XLOC_036521 (gene) - C. hemisphaerica

Overview
NameXLOC_036521
Unique NameXLOC_036521
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:103459..107774+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036521 ID=XLOC_036521|Name=XLOC_036521|organism=Clytia hemisphaerica|type=gene|length=4316bp|location=Sequence derived from alignment at scaffold_302:103459..107774+ (Clytia hemisphaerica)
ATGCATTCCGGATGGGTTAGAACTGCTGTCCCTGGCTTCAAAGTCACAAT
GCTCAGGGgtgaattttgaatatttatttcgttttctggaaaaacccagT
AATTCATAGCTATAATTTAATTAGTTAAGGATGTGTTACAAGTTTTTTAC
TCAAACTTTTATTCAAAGACTTGGATTAGGAGATATAGTATATAATCTAC
AGACAACTTTTCACATACTGTGAAAAAAACCCATAACTTTCTGGATCTGT
AGACTAAAATTGAGGAATTTATGTTCAGTTATTTATATAGTACTGTCATG
TTTTTTTCTCTGCATGTGAATTCGGTTCGGTTGAATTTGGGACTTGTTTT
CTATCATGTTTTCAAGGACATTGCTAATTTCAAATACCTAATATTTAGAT
TATTTATAAGATAACAATCATTATGCAAGTTTTTGACTTTGAtgacaaaa
atcttttgatatGTGCATTGGTTACGATTGGAATGCAACTTACCTTCTTC
ATCGTTGCAGCAACGTTCAAATTTGATAAAGTCACTGACTTTGCTGGTGG
CTCAAATTTCTTAGTCGTTGCAATATTGACTTTCGTCTTATCAGAGGTAA
AATCTCTCAAATTGTTCATCTACAACAGTATTCTTAGAGTATCAGGgagg
tcagtactaaaatgtaagacatacattcgagtactaaaaggattttcaca
aatttttaatatacccccacctatttttcgaaaatgttattttagtacac
aactaaaattattttaagcaatttaacgtagataccacctattttttgcc
cttttacggctttaaatttaccaaaatggggtcattgttacaaacctagt
cgaatttagtgcatcaatctgcaaaataatataattttattACTAAACTG
TGCTGAACTGTACATgaaaatatatttaaaaaatatttaaaaaatcggaa
aaattctgaaagatttctgaagattttttcgaaaattcctgaaaaaaaaa
atcaaattttttccaaaattgttaaaaaaatgctccatttttgctgattt
tagaacaaagtactaagatttttcaaaaatttctttaaaagacCACCCTT
tctggtattttagtacacatggtactaaaattatttttgagcttttttgc
agtaccaccacgtcactaaatgtcatgatgtttgagattttagtaccgac
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNcccccccccccccctgagagTATTGCTCTTACACTCAATC
ATAAAGAGTTTGCAAAGTAAAATACAATACtttttcattgttgttttaGA
CTTACCACAAACGGCAGATTGCTATAACCGTACTTGTAGGATGCTGGGGT
CTCCGTTTAACTGGTTACCTGTTTTATCGCATACTGAAAATCGGGGAAGA
CAAGCGATTTGATGATCGTAGAGAAAACCTTTTAAAATTCGCAGCATTCT
GGATCTTTCAAGCCTTATGGGTGTTTATTGTCAGCTTACCTGTTATGTAT
ATCAACTCTCCATATGCTACTATGATACCAGACGAGCTGAAAATCAGTGA
TTATGTTGGGATCGCTTTATTTGCTGTTGGGCTTATCATCGAAACTATCG
CCGATCAACAGAAATTCAATTATAGAAATAATCCTGTGAGTTAAAGAAAT
ATTAATATACAATACTCTGATACTCTTCTACTAAGATGTTTGGGACTTTT
CAATAACTTTCTTATTATTACAGTTGCAACTGAGCGGATCAATATTTTAA
TTCAAATTACAGAAATGTCctaataatagaggttcgaattagtgaCTTGA
TGTAATTGGCTGTTCTATTGACATTAATGTGCTTTTTTATTCTTAGGATA
ACAAAGGACATTGGTGCGATACTGGTCTTTGGTCTTGGTCACGTCATCCC
AATTACTATGGAGAGATCCTTGTTTGGTGGGGTGCTTTTGCTGTCAGTGC
TGAAATTGCTGTCTATGACAGTAAACTATGGACGTCAGTTATCAGCCCCT
TGTTTTTAATGTCAATTCTGTTGTTTTTGAGTGGAATTCCACTGTTGGAA
ACTAAAGCTGATGAGAAATATGGCAGGTAAGACAGCattcatttttaaac
tttgggaAAGTACATCGATGATATGGAAGACATGTTCAAAACTGCTGGAA
ATATGTTTGTAGCCTATTGTTGACGTTTTTCAAAACAGTCCTAACCCCAA
CTGGGGATGTAAAAGAAAACGAGAAATGTTAATAATAGTTTATCATCTGT
TGGAGGTTCTCTGTATTGATTATTTCCccttcatttctctcattttccAG
CAAGGAAGAATATATCATATACAAGAAGCGAACAAGCCCCTTGTTATTGT
TACCACCCTACCTCTATCAACGTATGGGCAAAATCATCAAAGTGATGTTC
TGTTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGA
CCAAATGAACAACGCTTGAANATGGGCAAAATCATCAAAGTGTTGTTCTG
TTGTGAATTCCCGATGTACAACAATGTTTCGCCTACTGAAGAGTACGACC
AAATGAACAACGCTTGAATAGATTTGTTCACTGTATGGTGGCGAAAAGTA
AGGTTTTTTGAACCTTTCCCACCTTGTATGATCTCTTGTTCTTTGTTTTA
TGACCCATGGTTTTTCAATTCGTACTATTTTGAAAGGACGAGCTGAACGA
AACTTGCTAAATTTATCTATTGGATTCAACATTTTTGGAATGAACATTAG
CTGGTGCTAGACGTGTAGCATGTGTTGCGTTGTAGCTTAAGTTCTCAGTG
ATATATATAGAATTTTTTCTGATTGAAATTGGCTCTCGTAAATTGTGATT
TTTTCTTATATattcgaaattcgaaaatttATGCACGAAAGAGATATGTA
TGAAACTTTCGATCCAAATTTGCAAATATGCAAATCTCGATGCGCATCTC
AGAATCTTTTCAACAAATCAAgttgttcttctttttattttacccTAACT
ATACTTATTTTATCCTACATTTTCTATCCTTTTATCCATATTTTAACGTA
TttatcctaatttgcaataggaCTTGACTGCACAATATTCTAATTAACAA
AATGTCATAAACTTTTCAGTTCTTTTTACCACTGAAGATATCGTGTgtac
gctttttcttttataagaataacttcagggtgagatttcgggtttaaaac
aataggcctattgtttagtttagaacaatagaaaaataataataataatg
ctcACCCCCAACCAAAGTACGCCATAGCTTCAGCCCCACCCCTTTacttt
aagaaatattttggcctttaaagaacctgggggctaaaattactAAATTG
TTAGGGGGGctagatgatctgactgagactatgggggctgttcagctaat
ttcaaaagatctcttatcttactattaaatcaaatataaaaagcaaaaga
tttgtaaacataaatattaatacaagtaaaatttagttttcatttatcag
tactgtactcgcatatattttttattgactctGTACTGGGGCGGGAGAAC
ATAATTTTTGGGGGGGACCTGAAgtgttaggggacctagcacaaggcaaa
ttgttggggggaccttactttgttggaGGGAGTTAGAAACCTGGGTGAAG
CTATGTAACacaattcttataaataaaaaagcgtgtattaatTTTGGTGT
GTATAGTAGTTAATTTGGTGGTTGCCCAAAATGGGATTTTTGGtgggtat
ttaatttggcggatggcagaatttgtaaaatttggcgggTGGGGAAATTT
TTAGGCACTTGTAAATAAAGATACTTGgtattttaatagcttttacctaa
aaatactaattttagatttttaaattttcatcctAAATAAATTTGCCGGG
TATCTAATTTAGCGGTTTTACCAAATACCGCCAAATCCGCCTAATTTAAT
CCCCGTCCATTCAGTTACCATGCTTCTATGCATTTTCAACGGCctcaaaa
tcacattttcatgTTATATACTGTTTGTATATTCGATGATATTttctgtt
aatattttcttattcatAGTATTTTAGGGGTCTTAGTTCAGTTGGTTTCT
GTACACCTATTTTTATACACCTAACAATACCTTGTACATTGTAGCACTAT
ATACAATATAAATTGATTTTAGTCTTAgcgaagaaataaaaaattctacC
CAAATCAACTCAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057917TCONS_00057917Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057917-proteinTCONS_00057917-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:103459..107774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.33	12.8	42.85	50.69	16.14	12.42	11.81	11.99	9.16	10.55	9.22	8.49	10.47	8.93	9.86	12.49	17.54	31.82	7.69	7.72	33.61	30.33	16.98	18.6	9.3	10.72	13.52	8.15	35.95	20.59