XLOC_036255 (gene) - C. hemisphaerica

Overview
NameXLOC_036255
Unique NameXLOC_036255
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_291:175784..182686+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036255 ID=XLOC_036255|Name=XLOC_036255|organism=Clytia hemisphaerica|type=gene|length=6903bp|location=Sequence derived from alignment at scaffold_291:175784..182686+ (Clytia hemisphaerica)
ttagaaaacaatgaaataataataaaaaagacaaaataaagaCATTAAAG ATGTTCAGTATAGTTTCAATGCAAGATGTAATGGTGAATTTGAAAGGGAG TGAAAACCTCTTCAAAATGTTTGACCGCCCACgaacaagaaaaaaaagta CAAGCTCAAAAACTCTCATAGGTATCTCACAAACTCATTGCTCATGTTAT ATTCATGTTATATTCCTTAATTGGCATTATAGACTACCTCTTAAAGAAAA TTGCTTCCCTCagtgtttcttttcaagaaaTGTCTTTACTTCTTTTAAAA TGCTCTTTTACTATCGGTCAATTCTTTGCTATAAATAACCTTTTGTCAGT TCTTTACGAAGTGATTCATTGTTAACTACATCTTCCACTATTGTGGAATT AATTTCTTCTGTGTTTCCTTTCACAGGAACACAAGACTTTCCAATCAAAC GTGTTTGGGTTTTACCAAGCCATTTAATAACGCTAGTTTCAATCCGTGGT AAAGAGGAAATTTCAGCTTATGACCAAGTACCGAGACTGGCTGCTTCGAA TAAACACAACGTTTTTAAACTTATGGAGAACGGTAAGAATGTTTTAGTAT TAATACAAAACAGTGGTacagaagaatctctcgaaacgtaaccaaacgta aatctcgtgattcAAGCCCCGATAAACTTCCGAATAAAGGATGTATTACC TACCTAAAGCAATAGGAGACCGTGTCTGTTTTCCAACCCATTACTCTTAG GTTAAACGGGggtgttggaaaattttcaaaattttaataaactggggtac ccaaaaataaggtgaatataggctaaaatcaggctatttagtgCAAAATT AGAAACCTTCTCttacaaagatgaaaaaattcttaaaaaataatatacGG GGGTAggctaataaggtccggggggggggttagtaaattttcgaaaaatt aacaagcgggaggGCGTTTATTTAAAGAGTACGTTCTATAACTTTGGAAA GAAAGCAGACGATCTACTGAATAATTGCTCAACTCCGAGCGTTTTAACCG GAAGATGAGCCTTGAGATCTGCTCATAAATTACGTTTTCCCATGCCTTGA TTAAAACAAACTGTTAATTATTTTTGCTAAGTATTTCCGAAATCAAGATA CTGTATTATAGTTTGAATCTTACACGCTTCTCacgttgaaattctttttt ttcttgccAAAGTCAAATTTTGTAGCCTGAATATCAACTCTAAAAAACTA AGCAAAGAACTTTTGGAGGTTTTGCTCAGATCCATTTAATTTTCCCTTAC AAAAATGTTAAATACGAGCTTTCGGCTACGACAGAGCTGTTATTTTCAGA ATAATTCACAATAGCGTTGTcaaggggcgcaaaatttgtgtaggagagta tATTTTATGACACTGttattatctattcataatataaaaagataccgtca actgctctaacttgagacgattggtcgaaacatgggactgtattttcatt tactgtaaaatcgaaagagaaatcgtgtatttttaaatacgtcgttcatt aactcaaataaaatgactttggaggttcggtgaaatggtggtcgaattgc cgtcccatgtttcgtcagatagtcccaagttagtgCAGCTGACGGTAACT ACAAtggcataaaaatctgctctcttgcacaaattttgcgcccctcctgt ctaggCTACTGTGTACTTATTCATACTCAGAGATGTGTGTTTTTCAATGA TATTTTTACTTTGGATCTATGTTCCAGAGAGCACAGGCGTTGTCGATGTC TTCCACACCGTATCACACCGGACAGAATATTTATTCATTCTACTCAAAAA CGGACAAGTCATTGCGTGGACATTTCGCAGACCCGAATATGAATGGTATA AATTACAGACCGAATTTTGGTTATTCAAAAGTCGTGATTCGCAAATCATC TCATACGTCTACGACAATGAAACGCTACTGTGGTGTGAAAGGAGATCCAC GACTCAATTCTGTATTTGCAAAGTCAGCATCAATTTTAATGAAGATGCGG ACGTAACGTTCGAAGAGACAAGAGCTGTGTTACATAACTGTCTACCCATG AATATTTACTCATTATCACATGGACATTACACTTTCATTCCTGTATCTAA TAAAACgttgggtttgtttttattttggtctGCAAAGGATGGCCTAATCA CGGTaagttttctccattttttctctttgctaAAAGCTTGGAAGATCGAC ATAGAGCTGTCTTTTTCACAGAGGCTGGCTCTGTGTTCAATCTGTTTTCT AGTAATAGAATTTGATTGTAAATTGGTCGCATGGTGTTTTCAGCGTTATC TTAACAAAATCCAAACTAAAACCTAAGCCCAGTAATCAAGGATTTTCCTT TGGATTATTTTCATGACTTTGTATGCACTGCAAGTTGATGAAGCTTTACA CTCGCATAACGCTTATTATGGATCGGCCATCCAGTATATCAAAAAGCAAT AAGTGACCCCCGGGCTAAGAATGGACAAACACCTCACTTTTTAATAACGC AGATACTTCGAAAATACGGACACTTCCAAGATAAGGACGATTTTCCCATT CCTCAAGGAGATGATTAAGTTTGTTTTTCTATGATAAGAATTGTATAGAA GTCTTCATGTTTTGTTATTAAAGTAACCtaacttccgccattatggaagc aaacattTGATTTGCATGAGGGATcgcctctacagattcgaacgtttgct tccataatagCGGAAATTAGGAAACTTGACAAAACCTGAAAAACTTCTAT ATAGTTCTTTGTCAGGAAATTCACTTTTGCAACTATTGAAGTGATAAGTG TTTTGAAATTGTATTAGTTACCGACCGATTTAATGCCTCTTTTTAAAGAC GCCTTTGATACTTATGAAGAAGTGCGAgtatagactatgctatagtataa gacaaatcactatctaagaaataagcccaaagccgaagaaaattcgcaaa cgagcttttttgccgaaaagagtttacagccggtagagtttgccagtctt tcttcgaaactctaccgccgatttttttcccgtataccgccataacgcca taccgccatattttcccgcctttactatcattgTAACgaacgataacatc gtctagtgTGAGTATAATAAAGACTGACATTTCGTACTTGTTTGAGAAAA GCACTTGAGGAAAGAAACTTATAAGTATAATTGAAAGCTATACCTCGAAA GATATTTAAACTTTGAGAGTAGtttaaaaatttgaagatgaaaaaagttg aagattTCTTCTACGTGATCAAAATATCTTATTGTACAGTATTGTATACT TTTCTGACAGACACCTCGAatgatttcaaatatatataaaattgtcaaaa ataacCCATATAtcaatctgcttaaaattaTCTTCCCAACGagttattat ttttcattttctcctaGAGAGGAGTGTTTAGAAAAATACGGACTGCTGGT ATTTTCGGAACATACTCTAGCTTACCTAGCATCGAACTTTATTTCTTCTT TCGTTCACAAGGTTCGAATGTGGGGTGATGAATTCAATAACCATCATCAC ATCGCTACCACAAGTGATTATCAAACCATTGTACGCGATTGTCTCTACCT CTGGATCAACCGAACAAACTTCGAGAGTAAAATCTTATTACAAGCCACTC ATCCCACGTCCAAAGAACTTGTTGTGTTACAAAATGATTTGAATGTCTAT TCCATCTATGTTTCCAAGTATGGTGTTGAATGTTCTTTGTTGTGTACTCT TGAAGAACCTTCAGAGGGGAAAGATAATTTTGCAAAACAAATCTCCAAAT TCTATCCACTCCAACGAATGTTACTACTTTTAATGTCAGACGGCACGGTC AATATTTACGAAAACCAAGGTGGTTTGTTTCTATGGAAAACACAAACTTT CAGGTCTGGTGCTCCTTTGATTTGGATACGGAAAGGAAACTATCCGGCAG CTGGCGTTTGGAATCGGTCCGGAATTTGGAATATCCGTCCCAAACCGATC GTTGAGCAGTTGAAAGAGATCTTAGCCAAGCAACACCAAGTGTTAAATGA GGATGTACCGGATAACAAGTCTATGGTGGATTCCGGTAAAGTCACGGATC CGGACTTTGCGCTCGATGTGTTTGATTCGGAACACAAGAGGGTGAATAAC AGATCCAGGAAATTGCGAATTAAACAGGGTGTTTCTCGGAGTGAAGATTT TCCAATGCGATCGCTTTTCAACATCCTTCATATGTGGCAGCTCCGGAATT TCTCTGCTGAAACAGCTATCTCACTTGCAACACGTCTCAAAGAGTTACAT GAAAATGAGGACGAGGTCATAGATCTTtctgaaatcttttatctggTCGA TGTGATCAAAGATCCTGTTTTACTGNATCTTTCTGAAATCTTTTATTTGA TCGATGTGATCAAAGATCCTGTGTTGCTATTAGCTGTTTTTGGAAACAAA TCATTCCCGTATAGTATCAAAAAGAAGTTAACAGAGCGCATTCGGACATT ACTCCAACACTCAAGCACGAAGAAACTAGATAAGCGTATTTTGACATTGC TGACACAGTACGTGTCAACTGAAGACAAAATTAAAGCCTTTTTCACCGAT AGTAAGCCAAACATCACCACAACCAAGATGGTTCACCAGAAGAAGCCAAT CAACATGACAGAGGAGTTGAAGTCCTTGGAAAGTTTGTTGACATCACCAC AGTATCATTGCCGTGTATTGGATAAACATTTGTGTTTGGTCATGGATTTG GATGCAAATGGTTTTGTGGAGTTTGTATTGAATCTGATGATGACTGGTGA CGTTGGAGATGAGAATAACGAGCGGTTGACATTGGAGATCTGGAAAACCT TTGTCAGGTAAGATGTTTATTTATAAGGGGTGTTTACTTTACCCTTGGCT GATTGGCATCAACTAACGGATCCGTGCTCCTTATACCACCTGTGCTTTTA TCCTCAATTTAGACTAATTTCACCCTGGAAAGATAGTCTTCTAAAAGATT CTACTACTAATAACTAAGATATCGAATTACAGAGACACGAATTATAGAGA CTAttgactaatttgtatttattttttcgttGGTAGTGACCAATGTAGGC TTGCACGCCGTATCATTTCACATCTTTGGCAACACAATCCTGGCAAAATT GTCATTCTCTTAAAGAGCTTAGAAACATTTGTGGAAGAGAATAGAGAAAA ACTGTTTCCAATTGTCTTCAAGGTAAACCATAACTTCTTCGGTGTGCTTA GTAAATTTCAATCGCCATAAATGGATAGACAACGAATATACAGTCCATGT AATATTCTTTAGCTCTTGAATTAATATAAATTCAATATTGGCATNTACAG TCCATGTAATATTCTTTAGCTCTTGAATTAATATAAATTCAATATTGGTA GCAATCCTTTCATTTAttagttccatttatactgagacggaaaaatcgtc tgagacgagtagtttgtaaaatgtgatctgtggaggagatcctatttatt gatacatgaatggaaagtacactcctccataatgctcattttctaaattg ctcgtctcagacaaattaatcgtcTCTGTATAAATAGAACTATTTACTCG TTTCTTCATTCATTCATGCATAAATTCATTTTCCATAGATGGAGAAATTC ATTCGACGTCTTTGGAACACCTTCACCCTAACTGAAGATGAAAACAAGAG TGTTAACCAGGAAATGAGGATGCAAGTGTTTTGCCAACTCGTTCAAAAGT TACCATCAGAAGAAGCTTTTGATGTATATCTACAGCATGATATAGTTGAG CAGGCTTTCCACCTATTGCAGAACAAGTGTTCAGATTCACAAAGCAATGA AGACCCTATTCAACATACATCCATGTTTTTCCAAATGCTCGCTTACTTAC TAGGAAAAAAGCTGCTCGGTTGCTATGCTACTCGATTAAGTACGCTATTA CCTGACACCTTCAAAATGGCGGAGTTTTGGAACATGTATCAACAACAGGC TGGTTTTGAAGCATCCTCGCGGTGCGGAATTTTTGTGAAACACGAAAAGG ATTTGTGTGTTGGTGACATGAAGTCgctctttgaaaaattattggaaGAT TGATTCCTTCCGCCTTCTTTTTATGTCGGATTAATTTTGGTGACGTTGTT TCGCGAAGTTGTGTCATGAAATTCATTATATCACATTACCCATCATATTC ATGatatatgcaccactggagagtcttccgggaacttttaaacttttcca CCAAATACGTCacgtaaacaataaaaaaagtgacgtattgggtggaacaa aaacaaaaaagtttcataatttcgtgaagttattgcagtggtgcatatca tgaattaggtTGCTGATTTGCGAAATAAAAACTAAATGAGATTTTCGGCC TAAAACcccaatttctatttttgaaaattccttttttcaGGGATATTTAT TTGTAGCTGATTTTAGGCTCTTTGTCGATATTCCCGCGGGCAAATCTCTT CCTTGCTTACAACGCTCCAAAACTCCAATGACCCGGAGGGAGTTAGGTAT ATTTTAAAGAAGTCTTTCTGAGTATTCTAATTtaaatgtaaatttttgaa aataattgtgTTAATATAATTCGATAATTTATGTAAAATATGAGATTTTT ATAGACCATTTTGATATCATTTTTGTTGcaaacatttattttataaagtc ttttttttgtttttcacaaatttcttATAGATTAATAAAGGGGAGAATAT TTTGATACATTATATGTTATGAAGTGAATAGACTTGCTCAAGTGCTTGGA GCAACCATtatcacacccccttctcatagatCCGGCAGAATTTTTTCATC CAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057516TCONS_00057516Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057516-proteinTCONS_00057516-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:175784..182686 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.26 13.96 5.19 3.26 9.95 8.19 7.07 7.36 4.31 7.03 4.91 3.59 3.13 2.84 4.45 4.74 6.67 6.48 2.61 3.26 3.78 4.26 16.05 14.49 5.46 6.25 4.1 2.98 13.26 12.98