XLOC_036601 (gene) - C. hemisphaerica

Overview
NameXLOC_036601
Unique NameXLOC_036601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_305:13380..17281-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036601 ID=XLOC_036601|Name=XLOC_036601|organism=Clytia hemisphaerica|type=gene|length=3902bp|location=Sequence derived from alignment at scaffold_305:13380..17281- (Clytia hemisphaerica)
TTTTGGTCACTTTTCAGTTTACGTTTTGCGGTCGGTTGCTTGGTTGAACT
TGGTTGATCTCTTTTTAGTTCCATTTAAAATTTTATCACCTTGCCATCAC
CTAATTTGCATATAAGTCTCCTTTCTTGAATTAGCAATTGTTTTTGGATT
ATAAAATGTATGGACTTGGTAAAGGTAAGGAGACATACTTTCATCCTACC
GTTTTATTATTTTATTACCGTTTTTTATTTACCTAACTTCACTTCACCCC
TACCTTCCTTCTAAAAAGTTATAAAAAGGACGATTTGATTTTTAGAGCAG
AGTTTCTCTTCTCGTTTATTCCTTATTCTTCATTCCCCACAAGTCTCGTC
ATATTTCTATTCGCTCCTCTAAAAATAGACCTTTTTTCAAAGAGGCCACC
CTGTTGAATAATTAAATTATGTAGTCCAGCAGAAAAACAATGATGAGACC
ATGCATAATTATTACAATATGCATGATACAGTAATTATGCATGGCTCTAT
CATTGTTTTTATGGCTGGACTACATAATTATTCAACAGGACGTCCTCTTT
GAAAAAAGGTCTATTGCTAAGTCACTCCATGCAGATGCATCCAGCATCAG
CATAAAACAAAAATTCCATAAAAAAGAAAAAAAGGCATAACACACGTTTT
TTATAAGAACATTCAAAATTTTTAATGTCTTCGACTGTTCTTAACTTTTT
GAGTTTTAAACCTAATAATATTAACATGTTTTTTTTTCCCCTAAGAAATA
AATAGGGTGTTTTTTTTTATTGGTGAGCCCACAAAGTCTTAAAATGTTCT
TGACTTGTTCTTAACATCATAGCCATCGAAGCCATATGTTCTTTAGTTTG
TTCTTATAAAAAAACGTGTAGGTTTTGAAATTAATAACGGTCGTCTGGCG
GACCTAAAATGTTTACTGCCTGTTGTCCCAAAAATTAAAAATCAGTACAG
TATCCAATCAAAATTAACCCTGATCGGACACATTTTGTCCGACCAACCCG
ATGTCCTCGATTGAAATCGTAAAATATTAAAGACATTTTTCGTTCGAATT
TCTTTCCATAGAAAAGCCGTTCGTACCGATATTTGGTTGTCGAAAAAGAC
AGCAGCGCCACGCAGCCTACGCGAATCCAGATGAACTGTCTACTCTTCCA
TCTTCAAATTCAAACATACCAAGCAATCATAACGTCTCTCAAATATCGAT
GGGCTCTGACTTTGATTGTTTTGATATCCCGATGATGGCTGATGAGAAGC
CACCTGTCACAAAGAAGAAAATCATGCATGAGCAAAAACCACCACGATAT
AAACAAAATCAAGAACAACAAAGAAACACTTTCCAACAACAGAAAAAAAC
AAAACTAATGAAATCATTTTCCGAAAAACATGGGTCGTCTAATAACAGCA
AAACAATGGAGAAAACTGATTACATTCCGTCTTTTCAAAAACAACAACCC
TCCTATCAAAACCATTCTACCAGGAAATTTCCCGATCATGACGAACCAAA
ACATTATTTTTCTCGACAACAACAAGGACAGAATCTTTCAACAACGATGC
AAGACCAAGGACCTTCTAGAAAGCCTTTTGATGAAAAAACTTTTTCATGC
CAACCGGGAAACACGCAAAGGTGATTCTTCATTTAAACCAGGAAAAATCA
ATTAAAGTCACATTGATATAGGTTTTTCATTCATTGTAAAAAGCCGAAAT
ATTTTTGAAAGGTTTCTGATTTGAAAAGTCAAATAAGATAAAACTTGACA
ACATTTTCAGTCGGACTGGTCGCACCTTTTTTGAACGATTAATTTATTTA
ATTTTTTTTTACTTTGCTGCACCTTTTCTCATAGGTCCGGAGATTTCGGG
AATAATGAATTCAATCAAGGCTCAAAAGCCTCGTCTTTGAAATACGTTGA
AACGAAAAAGGTATAAAAAACTGATAATTCTTTGTAACTCAGCGGTTTCA
TTTTTGCAATATTCAATTTCGCGGAGGAGCTGAAATCTACTGAAGATAGA
TAGCCTTGAAAACTCTTCGTCTAAAATAGAAATTACGAATTTTCAATCAC
AAATTTGATTTGATTTTGAAAATTTCGCATGAATTTAACTCGCGAGAGTC
AGCAGAGCACACTGTTTTTGCAAGATCTATTTTCGCGAAAAAGGTAGAAA
TTTACAGCAATGCGAAGTTTAATCTCATGAAAATAATCCGATTAAAGTGA
GGTGTAAGGCTGGCAGTATCTTGATAAAGTAACGAAATAATCAATAATGA
TAGTTTCCTCTGCAGGACGACTCAATGATGGATATTTCAACAATAAACCG
ATCTATCATAGTAAGGAATAAGACACAATCACTTGCTCCACGTTTTATAA
GCTCTCGTGTTGGTGACATAAAGAAATGGTTAGATTTGCCAATCAATGAA
GAAACTTCACAAATTGTCTTCGAGCTCGTCGGTAAAGTTATTGATAATGT
TGAATTTTATACACTTTTTCGATCGTAGCCGCCAATTGCCGCGCGGGCGA
TTTTTTGTCCGTTTTACCACCCTAAAACCGCCCCAGTCTTTTTTTGCACC
TATAAAAGCAATAGAAAAAAGTGTAAAAAAGGATTGGATCAAGTTTAGGG
TGATAAATTAAATAATAAAGTGGCACGCGCCTGACCGCGATCGAAAAGGT
GTATTCTCTTAGAATTTTGTTGGTCAGTTTGATTGATTTGTTTTTGTATT
TCTAGTTGTGTATGTAGGGATATTTTGACTAAAACTTTCATGACTGAATA
TCTAAGACCCTTCTTTATTACCTTAGGTATCTTAGATTCAACCATCTCGT
ATCATTTACCTGGAGTTGAAAAGAAATTCACATTAAAAGATTCCTCAGGA
ACCATTAGGTAGGTAAGGTTTTTTATCCGAAACTTGCTTGATTACACCCG
TGTCTCAGTGAGTGATTGTTTTTCAGACAGGTAAAATTCAGTAGAATGGC
CATATTTTTAAACCAATCTTAATATTACTCTTGGGTATACTTATTTTTCT
CCACAATTTCATTATTATTCAGAGCAATGAACGGAAGACGAAAAATGATT
TTAACATAACTGAGTGTAAATTTTCACCTTATTTTATTTTCAGGTGCGTG
TTTTGGGAGATGGTAAGCATTTACATTCATTCACCATCGTTATGGTCATC
ATAAGAAATCTTCAAGAGCAACATGAACTCCATAAAAAGCTTTTTAGCTT
CAAATCAGGAGTAATAAGATATTATTTTCTCATATAGGACCGTAAAATTC
CACAACTTCGACGTGGTAGTTTGATTCGGTAAGTTTGGTAATATATCATC
TTTTTAGTCGAAAACGAACTGCTACATCCCTGTCTCAGTGACTTGGAGAT
CAGTGAGATAAAACGAACTCTAATAGTGGAAGTAAGCTAAGGATTAGTAC
AGTAAACATTTGTTAAAGAACAGGTTTACTTAAGAAATCAAATGTTCTTC
TATTCTAGATGTGTTGGCAGAATGAGAGATAGCTCCATCTTTCACTGCGT
CTCTGTTAGATCGATCGCACCAAGTGAGCAATCAATACTTCAAAAGTTTC
AACAGAATTGTCAACAGTACCTTCAACATAAAATGACTACGTTTAATGAA
GTCTGACTACTACAACCGTTTTGCTTCTTTCATGCTCGGATGAACTATAT
TAGAGCTGTTGAATTAGGCTGAATCGAACGCACTTAATAATAGCCTTTTT
TAGCAGGCGTTAGAAAGGAAAAGTGTCGGTTTATTTTCCACAAATATGCA
CGATCGATTTAATTATTTTAGGACTTCCAAAAGGAAATGTTGCGTTTTAA
GTTTTTAGCCTTGTAATTATATATTTTGTACCTTGAAATTTGCATTTTTA
AACAATTTTATGTGACTATGTTTTGTGTTTATCTTGAATTGGAAGAAAGT
CA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058082TCONS_00058082Clytia hemisphaericatranscript
TCONS_00058081TCONS_00058081Clytia hemisphaericatranscript
TCONS_00058080TCONS_00058080Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058081-proteinTCONS_00058081-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_305supercontigscaffold_305:13380..17281 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.05	0	0.06	0.07	0.06	0.03	0.03	0	0.03	0.16	0	0.04	0.02	0.03	0.03	0.16	0.2	0.06	0.06	0.1	0.15	0.15	0.11	25.31	21.55	0	0.04	0.06	0.12