XLOC_036418 (gene) - C. hemisphaerica

Overview
NameXLOC_036418
Unique NameXLOC_036418
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_298:293055..301860-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036418 ID=XLOC_036418|Name=XLOC_036418|organism=Clytia hemisphaerica|type=gene|length=8806bp|location=Sequence derived from alignment at scaffold_298:293055..301860- (Clytia hemisphaerica)
TTTTTACGTTGGCTGAGAAGTGCCCGTAAAGTTTCGGAGAAACAAAACAG CGGAACAACACCCTTTATTCCGGTATAGTTGTTGTCAGCGTGTCGTCAGC ATAAATAAACAAAATTCCACTTTCGATTTAGAATTTTTTAAAGATGGCGG CTGAAAAGAGATGATCTGAGATGCTCTTTTTACTGCAATGATGCATTGGC AATTTAAAGTTAAAGAAACAGGTGAGTTTATTTTCCTCAAAGACACTATA GCACTCAATATCGAAAGGCAGTCCTTTTCTTTATCTCTAAGTCACACCGA CCCGGCCAAACAACTACCAGTCCAGTCGTCGTCAGTCAGTCATCAGTACA GTCAACTGCAGTTAATTAAGAACATTTGGCGAGTTCCCGTACGCGGCCGC AATCAAAAAAATCATAACATCACTCATTAAAAAGTGGCTTTCGTGTCCTT TCGCACTCTTTTTAGCCTAGACAATGTAGCAAAAATAGTAAGTATAAGCG CACTGTGCTTTTAATTGGCTGGATTTTTTTTTTGCGCCGAACTTTCAGCG ATGATTGTCCAAACTGTTACAATGAAATATATCCAGCACATTTTTTATCT TCTTACCTTCTTCATTTTCAATGAAGCACTCAAAGTTTACTGAAGGTAAG CACATAAGATATTCTTATAATTAATGATATTCATTGAAACACGCTTGTCG TGCGCTGCGGTGGAGTGCATGACGTAACTCGCGCGGCAACTAACTCGCCT TCTGTTGGAAGATCATATTGGGCGTTTTGGCATTACCACCCTCGAAGCAA CGGGCGCCTTTGTCTTTCCGCAAATCTTTCCACCATTTTAGATGGCCTTA ACAATAGATCTAAAAGGGCGCCATAATCTTGGAAGATAATTTGTTTTGGT CTCCGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCGA TGGAAAATAGTAAGAAACTTAAGTTTACAAGTGTCATTTAGTTTTTGCTG GCTTATAGAATGGCAGGATCCTGGATGGTTTCCCTAACTGAACTGCTCTA ACTTCGGGACGGTTGGTCGAAACATGGGACTGTTGCATATCTGGTCTGTA TTTCCACTTACTGTGAATGGAAAGAGAAATCATGTATTTTTTAGTACGTT GTTCATTAACTCAAATCATATGACTTTTATTTTATTTGGAGGTTCGGTGA AATGGTGGCCGAGTTGCCGTCCCATGATGCATGTTTTGTCAGATAGTCCC AAGTTAGAGCAGTTGACGGTATTTTTTTTTAGTCACCCTCGTCTACACTA CGGCAAGTTGGTCTAATGTCGACATCCATCTTCTAGTTTCGACATCCTTC TTTATAGATAGGAATAATAAGAAGGTCAAACTCACTGATAGACTAAAGAT TTTTCCTCTCATCGCGCTAGTCAAAGTCAATCAGGGATTCCGACCTTCCT CAGTTTCTATTGTTCCTATCTCTAAAGAAGGGTATCGAAATTAGAAGACG GATGTCGACATTAGACCAACTTACCACGTGCGTTTGGTTTGGGAACCCAG TGTGGAATCCATGCAAAAGCCACGCCGAAGATATTTTTACTGTGCATGAA TTCCAGACTGGTTGGGAACGCGAAACACGAACGCAAACTACCCATGTCTA AACTTTTCAATATATCTCCAGAACTAACAGATTTTTTGAAATTCTGTAAT AAGGTCTAAGTTCCTGAATAGTTTTACTACCGGGTGCACCAAAAAAAAGT ATACAACTTTGTCGAGATATTGTGAGCATCAGGATTTAAATTTTTTGTTC ATTCTTTTTTTATTGTATAGAGGATGCTGTAACTTGAATTTTGAGCTATC ATACATTAAATTTGAAAAAGTATTTCGAAAGTTATTCCCAAAAAACAAAC TTTTTTTCCATGTCGAAATTTCAACAAATCATTAAAAACAGCAAGCAAAC TTTTCTCTTGACCCTTACCTTCTTTACACATAAAAATACCAAAAAAATGC AACTGTGTTCATCAAAACTCGTTGCGGAATTTAAGAATATGGTAAACAAG CTATTCCCACGTGGGATAATATTTTTGGAAAGGCTGAAAAAAAATTTTGG AAATCTCAAAGAGAGGTTTTGATGTTATGTGTGTGCTATGTTAGAAAGTT TTTGAAAAAAATAGATCACCATTCCTCGACTAGTTTCTCAAAGAACTTGG GTCTGCATTGAGTTTGCTGGTGTTGGAAATGTTCATGACGTGCAAATAAG ATGGACAAACTGTTGGCAAAATATAAGATAAGAGAAAAAGGAATTAAAAA AACGATGAAACTGTGTTTTTGTCATTTTGTCTTATTTATAGCGTGATTAC TGTTTTTAATGATTTTTTGAAATTTCGACATGGAAAAAAAGTCAGTTTTT TGGAAATAACTTTCGAACTACTTTTTCAAACTTAATGTATGATAGCTCAA AATTCAAGTTAGAGCATCCTCTATACAATAAAAAAAGAATGAACAAAAAA TTTAAATCTTGAAGCTCACAATGTCTTGACAAACCTGTATACTTTTTTTT GGTGCACCCGGTATGTTCTATGGAAAAATCATAAGCATCAGTCAAATACT CGTTCATCTATTTAAGATTGAAGACAAAAATTTGCGAAGAAAAATAAACC TTGAGCACAAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTC GCCGCCATCTTGAATTTAAAATGAGAATTCTAGAGAATTCCATTCGTTTC CAGCTCCCGCGGTCTTTTTTCATCCAATCAGATCGTGCGATTTCACTTTC GCTTTTTCTAGTCCAATAAGACTGCGGGATTTGAGTCATGTGACTTATCT ATTAAAAAACCCGCGCGAAATACAGGGGGTCACAAATAGAAATACAGGGG GTCACACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNAATTAAGGCCAATATGTTTGGTTT TTCTGAAGGACAAAAGGTATAGGAAGCTTTACTGAAAGAGGGATAAGGCT GGGACAATCTATTTAAAAGATATGGACGTAAAAAAGGCACTTTTTTGGGT GATAATTAAGATTTTACTTAGAAACTTCAATTCTCTTACCCCCGTCTCGG CCCCCCCTGATATGAGCAAGGGAACCATGATGGCCACCCCTACTGAAAAT TTCAGATCAAAACAAACAAGGAATTAATTCCTGTAACTCGAAGAAAATTG GAAAAAACTGGTTTTTGACTGTTTCCGATCCTAAAGTGCTATTTTTTGGT AAAAGCTGTACAATTTATGTTTGGATTTCTAGAAAGCTTACCCATTCATT GTTAATACATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAAAAGATA TAGTCAAATCTTGTAGGGTCATTTTTCAAATTTTTTTTGCCACATTCGAT TTTCGCATTTCGCCATTTTACCCTACGCAAACGCACGTGTACGGTACTAC AGCTACAGGCGTGATGATGTATTTGCAATCAACAACAAGGATGGAGGTTA CCTCAATCAAGTTTCCAAGTGCCAAATTTAAAAAGGAAGGAGTTTACCAT CTTGATTTTGGAAAAACCTACACAAGTTTTACTCTACTCAAGCAGACTCA AGCTCTTTCAAGCTAAAAATTTTAAAGTTTTACTTCTTTTTGTCAGAAAG TAAACTGCAAAATATTGCAATCAATTTTCATTTGAGATTGGGTATATAAC TTCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAAAGACCTGGCAG TTAGGGAAACCATCCAGGATCCTGCCATTCTATAAGCCAGCAAAAACTAA ATGACACTTGTAAACTTAAGTTTCTTACCATTTTCCATCNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCCAAGATTATGGCGC CCTTTTGGATCTATTGTTAAGGCCATTTAAAATGGTGGAAAGAGTTGCGG AAAGACAAAGGCGCTCGCTGCGTCGAGGGTGGTAACGCCAAAACGCCCAA TATGATCTTCCAACAGAAGGTGAGTTAGTCGCGCGCGAATTACGTCATGC ACTCCACCGCAGCGCATAACGAAGCGTGTTTAAATGAATATCATTAATTA TAAGAATATCTTATGTGCTTACTTTCAGTAAACTTCGAGTGTTTCATTAA AGATGAAGAAGGTAAGAAGATAAAAAATGCGCTGGATAATTTTCATTGTA ACAGTTTGATCAATCATCGCTGAAAGTTTGAAAAAGTTTTTTTCCGACGC AAAAGAAATTGTCAGCCAATTAAAAGCACAGTGTGCTTATACTTACTATG TTTGCTACATCGTCTAGGCAAAAAAAGTGCAAAAAGACACGAACGCCATT TTTTTATTGAGTGACGTTATGATTTTTTTGATTGCGGCCGCGTACAGGAA CTCGCCAAATGCCTGGCTGGTCATTAAAATACAATGTTAAATCAAAACAA AAATGGTAGAGTAGAGCTGCGAGCGGAGCTGCGTAGTTGTATTTTAATGA CCAGACAGGTCATTCATTTGAAGGCTATGCATGTTAACCTCCACTGATGC AAGTTACCCTATCTCACGGTAAGTGACTTATATACTTCCTTTTGTCAGAA AATAAAATGAAATTTTAGTCCAAAAAGAATTGATAAAAAGAAGTCTTTTA CTAGAAATTAACTACTGGAAAACACAAGCTGGACTCTTAGGAGTTGATNA ATTGATAAAAAGAAGTCTTTTACTAGAAATTAACTACTGGAAAACACAAG CTGGACTCTTAGGAGTTGATTTTTGCAAAAATATGAATTTTCAAAAATTG ATGGTTACTTCCTTTTGTCAGATTACGGCAGATATATTGTAGACCGAACC CGTGTGACGTAATTTTCACCCACAATCAGCAATTTTTCTAAGAAATGAAG AAAGAGAGAATAACAGAACAATATAGTACACCTTGCTTAGCCTAAGTCTT TTTAGAGTTCCCTTTTTACTTATTTTGTAATTTGTATGTGGGTAAGAATT ATTCAGCTAGGCAGCTTCCTTGAGATTTGGTCAAAGATAGTGCCTAACTG GATTTTGCAGGCACTCTTCAATGGCTGCATGCATGAGCGAGGTTCCATGA AAAGAGAATTTTGTTGAAGTCAGCATTTTCAACAAACACTTCAAATTCAA ATTGCTTCCTATAGCAATAACTATTTTGTGAAAGTTTGAAGTGAAAAGCC TTAAAATTGTTTAATTTTTAGAGCAAGTTGGACACTGTCAATGCCCCATC TCATTTCTTTATAACGCTTCGAAAAAACCTATAAAAACATTTACTTAAAA GGGGAACCTAATGCGGCCATTGCGACTGCCTTAGATACCCCCAGTAAAGA CCAATTTGGAAAAACCCAGTTAGGGTGCAAACTGCCTGTTCCTGACTGAC ATAAAACATAAACATAAAACTATGTGCAGGTTCAAACGGGAAATATTTGA AAAATTAGAAGATATTTGAGCTATCAAGGTATTACTAAATTATCCTGCCA TTACAACAAGTTTTATTTTTCTAATACTAAAAGGGGAAATATTTGAGTGA GAACAGAAGGTTTCCCTCTAAAATCTATCNAAAATGCTTGATGATGGGCA AAAATGACGTCAAACAGAATAGGTTTTACCATTACAAGAAGTTTTATTTT TCTAATACTAAAAGGGGAAATATTTGAGTGAGAACAGAAGGTTTCCCCCT AAAATCTATCAGTATAAACAAAGGAGACGCAAAATATCAGAAGCAGTGTG TTGTTCAATGAGCAGCGGGGCAAGTTTGTGGAAGTTTTTAGTGTTATTAT TATTTTCTAAGGAGGGACGACTTTTAACAAACCGCAAATTTACTGTTCTT TCAATTTAGAAACATTTTGAAAGAGTTTTAGATGGAAAAGATCGCTGAAA ATGGCGGTATGTATTTCAAAAAAAAATTATTTATGATATCTATATGGTAT AATTAGTCATCTGATCAGACCCTTGGCAGGTTATTCACTATTCAGAGGAA AAAGAAGAATTTTAATAAAAAAGACAAAAAATTTTTTTTATCCTTCATGT GTCATTTTTTTTTCATGAATTATATTCATTTCCCTCTCAAATCATCTTTC CAACGGTATAAAGCTACTTCAAATTAATTTGATTGTTATTATGTGTTCAA GAAGAATCATTGAAATTGTATTCAAAACAAAATGAGTTGAATTCAGTTTT GATCTTGCTCTTATAATAGGCTAAAGAACGTGATGACATATTAGATGACG AGAAGTTCCAAGCCAGGAACTGGAAACAATACACAGAAAGACAGCTACAG AAACTTCACCCTGTTCAAAGAAGCAGATATTTAGCTGTGAGTATTATTTG AACTTATTTAGACGACTTACCAGCCACCTCGCTTTTGTTTGATATGAGGG TCAGAAATAAGAGTCCGTTGTTTTGATGTTCCAGAAAATATTGTAAATTA ACCTCATTGCATTAACTTATATCTAAGTACTGATTTAGTGTGATGCTTGT ACAACATGAAACTTCAAGTACTGTGTTTTTACTGAGAATTTACATTAGCT ACTTTTCAACCATAATAGTTGAATTGGAGAACGCGACGGTCTTTTGAATA ACTAATTACTCCACAACAGTTACCTAGAGACAAGATAATTATCACGTTTT TATTGGCTGAGGAAAAGTAAGGTATGTGGAGTAATTTGTTACTCGATAGG CCGTCATGTTTCCCAAAAGAACTATTGTCTTTCTTGAAAATTTTCTTTCT ATTACTATACTGGGAATTACGTTTCAGTCTTTTCGTTGTTCTTTCAGTCT GCGCCACAATTGGTTTTATGGCGTGAGATGCTAGGCAATTCGATCTGCCT AGCCAGGGTGCAGTATGCAGTGCTGACGAGTCCTAATAAGGACGAAATGC ATATGCTGCTCTGCCACCCAAATCTCCTGAAAGAAGATAGTTGGACAGAA ATTCTTTGAATTTCTTCACATATATATGGTGAAGATCAGAGATCTGACCT CAAGAGAGCAAGTGTTGAAAATACTAAATAAAAAAAAATGAAACATAAAA AGGGACTAATATTATTCCAAGAAGTGGACAAAGGGAAATTCCCTAGGGAA TTCTGTGAATGACTCCTCTAGAGTCAAGCTTTGGAGATATATATATATCG GTTTTCGCCGGTAGTGACAAATTTGAGAAATTCGAGCTAGAGAAATTTTT TTGAAATTTACCACTATTGGAAAACACCAAGGTGTTTTCGATATGAATAT CGTAATTGACGAATCAAAGACTCAACAGAAAAAACCCATTCTATTCTTTT TAGACAGCAGAAATCAACCATTTGATTTATACACAACAAACAGCCATTAA GGCGGTTCGTCTTCAAAGTCTTTTACCGCCCATTCCCACTAGGATCAAGT TCAAAGACTCGCTGGTCAAGGAACAGGTAAGGAAATTGTCTTATTCTTTT GTTCACAAAGCTTGAGTAAAGATTTGCTTTATCATACCTGAACATACTAC CCCCGTTTTTAGTAAGAAGTTGGAGATTTGATGTTTCACAGAAAAGTGCT ACCAAAGGTATTTCGGGTTCCATATCTTCCGAAGGACTTTTCCTTTTGCC TTGAAATTTGACCTTCTTTACCTAAGGTTGAACTACCACTGGTGTAAAAA TAAATGTTATTAGCATAAATAGAAATTAAAGCTCAATTTTTTTAATCGCA AATTTGACCGCTAAAAATCGCGAATTTCTCAATCAAAAATACATTCAAAC ATAGCGCTTTTGACCCTCTTAAACAAGCAAAAAAAATTCCCACATCTCCA CAATTATATTTCAATATCAAAAGTTACAACCATTCTTGTTTCCACTGCCA ATTATATCTGGATACACTTTTATATTTGTATAGAGTTATTAGTTATTTTG ATTTTACTTTCTCATGTTTTAGCGCATGCGTGTTGAAGTGTTAATGGAGG ACGATTTGGGGCTACAAACAACTCGAAAGTTATGCTGACTCAGCACTCTG TCAGTATATGTATATTATGTAAATATAGTATCATTTTGTAACTGATAATC GTATAAATTAATGAAAATATAATAATAATCTGAAACATAATTCAAATTAA AATCCACTGTTCTTTTCCTATTCTACAGGGTGTCCGGAAGAAAGTATCGA GTCACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057785TCONS_00057785Clytia hemisphaericatranscript
TCONS_00057784TCONS_00057784Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057785-proteinTCONS_00057785-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_298supercontigscaffold_298:293055..301860 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.94 71.76 52.32 52.58 66.3 51.24 47.41 47.96 41.89 34.24 35.17 43.66 18.55 21.23 12.96 12.09 20.07 25.13 10.23 12.56 19.94 17.62 25.17 20.6 144.9 113.37 9.76 11.31 10.45 9.36