XLOC_036454 (gene) - C. hemisphaerica

Overview
NameXLOC_036454
Unique NameXLOC_036454
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_299:112315..119689+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036454 ID=XLOC_036454|Name=XLOC_036454|organism=Clytia hemisphaerica|type=gene|length=7375bp|location=Sequence derived from alignment at scaffold_299:112315..119689+ (Clytia hemisphaerica)
TACTGAGTGCAAAGTTTACGCATCAAGCGCCTCCAATATGGTATAAATAC
AACAAAGTTTCTATGATAGAAGCACACTACTTTCAAGAAGAGAAAGCCAA
GTCAAAACGAAGAAAACAAGATGatgaagtttttcattttcactttacTG
GCAGCTTATGTTGTCTGCCAAAGTCCCGAAGAAGGTAAGAAATCAAAAGC
CAGTTAAGGCACCTGCGTAATCCCTATAATTTCGAACAACATTGAatctt
aaattattttttaggttCATGATTTTCGAAGATTACATTTGGCTGGACAT
TTAGTAACGATTGCAAAAAGAGCTGGaaaatagcaaattttattAAACTA
CCGGTCATACGATAGTCGATAAAAACGTTAAGAAATCTGAACAATATCCG
AAGAAACGGCAATTTTTAAGATCTTGACGagtctgaaaaatgaaataaga
acaaataaggaaaaatagaaaaataccaTAATCTTTACAAAATCTGTACG
GCTAAGCCACGGTTATTCAGACTAAAATATCATTCATACAACTGCAATCA
GATCAATATGCTACTTTTTTAAACTTATCTTTCTTAGGTGACATGGTTGA
GGGAGACATTGAACTTGACCCTGACCAAATGGCCGCTTATATGGAACAAA
TGGAAAAAGCTGGAAACTCTTTTGCTGCCATCAAATCAAACTTATGGAAG
ACCAACGGAAGAGCTGACAACATCAAATACTACATTGATTCTCAAATCAG
TAAGTCAGATAAGTATTATGGAATATCCTTATTGAATTAAATTGgcccag
aaaaaaaccgtatacttcctgttgaggaggtccatccctctgtggctTGA
AATATTGTAACCCCCAGGAATTCTGgtcaatttcaggtttaaagccctct
ggaattctgtattttagtaggatttaaaagctgccccattgaattccagg
tatttttgacagatttttgtatctccctatggaattccgccacatatcaa
accttgaCCCCTtagaacggaaatggacctcctcgaCAGGGGGATacggt
tttttctggaaagGCCCAATTATGGTCCATATTTTAACAGCCTCGTAACC
AAGTTGCAGTAATCTTGGCAAACTGCATTCTGGTAAAGGTTTTTATATGA
ACTTCTTTTAACAACGATTACATTTTTAATAAGCAAGTGTTTCATATCAG
Gctagcattatgcttagcattttatattgtttttaaacgataaagccatt
gtttaggtaccaagaattaagcctgcatatgcttataaacgttcaGTTTA
TAGAAAGAAAAACACGTATTCATTAATTGTTTTCTAAACTTAAGGTGGAG
CAAGCAGTGCTATCAGCCAAGCTATTGCTGATTACCAAAAATACACTTGC
ATCAGATTCTCCAGACAATCAAGAAGACCAAGTGGACCTCATCTCTTCTT
CACCACTGGATCAGGGTAAGACTTTTTATAAACTATATCCATAATCTACA
GaatgacacccccttctcacaggtccggtgggattttatcagtaAATGGG
GGTACAAATAACGTACcaaaacttgatggggattgatattcccaagtTTT
TTATAGCTGGGGACttgaattcctttgttttctagccagaaaattcagtg
gggatggaaaaaatagcacaatattttgcagtgaggatttggttatctgg
ttattttcagcggggatgAAACTTAGAGTATAATTCTCCACTGGGgacca
tatttttgccaaattttccagtgggaagggttgtcagtgggtctgtgaga
aggggtgtagtATGTAAATTCACCTGAGTGTTGAATAAGAAAgggttgaa
agaaaaatttaaatccacTTTAAATAGAGAAGAGTAAAACAGATCACTCT
AATTTAATTTTACCTACAACTTTTGATAATCAACACCCTGAGTAAAGTAT
catatttttgacataatttatTTGAACAACGCCCTGGTTAGGGTTGAACG
AGTAACCATATccacaaaaagaatttttttggttAGTTACGAATTTTTTC
CCGACAATGTATCTTAGAAATcttcaaagattcttttttatttaaaacac
CTCATAGTTGCTCTTCACCAGTTGGTCGAATGAGCAGAGGAAACAGCATC
CGTCTTGCAAGAGGATGTTGGCGTAAAGGAACAATCATTCACGAAATTGG
ACATTCAATCGGTCTGTTCCACGAACAATCAAGGTACAAACCCTTTGTTT
TCAAACGATACAGTGGAGTATCTTCATTTCGAACCTTTATAacttgaatg
tctccttaactcgaacaagttttatcgTCCTTTCGGTTAACTCTAACCTC
ACCCCttaacaaatttgtgttccacGTGCGTGATAGAGTTATGAAAACGC
CACTGTAACAGAGTTTATGTCCTTTGCTTATTCTAAAAACTTCAGCTGAT
CTTGCTGCATTTTGTTACGAATTCTGATCAGGACTTTCTAGCGGCTTTAC
ATTGTACAGTTTCTTCAACTCGAACCTTTATAACTCGCATGTCTCAACTC
ANCTTTCTAGCGGCTTTACATTGTACAGTTTCTTCAACTCGAACCTTTAT
AACTCGCATGTCTCAACTCAAAcaaagttttctcgtcccttcggttaaca
atgccttataaacatttaaagaagaaattttgtgcTGTTCGATTAATGAA
GACTGTAATACATTTTGGTTATCTTTAATGAATTAAGACGCTGTCACTTG
TTCTTCTTCTGGAACGCTTTCTCGGTATGTAAATTACCATTTTATTGACG
AGTCTCCTTAAATCTTTTTAGACCTGACCGTGATAATTTTGTTACAATCA
GATGGGAAAACATTAAAGAACGTAAGTTTactattttttgtttcttgttt
acTTTGGTTAGAATTAATTTcactaaaaagttaaaaaatcagCAGAAAAT
AAGGATTGGGTAAAAGTTcggtagcctggatatccagactgtTCCTTAAT
Taattcacagtctagtttattatatttttgtccaccgttacggtctggtt
tacctagctTGCCTGCATCCAAATCTGAGGATGAAATAGTGATTGGTCAG
TACGAACATTGAACGTGATGTGAATGAGCCCATCCCgccttttaaagatt
tttgcaGGTTTTTTTGATACGCCAAATCGCttcaatgaaaaataataatt
tcccCCTACCGCCCTCAAGGTAAAACCCTCAAAGAAGTGCCCTCAATTAA
ttcttgttatatttttttactaACTTTGTATAGAAAACAAACACAACTTC
AACAAAATGAGAGCTTCCAACTGGAACAAACATGACACCAATTATGATTA
CGACAGGTGACTATTATCTTACTGACTACTATAGGCGAGGTCAAATGAGT
TGTTGTTTTTATCAGTAAATAGCGTTAGACTAATAGCCTTCACCAGCCAA
CCGtgtgattttttattgaaagtgaaatctgtaaaatatttttcttctca
aCTGATAATATTTAAAGGCCATCCAAATATGCCATTTTTCAAATGCAaag
gttaaattttcaaaaaaaaagggaaaaaaaaaggaaaattgaagaaaaaa
gcGTGGCAGATGAGTTTTGTTCGCCATTAAATATTTAATCCAACACACTT
GCAGCGAGATAAAAACCTTAACATTCCGAAGGTTACAACGTTTTTagttt
ttcatccaacatttcattCAACACTGGATAATAAAATGTTTGATGAAATA
TTGGACTGGTTTGCCCTGGCTTTAATGTTTACATTCCCTGTTTCATCATA
GTATCATGCATTACGGATCCAGATACTTTACAAAGAACGGCGGATTAACC
ATTCAGACAAAGAACTCTGCGGATCAAACTCGAATTGGAAAGCGATCTGG
ATTTTCGGAAACAGACAAAATCCAAATCAACAGAATGTACTGCCAAGGTT
AGTGATTATTTTTATtcctaagtaagtaagtctacgACCGCANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtttatttcttaaaatacagtaAGCCGAATGAGCCCATCCTGCCTTAT
AAAGATTTTTGCAGGTTTTTTGATACGCCAAATCGCTTcaatgaaaagta
ataatttccCCCTACCGCCCTCAAGGTAAAACCCTCAAACAAGTGCCCTC
AATTAAttcttgttatatttttttactaACTTTGTATAGAAAACAAACAC
AACTTCAACAAAATGAGAGCTTCCAACTGGAACAAACATGACACCAATTA
TGATTACGACAGGTGACTATTATCTTACTGACTACTATAGGCGAGGTCAA
ATGAGTTGTTGTTTTTATCAGTAAATAGCGTTAGACTAATAGCCTTCACC
AGCCAACCGtgtgattttttattgaaagtgaaatctgtaaaatatttttc
ttctcaaCTGATAATATTTAAAGGCCATCCAAATATGCCATTTTTCAAAT
GCAaaggttaaattttcaaaaaaaaagggaaaaaaaaaggaaaattgaag
aaaaaagcGTGGCAGATGAGTTTTGTTCGCCATTAAATATTTAATCCAAC
ACACTTGCAGCGAGATAAAAACCTTAACATTCCGAAGGTTACAACGTTTT
TagtttttcatccaacatttcattCAACACTGGATAATAAAATGTTTGAT
GAAATATTGGACTGGTTTGCCCTGGCTTTAATGTTTACATTCCCTGTTTC
ATCATAGTATCATGCATTACGGATCCAGATACTTTACAAAGAACGGCGGA
TTAACCATTCAGACAAAGAACTCTGCGGATCAAACTCGAATTGGAAAGCG
ATCTGGATTTTCGGAAACAGACAAAATCCAAATCAACAGAATGTACTGCC
AAGGTTAGTGATTATTTTTATtcctaagtaagtaagtctacgACCGCACA
CGGAGGccacccgaaggctcctctttcgatagctatctacccgaaggtag
gggagggctccactctttctccctggattgctccacttacccttgacttt
tctcttaattactgagcatcaagcagaaagGCATGAAGTACCATTTTAAG
AATCTTTGGTATAACCCGGCTGGATGTTGAACCTACAACCTTGctaaccg
tagccggatgctctaccactgcactacggtcatTTTATTCCTCAAGTGTT
TGTTAACCCCCAACCGTGGTACAAAGACTTTGCGCACTCACGCGTCCGTT
TTTTATGATGTTGTTCTTTTTAAGTTTTCAGTAACAAGTAGAAAGGCTTT
TGCAGCGTTGTGATTGCCAATTTGTTAAAAGTTTCATCTCTATCTGTTGG
CCGAGCAGActatacccctgtgtcacagacacgCTGGGACCCCGGCCCCA
Caggaaagattgacaaaaatttcgtccccggtggggagataccttagaat
ttcagccccacttggaaattaacttttaattcatcccctttcgaaattca
atgtttaaaaactgcAATTCGAAACCATTGCCACTGAGTTTTTAAACGTC
GGGAATTTCTAtctccattgggatttcaatagagatttttatccccacag
agaaaaaagttccaccggggctgtgagacaggggtgttagacTATACACC
TAGCTATTTCATAAGGTTGTTCTAACGTTTATAACAttgacgttgtgaac
attagataaacattgaaacaacaTTATGTGTCAATTCGAACtctttattc
tttcaaaggatCAACATGTGCTGACAAAGATTCCCGATGCAGTGGTTGGA
CATCCTATTGTCGTACCAACAATTTTGTCAAAACAAATTGCAAGAAAACA
TGTTCGTTATGCTAATTTATATACAAGATTGAACTAGAATAAAGATAGTT
ATAATATCAAGATAATGCTTTTTTTACTGTTGATCCCATTTAAATGCAAT
ATTAGGGGTGAAAGAAAGAGCCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057827TCONS_00057827Clytia hemisphaericatranscript
TCONS_00057828TCONS_00057828Clytia hemisphaericatranscript
TCONS_00057829TCONS_00057829Clytia hemisphaericatranscript
TCONS_00057830TCONS_00057830Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057830-proteinTCONS_00057830-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_299supercontigscaffold_299:112315..119689 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.96	1.39	0.99	0.42	0.06	0.35	1.45	1.2	0.84	0.64	2.4	0.79	684.76	652.89	1.04	1.73	570.7	754.7	4260.04	3967.81	3449.19	3385.25	1105.9	1387.57	1497.84	1630.89	1.26	1.73	0.14	0.32