XLOC_036153 (gene) - C. hemisphaerica

Overview
NameXLOC_036153
Unique NameXLOC_036153
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:584325..588435-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036153 ID=XLOC_036153|Name=XLOC_036153|organism=Clytia hemisphaerica|type=gene|length=4111bp|location=Sequence derived from alignment at scaffold_288:584325..588435- (Clytia hemisphaerica)
CTAAATCATAATAATAAATTTTGATCATGTCTAAAATATTCCAAAGAAAC
CTAAAGAAAAATGGATGTAATTTAGGATTGTGAAAGGCTTAACAAGAGTA
GCAATCTATCAGATTTACACTCGACTTAAAAAGCATGCTAAATCCTACTG
ATCACTTTATCCCTATATCTCCATTAGTTACAGTTACAAAACTTCAAACA
GAATCATCAAAACTTCATGCTTCATAGTCTTTGATGTCACACAGTTAATC
ATTGAGTATTTGATGCATACAAGAAAAAATTCAAAAATTCAATATGTTGC
TGGAGGCTTGTGTTGTACATTGAAATTTGTTTTTTGGATGGTGGTTTTGG
GTTGTAGTACAGAGCAAAATAGAGCGAACATTTGATGTAAATGGCAGCTC
TGTTAAGTGAAACCAAACGAATCGGTAAATTTTCTTTTTCTATGTAATAA
TAGGTTCCTTTCCATAAAATTACATGCTTTTGAAGCCTTTAGATGTTCTT
AACTTTTTGGACTAAAAAGCCTAAAAATGTTCTTAACTTGTTCTTAAGAT
TTTGGCCATCGAAGCGTTATGTTCTTATATAGTTTGTTCTCATAAGAAAA
CGTGTAACTGACAAAAGAGAAGTGGGTTAATGTCCGCCAATCAGGAACAT
GTTTTTTATTATAAAACCTCCAAAATCTTTGAAGCCTTCGGATGTTCGGA
AATTTTTAGTTTTGAGCCTAAAAATGTTCTTGAAATTTCACCATTTTGTG
AGTGTTTTTGATGCAATTTCCCTAAGAAAATGGGTGTTTTAGGGTCCATA
AATCCATAAAAAGTTCCTAATTTGTTCTTCATGTTTTGGCTATTCTTATA
TAGTTTGTTGTTATTAAAAACGTGTATCTGGTCTCCATTTCTTAGAAGAG
TTTAAACACCATTCTAACGGGTAAGGGGTACACTATGTAACACATTCTTT
TGACTTTAACCAACAGTAGGAACCTTGGAGCGCCGCGACCCATGCACCAA
TTGACATCGCCCATACATGCGGTACAATCGGGCATAGGCTTTCGTGATTG
AGTTTTCCTTGGAGTTGCCCTCAAGAATATTCAGTTTTTGTATTTCTAGC
CTTTCTGTGATTCGTGTTTTGAAAGCGTGCCAATAAACATTAAGGAAAAA
CAAACCACTCCACTGCTCTTTAGAAATACTTAAAGACTTAACACTTTTAA
AAGCTACCTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGTGGAAGG
TCGAAAAAAGTTTTTTAGAGGGAAATTAATTTGGCGGATGGATGAAAAAA
CTAAATTTGGCGGGAATTTAATTTTGCGTTTGCTGAAAAATGTATCCTTA
AAATGGCATAAAAACAGCAAAAAAATATATGCAAAAACACCTTAAAAGAG
ATCATATTTTCAAAAAGTTTAATTTGGCGGGAATTTAATTTGGCGGATGG
TGGAAAAAAGAAATTTTGGCAGCAGGAACTTAATTTGGCCAAATCCGCCA
AATTTTCTTTCCGCCAAAATTTCCTCCTTTTAGGTAATCAAGATTTTGAG
ACGTTTTTACCTTAATTATCTCTCTCTTTTCCGTTTTTAGTATGCATTCG
CTTGGCAATAGTATTGTTTATTGCCTCCTTTTCGATACTATTTACAAGCT
TGGACAGTAACCTATTACTAAATGCCGGTGTTGGATTATGGGCAGCGGGA
TTTATAACACTCTCAAGCATATTGTTACTGATACCTTTGGCAAGAAGGAC
GTGTTACGTTTTGTTAGTGCATCTGAACTTATCCATCTTGGGCACGCTGA
CGGGTATCGTGGTCAATGCATTTACACTGAGGTAAGGAATTTTGTTCACA
GAATTTTTATAATATCCCACCACCTATGAGAAGTGGCTTTTTTGCAACAT
CACCTTCAAATAGGGGGAATTCTGAGATACGATACTTTTTATTAACGGAT
AGCATATTTTTTTCAAAGATTACAGAACAAATATGATTTTTTGAATTGAC
TTGACTTTAAGGTAATATTCATTCTACTTCTTCACATAGGAAGTTGTTGT
GGGAGAAGGACTATAAGCTATCAANTTCGTTCTATTTCTTCACATAGGAA
GTTGTTGTGGGAGAAGGACTATGAGCTATCATTAGAAGCATGTACAATTT
TATTAGGTGTCACTCTCGTCCTGATGTGCATCGAGATTTTCATATCAATT
TATTTGATATGTTCTTCATTTCAAAAAACGAAAAGTCAAGGTAAATTCTA
CATGACTTATACATCAAAGTATATGCTTATTTACTTTTTATTCTCACGCG
ACAATGACCCTTTAGTACCGAAAAAATGTTGACTTACTAGTACTTAGACT
TTGGTTTTAACCTATGCAAAAGTGGGTATTCTTGGGTAACTAGCCCAATG
TGTATATTGAATATACAGGTAAATACTTGGTCACAAATCAAAATACACTT
ACATTGATTGACCTTTCAGATATCCAAATTCCTCATCTTTTGATCCAGGG
GAGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAACTGTACTAAGTGTACCAAGGTGGTGGTGTTACTAACTTCTT
CCGAGAAAGCAGTTAGTAGGCATGATGTCTTGTACTAACTGCTTCACCCC
CCCCTGTTTGATCTCCAAATTCAAACATATGCCAAAATGTCTTGCAAATT
TTAGTTTATTTTTCATCATTTTATACATTTTCACTAAAAATAAAAGAACA
ATTACTATTTTTTCCATCTTAGGTATTACGTTGTTGGAAAACAAAGGTTC
AGAGGCCAAGGAGGGTTTACTGTTACATCAAGACCAAAAATTCAAAGAGA
CGTAACTGCAAAACTATTTACAAAATATGTAGTATTAGAAACTATAATTG
ATTTAGATCTATATCAAAACCTGTATTTTGACCATTATTTTTATATTCAC
CTGTAAATATATTAACTCATATAAAAAGTAGTACAATTGAAGGAACCCAT
TGACTATCTTTTTTTCCTCGGGACTCAGTGAAGTAGGTAAGAGTAACACA
ACCCAAATTATAACTCTTTTCATCCTTTGAAAGTTATCCTCAATACCCAA
AAAAGCAATCTAGGAAGGAAGAGTGGCGCCCTCCCCTACCATCGGATAGA
CTTCGAGTCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057385TCONS_00057385Clytia hemisphaericatranscript
TCONS_00057384TCONS_00057384Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057384-proteinTCONS_00057384-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:584325..588435 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.07	0	0.04	2.39	1.61	11.68	10.89	7.47	8.01	5.23	5.6	7.57	7.64	6.12	7.91	4.37	5.3	9.7	5.58	5.07	4.49	0.62	0.97	0.85	0.86	0.2	0.22	0.92	0.73