XLOC_035827 (gene) - C. hemisphaerica

Overview
NameXLOC_035827
Unique NameXLOC_035827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:707973..714714+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035827 ID=XLOC_035827|Name=XLOC_035827|organism=Clytia hemisphaerica|type=gene|length=6742bp|location=Sequence derived from alignment at scaffold_284:707973..714714+ (Clytia hemisphaerica)
TTGACTTTAGAGCTGGCTTGAAAGGAAATCCTTGGCTCAGTGTTTAGAAA TACGTGGTTTTGAGTAACAGAGGAACAAAATCTACGCTTTCCTTTAAACA GCTGGTCTGTGTAGAAGATTTGGGCCAAAGATGGTTGCGTTTAAACCAAA ATGCAAATTATTCTTCATATTGCTGGTTGCCATAGTTTCAATTTATGGAG CGCCAAAAAAACTGAAATCGCATTTCAATCAACATCATGAGACGAAGCAT GAGACGAAGCgccaatttcacaaaaataaaaatcttgatCATATTATGAG TGACGAACTCTCAGGAACATCTTGCGATAGTTTTATCGATTTAACAGCAG GTTGGAAAACAGGTCAAGATGGTTATTTTGACTTTACCGTCCCTCAAGAA GTGAATGGCTGGAAAATTACTGTAAGTAATGGTTGGTCGAATCTtaacta tgctatagtctaagataAATCAGTAACTAAGAAATAAGCTCAAAGGTCAA GAAAATTCGCAAatggtttttttgccgaaaagagtttacagccggtagGG TTTGCCAGTCTTCaacgaaactctcccgccggtTTTATCCGTTTACCGCC CTAACGGCTGTAAACTCTGTGCATAGAATATTTCCCGCCTTTAATAACAT CGTCTAGGTCAAATCTCGAAAACTCGAATATTACTCTTGTTCGAAAATAT AACATTCTTGGATATTAACTCATAATTCCATCAATCCATTATGGAATTAT CCTGGCTATAGATGCTCTTCTTTTTTCCACAGGTGGAGTTTACAACTGCT ACAAAGTTCTTCAAAATTTGGGACGCTAAAAAGATGAGTGGTCCTGGACG ACAATACATCTCCCAGAACtttatatataataaaaaattatcagcAAACT CAATTTTTGAATATCGCTTCCAATATAAATTTAATGCTGGCTCAaatcca aaaatttcttttatcaaGTTTGAAAGTTCTGATGGTGGATTTAGCATGTC TTGCGGTACATCCGATCCGTCAGTTACAGTGCAACCCAAACCCACCCTTC CGCCCTTGGAAGGAGATTGTTCAGACTTCGTTAAGATCAATAAGAAGAAA TCAGGGAACGGTGTGGAGCAAGGAAGAATCCGTTTTGCGTTGCCCGGTGA TTTATATAAAAGATGGAAAATGAAGGTGAAAAATTAACTTCTGAACTGAA TTTCTTAATAGagattttcgcgattttcgtgaatttgcTAAAATTTGCGA ATTTAAATGGATGCGGTCGActgtctctaattcgaactcagATGGGGAAT cttttttgttcaaattataaaaaattcgaaTAGTCGAGAGTCTACTGTAT TCCTGATTCGCGCGAAATTGAATTCCCGCAAAAAAAAGTACATTCAAATT TGCTAATCCTTTTTAGACGCCTGGttacaaaaaaatgtcttgatgTCAGC TCATTTTGACGCTTCGATCAGATTTTTAGAAATGGGTTTTATTTGTAATC CTTATTACAAATAATAGACAAGTAACCAGAACGGCCCTTGGCAcaatatt agcgagtttatgtattcaagataaatcgaggggaacggtataaagcaaag ctgacaCGTCTCCAATAGACCGTCGTCTATTTAGGTGAGAAAATGCGATa aagagccgtacatcaactatcgactttgttttgtaccGATTTCACTTACC CTCGATATCCTCCAATACATAAAATCGGTATTGATTATCCGTACTGATTG TTACAAGGCACTGTTTCTTCCAAAACGAACTTGAATTGATAAAGCGCtga ttcttcaaaaaaaaaggaCACACAGCACCACGGACAGCAACATGCTAATA AAAGGGCCGATGCTGGgccaaaaaagttcttttttttgtcCTTTTATCTC TATGGAGGAATTAATTCGGTCAGAAAATAGCTTGTCGTAACAAACTCCAG TCTCTAGAAATCCTAACGTAtacttttttgacacatttcctTTATCCATA GATTGGATTTGCAGAAACTATCGAAGGAAACTTTCAAGTACAAAAAAACG CAAATTCGATTGGAACAGATGCGCTGTGTTCTGAAGCTACATTCTATAAC TATGAACAAGCAAATGACAAAAATAGGTGATTCGAGCTTTGAAGTTCGag ctattttgattttttttaatacgAATGTAGTCCTCTATTTCCCACAGATC CGGTGGGATCGATTTTTCTGGTGGGAAAAACCCAATAATTTCAGCTCCAC TGGGAAACTTCAGTAGCTTCAAATTAtttataggcccaattgtagacctc cagatatttacccaaggaaCAATTGTGCCAAATCtcagccaaatccaaca atttttgaagactccaggctgtcccaaagttttagcatcgttttggtgaa aaactcgtccccagacgtcaaaaatcaaaatttccaaaaaatgaaaaacc acctccagatattcacccaatgaacaagcgTGCCAAATCTCAGCCAAAtc taacaatttttgaagtccccaggctgccccaaagttttgggaatTTTTAT TCCTGCTGTGTGAGATAGTTTGACCGGGGCTTATTATTAAGCAGGGGTGT TTTAGATTTCGGCAGGCTAAAGTCTTTAACTAGAAAAGTAACTAACAATT TTTTCAGATTCGACTTGTTTTTGGAGGGTAAAAAAAAGgacgaagcaatg tttttatttgaaaataagggactggaaatttgttattcaagttggtttca agaattatttcttcAAAATGGTGACCTGACGAGTTTTTACTATGGACTCA GCatcatcaaaatcataaaaaaagtatCAGAAGTAGAGTCTAAGTCTAAT AAGCTAATCaaaatattcatattttttagatttcgagcTGGCAAAAATTT TATGTTCCCGTACATGACACATTACAACCGAGAAGAAGAAAGTCCAACTA TACAATATATTGAGATCAGCGATGATAAAGGCAACTTGTACACGTGTGGC AACAAACCAACCTGTCCAACAACCACTCCAGGTACAACCACCACACCTTC AGAACAAGAATCTACAACAACTGAGGTAAATACAATATACTGGtagaata cacctttttgactgtagctgccaattgccgcgcgcgcattttttgtccgt tttaccaccctaaaaccgtccctaactttttttcgcacctaaagataata aaaaaaattgtaaaagaagcattggatcgagtttaaggTGGTGGTAAATT AAacaataaagtggcacgcgcctgaccacgagactacggtcgaaaaaagg tgtattgccgTTTTAAGTTAGTCTATTTCATAAGATTCGTGCTTTtatta catgattttttctaCGTCAATGTGGTAATTGATCTTAGTTGAGCAATCTT TTGCGAATAGAGACAAGTTTTACAAAtataacaacaaaagaaaagagttc ATGAATTACCAAGTTAATTGAGTCCCgaagaaaaattaagtttttcaacg TCTTTACTTGAATGGAAATCTGGAAATACTTGTCCATTTTTTCATTATAA TCTGGACAGAAAATAACATGTAACAGatgcacgaatcctatgaaattacc gttttaaatggaaaaaaaattccgaaCAATTTGAGACTTGGTAATTAGGA TAATGAAGTCCTGTTGATGCACAGGGAAAAAGCTCCACAGTCCTTTATGC TAATTCTTTTAAAGCTAATTGGGTAGTATTAATATCAGAACCCTTATATG GTGTCCTTGTGGTGATATACGAAGATATGAAGAATCTCCCCCATTTCAGC CCTAAATGTTTTAGCCAAATCTATATTTAAATATTTCAGTTATTCTAAAC ACTGTGAGTTTATgagttttgaaagattttacgTCTTTTTATCCGGACAT ACTACATAGCATTGAAAAAGTATATTTCAATTTCTTCCAACCATTTGATT TCAACAGATCAAAACTACAACAGAGGAATTAATCACCACAACTGAAGCGG CTCCACAACAACTGTCTGGAGACGATTGTTCTGATTTCTTGAAATTTGAA GTTGGATATAATTATCAACAGGGTACATTCAATTTCTTGGTACCACAACA AGCTGACGACTGGCAACTTCAGGTAGGTTAATTCACTCAGCGAAATAGAA TAATCTAGAtcattttaaagggacataaaagtactgatgaaatttgtaaa caaaccgcaTGCAgcaggatacaaaatcaaaacaaatgtcattttaaagg gacataaaaatagtaaaatgtaaacattgcgcgaaccacgtgtcattaaa gagaacaattaaaatcaaatgtccaaaacaaacttgtaaaacaatgggac aatcaaaattagccatattcggtttgattttttattttgacatgtgacat ttgttttgattttgtatccgctgcatNcaaacttgtaaaacaattgaaca atcaaaattagccatatttggttagattttttattttgacatgtgacatt tgttttgattttgtatccgctgcatacagtttgtttacaaatttcgcatg tactgttatgtccctttaatgtcgaaataaattttgatattcaGGACCAC ACTGCACTTTGATAACAGcgagtttttgttgttttaaaatGTTCGAGGTT TTCTAATCACACGATAAAATCGCCTTTCATGAGCACTATATAAGAATTCT CAAACAGGGACTGGATACAAGTTTTGAGATTATTTGAAGCGCAATCACTG GCCCGGTGGAATAACCTTAAAAGTGGAGGGGCAAAAGGATCTAAATGATA TAGAATTTGCCATGAATTGGAGAAAAAAGTCTACTTTGCTCAAAATTGGG GAGGCTTCAGTCTAAGCCTAAGCCTCCCAATTTTCGCCGGGCCTGAATCA TTACTGATTACTTGATTTGTTTCGAACGTAAAATGGCCAATCTAAAGAAC TCTCTATTTTGACGAAAACGGTTCTTTGCATggattcttttcaaaacatc tAATGGTGCTTCAGATTTCTAAAATTCACGAGAATcgtaataaaaatgac aaatCTCTTTGAAATCTAAATAGtagagaaaaacaaaatcattacCAGTG GAAGTGTACTCTGTACTATCCAGCTGGTACACAAggctgtttcaacgttc atttaacgttacatagacgttgtgaacgttagataaacgttgaaacaacg ttgtgtccCAGATGGGTAAAATGTATCTCATGCAAAAATTAGCGGTACGG GAATGAATTTTGGTTTTTCCGTAGATAACGGATCTTTTTATAGACAAGAT GGTGCTAATGATTCGATCCACGTGAAGTAGCCAAATTACcaaagaattat ttttcatattagGTTGGATTTACACCATCCACTCGACCAGAACGTCTTGA TGTATATGGTGCCAAAGCAATGCCAAACAACCCTGGCAAACAATGTCTCT ACAAGTTTAAGAATGAAGATTATGATAAATATGCTGGTNTTGGATTTACA CCATCCACTCGACCAGAACGTCTTGATGTATATGGTACCAAAGCAATGCC AAACAACCCTGGCAAACAATGTCTCTACAAGTTTAAGAATGAAGATTATG ATAAATATGGTGGCTCAAATCCTAACAATGTCTTTAAGAAAGGATACAAA TTTGACTTCATACATGGAAATGAAATGAATATCGAATACATCCGTTTCTC CACAGATGAATTCGAAACGTCCTGTGGTACTAACCAATGTGAAACGGAAA CCACCCCTGGTCCTGTTATCACCACCCTCGCCACCACCACCCCTGAAGTG ACTTCCCCGCCTCTAGGAGGGGAGACTTGTGATGCTTTTGTTGAGATTAC AAAAAAGAGTGCAGGACAAACCTTTGGGATCATTCGAATCACAACAACTC AAGATTTGACAGGATTTCAATTGATAGTAAGTAATAGTACATTCTTATTA GTTATCCTTCCCAGGGTCTGTCTTCCTTCGTTTGGTTAAGAGTCATAAGT TTATTCAAAGCCATTGCCATTGTGTAATTTCGCAGATAAGGCCTTTCCAA ATGTCACTTAGGACTTTATTTCACAGACGACAGATAAATCCGCgaaattc taattttaaattcttattcttatttttcttaaatattttaGTGCTCTGTA TTATCTTTTAAACTGTATATATATTGTTAGATTTTAAGCATCGGTTGgaa aatggcaagcaaaacaaaCATGAGTCGCAATTTTTAAGCCCCGAAGCTCG CTTTATGTTTTCAAACGGTTGTACATCGGGTTACAATTTCCCAAACTCgt cccgtgtattccaggctttatttaagTTACTGATGGACATAAgcattatc tagcgctatcagtaagcataaaaaagctgaaaatatgcAGGGAACGGGtt ataatttccaaaaaatcaacaCAAAGAGTGGCGTTACTGGCTCTGGAGAT AAAATTTGAGATCCCCCAAAAGATTGATAAGGTTGAGGAAGGATGGAAGT TAATTCAGTGTCTTTAACTAACAAGTATTCTGGCTTTTAACTTCAGATTG GATTcgagtctgtgacacagggattCAACATTGACAATGGTGTCAATCGT ATCACTTCAGACGAAACGTGTCCAGGGTACTCTTACGTCTTTCAGAACAT TCCAAACGGAGATATCCCTTCTggaaccactttcgttttctctttCCATA TTAATTATGATCAAAACAGTGGAGATGAACCGAAGATTGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056869TCONS_00056869Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056869-proteinTCONS_00056869-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:707973..714714 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0 0 0 0.03 0 0 0 0.02 0.06 0.49 0.01 9.89 13.75 0 0 0.01 0.01 32.78 59.14 0 0.03 0 0.02 0 0 0 0 0 0