XLOC_036527 (gene) - C. hemisphaerica

Overview
NameXLOC_036527
Unique NameXLOC_036527
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:298499..302200+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036527 ID=XLOC_036527|Name=XLOC_036527|organism=Clytia hemisphaerica|type=gene|length=3702bp|location=Sequence derived from alignment at scaffold_302:298499..302200+ (Clytia hemisphaerica)
CCATTCTAGTGATTTTTTCAGGTGGTTCTTTGacagatttttcattttta
tgacgACTTTAGATTCACATCTTTTTGTAGCAATAGGTtggtaaaattat
tttaaaggctAACATTTTTATTCTGGGTAGTCTTAGTAGATCCATTCAGC
AGGCTTACATATGTCATGACTTTTTTTATAGTATAGGTGGTACAAATGCT
TATTGAAGTCAGTTTCTTTCtgataataataatttttcaaatttctttta
gaaaatTAATTATCCAACATGGCTAAGAGGTTTACAGCTTTGATCCTCGC
TTACCTCCACCTGAGCGCTGTTTTCACACACAACATCATTCGCTCACCAT
CAGATGGTTACAACCAGGCGCGTTTTGTGTTAAGACATATCAACAAAGTT
CATGCGACCGCGCATTACAGTCAATCGAACGTCACCTGTATCGCAAAGTG
TGTCGATAAATGTGTGACTGACACTAACTGCAAATCGGTCAACTTCTTTC
TAAACCAGGACTCTGATACACTACCGGATGATATTTGTCAATTGGTATCA
AGTGACCTTACTGATAAATATGAATATACGGAAAAGCCTGGCTGGAAACA
TTATGACACAGGACGTAGTGTTTTGACCAGAATCACGGTACCGGCAGGTT
CAGGGTGTATGTTCCCAGAAAGCGGTTCAGATTGTTCCTACGTTAGTACC
AACAGTTTGGAGCTCCGTACGGGTGATGAGTGTAACAGCGTACGTGCCTA
TTTTGAATACGATCGTGATGCAGGTAATATAtccgtttttcaaaaaatct
aaacTTTTTTGTACGTATTTCAAAAAGATGATTTCCTGTCCTTATTTCAA
GACTGCGTAATGAATTGAAAAGTTATGGGATTAGAAATAATTGATTTCTT
ATAGAACTTGAACTGGTGAGAGTACTTGtttatgaaatctttttttttct
aggtACTTTGAAACACTATTGTTCGGGGCTTTACGTTTGCCCTAACAGTA
TCCCTACAACAAGTTATATAGCGGCAAAGATTCAATCACTCTCATCATCT
TATAAATGCCAGGGTAATTTTTATAAAGCTGGCGATGAACAGTATAAATG
GAGAACTAACTTCGGTAAgcaaatttatttcattttacttttgTATTTAT
TATGACTCAGAGGTTCCTACGATTACATTTGATTTGATCTTCTTTTCTGT
ACACCAAGAACTCGTACGAATTTGGCATTTTCACAacaaaattaacgaaa
atttgtcGATATCTGCcctttttgtcattattttgtTAAGTGTTATATTG
GTGTAATAACGTAAAGATTTTTAGAATCTTTACCGGGGATTCAAAATAAA
TCTGTCAGTATTTTGACGTTGGAAACCCTACTGCTCGCCTACCGACCCTT
AGTATCAAGCTTTGACTCATACAAAtatttatatttcttttagaTAACGG
AATGGAATTCAAAGGGGTTTGCTTGTACGTTAATGAATTGGGTGTCAACC
ACAATTTTGATATCAGTCACGCAGCATGCTATGACGGAAATACAAAACAC
ATGTTTGCTTACGATTTTGGTGAGTAGCAATGTTTCCCATCCCCTGTTTT
TTGAAAGAACTGATGAGACAGAAAGAGACTAACTATCTAATGGGAATTTC
TCACTATTTAAGGTGATTTTTTAATCCGCCTTGTCATCTTTTTCAGATGA
CTGGACGTAGATGCACCTACCAAATtgtaaaattaagtaaaatAGACAAA
CTTTAGAGTGGTTCTAATTATTGTGTGTATATTTCCTCTGATCTTCGATG
TGTTATAGCTTCGNAACTTTAGAGTGGTTTTAATTCTCGTGTGTATATTT
CCTCTGATCTTCGATGCGTTATAGCTTCGTTTTTTTTCACAACACTGCTT
CTCATTTTTCAACAGAACAAGGACCAGTTAAAGCCAGTATTTACTATTCA
ACCGAATCGCATACCACATACAGTGGTTTTGTGGACTACATCAAAGGGAG
GATTGATTACAACAGCCCACCTCGTGTTGAATACCTCAATGATTTTTCAT
GGTTTCTGTCGTCACCATGGGATCATGTTGGCATTCGCTTACAAGCGGCA
TTCCGTGCTCAAGAGACTGGTGAATATACTTTCACTATCCAAGGAGATGA
TTACGGTGTGATGTATATCCACAGTTGTATGACATGTACTGATTATGTTC
GAGTGGCTCGATTCACCATTTCACAATGTTTCAATTGTCCAACGTAAGTT
GGTCTAACCCTACCCTATTCAATATTTAGTTTCTAAGCACTTTCCATGTC
AAATATTTTATATAGAGCCGAAATGTTACCAGTATGAGAACCTTTAgatc
atgttcagacgttacggtttcgtatcgTTCCGGCATGGTTTCtgttacgg
atcgagagtgttcatattggtttcggaacgtttcggagcaagaaaacgga
gcagttccgttccgatgaaaaaagtggagcgaaatcgtttcgatctgttt
tgctttgtaacgtcttttttttgacgtttcaaattttgacgttcacactt
gtttcggaacggTCTGCAGATGGTCTCAAAGagctttgaattttgaattt
cgcAAAAAATAGCTATGTACGTCGTGTTACCGTAACATCAGTTACCAGCT
GGCTTTCCTCCCACCACTCTTGAATGCCTCTCTACAAATTTCATGAATCC
ACAAATCCACAAATAAACCTAGTAGCATTTCCTACAAAAGTTGTTTGGGG
CGTTCCTAATGTGGTAtggattttgtctttttttttaacaGGAATTCAGA
AAGTTGGCCGATCGCAATGGAGAAAGACACTGCTTATTACGTGGAAGTGT
TTTTCTTGGATACGGGAGCGGACGACAATCTCAATATGAGAATGACCACG
CCTTCTGGTGTCAAACGCCCGGTTAGTTTCAATGATCTGGAACCGTGGGC
GCCTACATATTAAGAGAAGAGTAGAAGAGAAATAACGACGAGTAAGgttt
gacgaaagattttttcGGGAAGAAACAAATTGTGAAATATAATAAGGGCT
GAAAAAGTTTTATCAACTTGAGTAATTGAACCATTGAATGTTATGTATAG
ATCACTGAAAGccattgattgattgaaaaaaagtccTGAGGCGTACGAAG
TTttgctttgtttgtgtttggTAGATCGATTCACTGAAAAACTGAATATT
ATCATATAAGCAGATACAGAAAGGTAGCATTGTCTATATATATTGAATTG
GATCAGACATCATAAGAGTTTGAAGTCTTTTGTTTGAAGAGACAACTTAA
CACTCTGAATTCCTTTTAAGGGATTTTAGAATTTTGTTCTAGCACACTTT
TTTTTGCACATTCTTGATGTAGAAACAGGTAAAAACAAAAAGTATGAGca
caattttatttcatttttctttatttttaaatgtATTATTTAAACTATTA
GTAAATGCATGATACATAAACATATACAGTATCATACAAGCTCAATTAGG
AATAAGAGTATTTCTCCTTAGTCGAGTTGTAACTCCACCAATTGTCTTCT
TCGACCAAGCTTTAGGTCCACTTCCTGTCCATCTTGTAAAAGGGCATCTG
TCCACTCGTATACCTGCGAAAAATACAGTAACTTTCATCAATTTACCAAA
AAGGTGGAGTGTAGTATAATTCAGATCAAGAGTACCTATTGCACTAATTG
CC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057927TCONS_00057927Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057927-proteinTCONS_00057927-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:298499..302200 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61	0.78	0.25	0.18	2.17	1.82	1.49	1.56	0.69	1.28	0.49	0.86	2.41	2.24	0.92	1.22	0.78	0.91	5.26	6.43	0.58	0.75	0.48	0.79	1.35	1.86	0.19	0.04	0.26	0.25