XLOC_036539 (gene) - C. hemisphaerica

Overview
NameXLOC_036539
Unique NameXLOC_036539
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_302:178132..181103-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036539 ID=XLOC_036539|Name=XLOC_036539|organism=Clytia hemisphaerica|type=gene|length=2972bp|location=Sequence derived from alignment at scaffold_302:178132..181103- (Clytia hemisphaerica)
GGATCAGAATGACGTTACAAAACACTCTAAGTTTGCAATATAGGTAGGTT
TTAGACAATTTTAAGTGGTTTCTCGGCTTATAAATTCAAGTTTTCGCCCA
TTTACTATCCAAAGGGCTTATGATGTGCTCAGCGTTATCGGTTTAGGCGG
GTGCGACGCCGGTCGACGGCTGAATATAAACTTTTATTATTTCATTACGA
TAGCTTTCTCTATGAGCATTGTGTGCGTTCAGCAACACTTAACCGGCGTT
TGCGACGACGGGAAGCGTCTAGTATCTGCTGACCTGTTTTCGTATTTATT
TTTGCAAATGTTGGGCAGTATTTCCCAACCATTTTTAAAGATTTTGACCT
GCAACATATGAACTGGCTGTATGCATTACTGTTTATTGTGACTGTGATTT
ATTATTTATGATACGAAGAAGGGTTTAATTATTCATTAAATGGCGAGACT
TAATTGATTTTTCTTCAACCACTAAATTTTTAATCAGAAATGGGTTACAT
GCTCAATTCATGACACCAGCTAGTTTTCAAAAATTCGTTTTCTTCATAAC
ATGAAGTTTTTGGAAACAAAATCACGATTGAAAAATGTGTTGGTTAAATA
GTGCAGAATCTGAAAATTGGTCAAAACTTATGAGACTAATCAAGGAAGCT
GGTCACGAGTTATGTAGCCACATTTTACATGTTAAAGAAAATAAACCTCA
AAATGATGCAAAACTATATAAATTTTTCTTGCAAAAACAAGCTCATTTTA
ATACACTGTTGAAGCGAAAGAAACTGAAGAAAATTCAATTTGATAAAATT
TTTCCAACGAATGGGAAGACAGACATTTCTGGGTTCGATATCACTCTTTT
CACACTCGTCATTGAAGTCATGTTCGGGAAAACAAAATACAAAAAAGAAA
TGAAGGAGTTGAGAGATTGGAGGAACAGCATAACACACTATGGTCAAAAA
GCAATAAATCGCACCGAGTTTGAAAATTATTGGAATGATTTTATACAATT
TATAGATGGCTGTGGTATAGATGGAAAAAAGTTTTCACATTTGAAAGGTA
GATATGCTAAGTTATGAAAATGTTGAAAAAACTATGAACCTTTTAAGGAC
CAAAAGAAGAAATGGGAAAAGCCCAGTAGGAATTAGAAATTGTTCTTTTG
GGTCTTGTATCGTTTTTTGATTCAGAGAAAGGTTTCAATGTTCGTATTTT
CAGCGAAATTTTTAGTCCATGTATAAATTTTGATAAACTGTTTGACTAAA
TTCTGTCTGTCCTCTAGTGAATTTATTTGAAAATTTCCAACGAGCACTCA
AACAATAACTAAGGCTACAAGGTTTCCTATTCATTCAACTTGGCTAGAAA
ATAGTTAATAAAGTTTTCGTTCTTTTAAAAAACCCACATGAAAACCAAAA
GATTTGGCGTTTATTCGAAGTAATAAACTGCAAACTTTTTGGTGATAACA
TTTTCGGTTTTATTTTGTAGATACAAGAAAGAACATGTGGATTTGGCTGT
GTGTTTTAGGCTTGATTGTTGCGATGATCTCCTTTTGCAGTGTTCAACAA
AGTAAGATTCCCAAATTAATTTGATGAAAATCTTTTCCAACTACAATTTG
TTATTTGATATTTGATATACTTTCAAATGTTCATGACATAAGCTTCTGAA
AAAACTATACAGTTGCTTCAAATATTCAATAAACCCTCGGATACTTTAGG
CGTACAAACTTTCGCGAGCAGAAACTTTCACGAGGTCGAAGTATCGCAAA
ATTTACGTGAGCATCAAACTTTCACAAATCAAGACATAAAAATGAAAATT
TTCGTATGAAAGGAACAAACATTTCTTGAATTGGATTGAAACTTTATGTC
TTTTGACTTATTTGGCTTTAACAGGCTAAAAAGTACCATAAATCTTACAT
TTTTACTTTCGCGAAAAGGGCTGACATTCGCGAAATTGCGAAAGTTTCTG
ATCGCGAAAGTTTGTATGCCTAAAGTAATTATTTGATCTCATTTTTCTTT
CAGATGTAGAACCAATGTCGGTGATTTTTGAAAGAAAATTAAATACGTCC
TCAGAAGTTCTGAAGAAGTATTACATTGAAACCATTGGTCAACAAAACCT
AAAAACAATAAACAAGGTCTATCGAAACAAGAAAAGATTTTACGTTGAGC
TTATGATTGCAACCAAAGAAAACTCTGATGATGTTTTCTCAAAGAGCAAT
CGAGATTCTGAGGCTAAGGATCACCATCAGAAAGTCACCATAGATCAACT
GTTGGATTCAAACAGAGAAAATAACATGGTTCTTATACAGGGGGCAGGAG
GCGTTGGGAAAAGTTTCATGCTTGAAACAGCTGCTCTACATTGGGCAGAA
GGAAAGATATGGCCAGACATCAAGTTTGTCTTTTTATTGACTTTTCGAGA
GCTCAATCTTTATACAAACACATCTTTTAAAGAGGTTCTATCAAAGAAAT
TCAAAATGATCTTCAGAGGCTTGGAAATATCTGATCTTGATAGTATTGGC
GATCAGACAGTTATTTTGATGGATGGTGTGGATGAATTTGCAAAGCTGAA
CGAAACACTTTCCCATGAACATCAAAGCGGAGATAACTCTGTTGCATCTG
GCTTTTATGAATTGATCAAATCAAACTTTTTACCTGGAAGGAATCTGATC
ATCACGGGTAGAACGTCTTCATGTGACCAATTGAGAAGCAAATTTAAGGA
ATTATCCATCAAAAGTTTGAATGGTCTTGGGTTCAATACATCACAAATGA
ATCAATACATCAAAAACTATTTCAACTTAAATGAAAGTAAAGCTGAAAAT
TTGATTGTTGCGATACAAAAACATGAAAATTTAAAGTTGATGGCAAAAAC
ACCAGCATTTTTGTGGTCTCTATGTGAACTACACCAAAATACAGATGGCT
TTGAAGAAATAGAAACTGTCACTCCTCTATTTATCTTACAATTGAGCCTG
TTTATACAAGAACATCTTCGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057966TCONS_00057966Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057966-proteinTCONS_00057966-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:178132..181103 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0.24	0.3	0.37	0.37	0.28	0.57	0.52	0.22	0.29	0.02	0.27	0.43	0.37	0.45	0.79	0.25	0.31	0.9	0.94	0.28	0.46	0.18	0.32	0.31	0.47	0.84	0.45	0.85	0.89