttactAGCTCAAATTTCTTGAACCGAGGTATTTCCGCAGAAAACTTTacg tcattaatatcatgtatATAGCTAATGAGTTAGGTGAAAGGGCACAAAAA AAGGTACGATAGGTTTTGTAGGAATACGACGAAGGTTTGCCATGACATTC TACTTCGCCGTGCCGCTAAGGTTCAAAGATAAACCTTACAATATTTTCAT catttgaacaaaaattttagggaataaaacaaaacttctcagaattcttc aaaatcttttatgtttttttctcaaatagaCAACTAAGGAGGAACACTCT CTCGTGTAATCTACACACGAAATATCGAAACTTACCATGTTTGACATTCA AAATGCCTATACAATGTTAAATTAATGTTAAGGCATTGCACGTAATAAAG GGCGTTTCAGGGTGATTTATTTCAGGGCGCAAACTAACACACAACAAGGA CTTGAAACAAACAAATCTTGACACTAATGAGttttttttgacatgaaatt gGACGCTTAAGGATTGCTAGCTTACAATGGAGAGTCTAAATATCTATctt aaaaataaatatcttgAAAGAAAACATCTGTTTCCCGGAATACATTgata atcaaattttctttattcatcTTAGACTTTTTAAAACCATCATGAACAAA AGGTTCTGACCCTTACTTTACCTCTTTTGCGAATCCGAAGTTGAAAGAGA GGCTTTACTACCGGGGGAGGGGGTTGTACTTGGGAAAAATGAGTACGGAG AAGTACCTCTAGTTAGGGTACCTCTTTttacctccacgagtcccacatag ggtcgcaaaaacaccaaaatagaaaaaccaGTCCCTCGTAGCTACCTTTT TGGAGGAATTAGTAAAAAAGTGGAAAACTTTTAAGAGCATTTCTGAATTC AGAgtcacttttttctcaaattttggcaaaagtttcaaaaagtgACCCAC GTTGAGtccattttttcaaacctcagcgGAAGACCCTCGCCAATCGGCAA GGGTATTACCCCTTCCCTGAGAAAGAGAGACCCTACTGTAAAAGAATACT TGAACCTTTTtaattattgaatttgatgGGTCTTTTTAGCAAACAGAGAA CAAGTGGGTATGAATTACATATGCAGGAAAATGTCATTTTCTCAACACAA ACAAAGAGATCTAATTTCACGCTCATCTCGTTTTAGCAAGAGGTATTccg tttgcaaaaaaaaataggtGCGAGTTTAGTGTTTCATAAGCAAATCGGAT ATTATTGATTAATTATCTCAATCTCCTGGGAAGATTCCGAAAGGAATAAA ACACCCCTGGCTCACAGCCCCGGCATATTTCCCCCACAGCAGGGATAAAA AtctctattgaaatcccaatgggaataaaaattatattgctCCAAGCTAA AAAATTCAAGTAGGGTGGTTTctgagtgcaattttttacatcgAATTTCA AATGCGGATGAGATGAAAGCCAATGCCTAAGTGGGGCTGAAGTTGTTGGG TATTTTTCCAATCTGGGTCTGTGTAATAAAGTCAAAATTCTTCTCCAAAA CAAGAGAAGGCAAGTATATGTGGATCGTGtactttagtttttcttctGAT ATCAAAGTAAAATTAAGCTTTATTTTCCCATTTCAGATTGTAGCTGCTGG ATTACAACTCGAAATCAAACTAGAAACATACAAGAACCCTGGAAACAGAT TGGCAGATTCAGAAACATGCTGCGAAAGAGATCAATCAGTCTGCAGAGCA TCGTGTTATAATACTCTCATATTATGTGTATCCAGCATGGCAAATAAAGG GTCATGTGACCTCGTCAACTCGATGAAGgtcaatcaaaaagaaatttatg atGATGAAAGCTTCAATGAGGGTGCTGATGAACCTCGATTCCAAAATCCG TTCAAAGTGAATTTACCGGCTGACTATAAGCAGGTTTGTATTAACTTTTG GTTATGCTAACTCTTTTGTTACATTTCAAATATAATTTTGTACATTTCTg tatactttaagggcagaaactttcgcgggcagaaactttcgcctttttcg cgaaggtttctgccaggtaagaaattaaacctgaaaaatgcgaaattttt tttcgcgaaaaataaactttcccaCTCAGTTTTGTactgtttgctaaatt tttgcgtgttttatgagtttttgttaccaaaaaaggtcGATTTTGtatga attcgcgaaagttctatCTGTGAGCTTTTCGGCTAAAACCATAATTCGCG AAACTTAAACTcgctaaatttcgcgacttttcgacttcgcgaaactttct gcctgcgaaactttctgcccttaaagtaattCAATTAAAGCTTAATTGAG ATAGCTTTTTTAGCTTAATAAAACCTCTAACAACCAACTACCAAGCCATC AATATCGGATAGCGTTTCAAATATAACTTTTTGGTATTTACAGGGTCAAG TATCAATCTCATTTCGAGTTTTTCAATCGGGCACCATTTTGGCTGCGCAA TTTGATGACATTGTTGTTAACATGGATTCCACGTTACCATGGCAATCTAT CTCCGTCGCCACTGAAGAGTCGAGGAGATATCGGCGTTTCAAAAAAGAAC TGGAATTTAAAACAAGGTAATATTTGATATGATGTAGATGCTGACAAAGT CCCTTCAAGATAAACGAAATTGTATTATTAAGTTCTATCTGTAAACGTTT TTAATAaccataacgtttataagcatttacATGTTCAGTTTTTAGTACCT agacaatggctctattgttaaaaaacaatagaatgctaagcataatgcga gcctgatataggggcactttcttataaaaaaaacatgcataTTGCGGatt ctttcaatttcatttttttgtaatcACGTTCACATTCATCATAAAAATGA CCCTTTGTAACTTTCTTCCCCTTGAAGGGGTTCCAACTACGAAATATTGT CATTTTTAGTGATCGCATAcgaaaattataataaaaaatcataataaaaa ccAAAGGACTTTTGATTAAGTCGATTGCATATTTTCAGGGAAACCAGTTG AATATAAAAGCCCTAATTTTTTACAATGTTAATAAATTTCATCAATAGAA CTCTATGCAGTGCAGACCATATTGGCAAATATTGTGAAATTGCAATATGT AAACCGAGAGATGACGATAAAGGGCATTACACATGCACCAGTGATAATCA GAAAGTCTGTTTACCAGGCTGGATTGACCCTTCCACAAACTGTCTTACAA GTAAGTCATGATTTACGGAACCTTTAGTAAACGGATTCTCTGAAAAACTG GACAATCTCCTCAGCAGTTTCTATTCTGGTACAAACAGTTAAAACAATGT CTATCTAACGTCCACATCATAACTTTGAAATAACACCTGGTGGCTTTTGT TAGTTTTGATCCTAAGAATCATGATGGAAAAGCTGAAGAATTCAACTTGC CGGATCTTTCCAAATAAGGATTCTGATAATTTGCTTTTACTaagtgaaaa aaatatgataaaacatTTTCGATTTCTCTAGAAAAAGTACAACCGACGTC ATCAACAACCATTGAACCATCAACCAGCATAATTGAACCATCAACCAGCA TTCTCCAACCAATGGAAACCACCATTTATCCAACATCCTCTTCTCAGCCA ATCACAACCTTCCAAACATCAGTATCCACCAATGAGATTCAAGAAACAAG TCACGTGTTTACTTTGGCATCAAGTAgtctaaacaaaaaaatgatgacTA AATCAACTGTATCTACAACAACTCGAATTCAAATCTTGAAAACTTCAATT TATCCAACGAAATCGACGACAAGAGAGCAACCAAGATCAACAACGATCCT AACTTCAATTCCAAAAACAAATCCTCCCAAGTTAACAACAAAACTACCAA CAACTGTTAAAATCGAAACTGAACCAACaatcaaaacaacacaaaaGAAA TCTACTCGAAATACCTTTCCAACAGAGGAACCTATCACTCAAATACTCAA AACAACCGAAAGACCAGTAACAAAGAAACCTCGAATAACTCATACAAAGA GACATACTAAGCTAACAACTACCGTAAAAATTAATACAGAAACTCCAATC ACtacacaaaaacttcaaactgaaGAGATGGAATCCACTAAGCCGAGACC GTCTAGGAAATCAGGTAGCCAAGAGATTTACGAGGAGCGCGAAAAAGCCA GAGTGGATAATACAGTTTTGATTACTGTGATTTGCTTAACGTTAGCCATG GTAGCTTGGGTTGTTGTCCTTGTTGTCATAAGAAAAAGGTAcgagttatt tttatttttatttttaacccTTTCGTGCATCCTTTATGGTAAACTTTGAA AACCAATAATTAGATGCCACTTTAATAACATCTTAAaccaattaaaaaga aatccccaaatcaaaaggaaatatttcagcTTACCTGAGATGAACGAAGC AAGCTATTACTGGTCTCTGTGGTTACAAAGCAAATCAGTTTGTGAGCTAA GCAATGCAGTTTGCAGAGTTTGCAGTTCTTACAGCGACAACAGCGAATAA CCTAAACAAAAAACGTCATTGAAattatacattgtcttattttttttcca gggtGAAATCAAAGAACAAAATTCATTCATCCATGATGCAGAAATCTGAA ACATACATGATCCCTGCATCAATGGAAAGTAGTGGCAGTAGTGGTTCTGG CACCAATGAGAATATGGTTAGGAACTGTTCTATATCATTAGCgaatcaaa actttatggaAACTAATTTAACAGAACCCATTATCTAATATGGTTTTGTT GCTGCTTCGCCAATATCTATTCAATCGATAAAAATCGGTTATTTCATCGA TACGATCTAAACAAGATTGTTTTAAGAAACTCTACGTCATAAATTCATTT GATGATCATATTCAAGCTTCAAATCAATACACACTGTAAAGACAGAAGAT GAAAAAACTAAAGCTTTGTATTGAAGATTATTCAGTAAATTGAGTAAAAT TGAAACTTCAGAAACTGAATCATTAAAAGCATTGATTAAGCGAACAAGCA CGATAGAGGAAATACACCAAGTTTACAATTGGTCGTTTCTCGGACGATGT ACGATCCATTTTCGGACAAGACAGTCAAAAACGTTTTCTTAAAAGCTTCA AGAAAATCTCTCGACTTTTATTTGGTTTACAAGTGGAACGATAAACTTTG GATCAATTCAGAAATTCAACAACTAGAAAAAAAACTATCATTGAAGGATC TTTATTTGAACTTTATTTGGtccaaaatttataatttttaatatcctttt ctttaaaaatatttttttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056429TCONS_00056429Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056429-proteinTCONS_00056429-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:389615..398983 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.03 0.04 0.02 3.11 2.35 5.82 6.18 6.14 28.28 13.35 9.25 15.71 9.76 8.23 21.78 7.11 14.53 10.35 13.12 2.22 2.23 4.89 3.81 6.74 5.33 0.21 0.2 4.06 3.44