XLOC_036734 (gene) - C. hemisphaerica

Overview
NameXLOC_036734
Unique NameXLOC_036734
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_309:894328..898862-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036734 ID=XLOC_036734|Name=XLOC_036734|organism=Clytia hemisphaerica|type=gene|length=4535bp|location=Sequence derived from alignment at scaffold_309:894328..898862- (Clytia hemisphaerica)
GTTAAGACATTTAACTTTCAGGAAAAAGAGTTAGAATATACACCCTGATA
GAGTTAGAATCATTGACGAATCTGGTTGACTCCTCCAGCAGTGCTCAATT
TTTAGTGCGCACATTAAATTTCATTTTCTTTTTTTAGATATTTAAAATGC
CAAAAAATAAGGGAAAGAAGAAGAAAAATAAGGGTCAAAATAAACAAAAA
CCCAACAAACAAAACAGTGAGGTTGTTGATCAATCAAACAGTCTTCAAGA
CAATGAAAACAAGGATATTGAACCTATCCCTGAGATAAAAGTCGATGTTA
ATCTTGACGAAAACAAAGTTGTTGAGACTTCTCAAAATCAAAACAACGAA
CATAGTGGAGGAGATGAAATTCAAGTTGAAGTTGTTCAAGTACAGGATGA
ATCAATAAATGAGGATAACAAAGACTCTTTTAACGAAGCTGATGCATCAA
CTACTGCACCAGTCAAAAAGAAACGTTTTTCCTTTTTAAGGAAGAAAATG
TCTGCTAGTTTACACAATGTCAATACATCATCGAACGATATCAAGTTGAA
CGAGATGAGTGAGCCTCAGGAGAGAGGTGTCCAACGTACCCAATCCATGA
GTACCTTTGATAGAGAACCCAAAAGTAAGATTCCACTTTACAAGTCGCGA
TCCATGAAAAAGCAAAAGAAAAACAATTTGACAGCTTCAACAAGCAACGT
GGACTCTACCAGTCTGGTGCTTAACCCAGGGATGGATGATTGGAGAATGA
GCGGTTTGTTAAACAACGTTGAACCCAAAGCTGAAGAATCACCCAAAGCG
TCGGCTTCTGTATCAATAACTCCTTCTCCAGTGGTTGCACAATCCAAAGA
TGAGCAAAAAGAGGTAACTNTGCTTCTGTATCAATAACTCCTCCTCCAGT
GGACGCACAATCCAAAAATGAGCAAAAAGAGGTAACTGCATATACTTATT
TTCCGTTGACTTCTACTTGAATCTGGTACTGTAGTTCACTAATCAAGGGA
GACTTGAAAAGTAATGGAGAAATAATAACTGCTTGCGTATATCTCAAAAA
AATTATCCTTTGACTTTCCTGATTTTCCAGTATGCTAGGATCTTTCATCT
CTTCCAGAAGGTCTCTTGGAAATCTCCATAAATAAGTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT
TCGTTATTATTTATACTAGTAATTTATAATGATAATGCAAATTAAAATTT
TATTGTTTGATGTTTGTCACCTGATTTACTGAAATTTTACAGACCAGAAT
CTATTAGAGGGTTTCGTTTTATGCTTACTAACGAAATTAGCTTATCTTTA
ATAATTTATCATTATTGGAAAGTGCTATGAACTTATTTTACTTTTTTCTC
ACACTATTGTTGCCATATTTTCCTATTTTCTAATAGACCTTTTCATAAAT
TATAACCAAGGTGATTAACTCCATGTGGATTTTATTGAAACTACTTTCTA
TCCATAAAAAAATTATTTAATGTCTCAAGGGACATATTCACCATGGTAAT
TGTTTGAATATGAGGCAAGTGATGTTCATGATGTAATCTCATGGTTGATT
GAAATTCGATTGACGTTTTTGCTTACGTTAATTTGTAATTTCCCGCGAAC
TTGTAATTTCCCTCCTAGATTTTGTAATTTCCCGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTCATGAATAGATAAACTGATTTTAAACAGGTATATTTGTTTGTCTCATT
TTTAGAATGAATCGATTGAACTACAACCAACGATCACAGTCGAAGAAACG
AAAGAAGAACCTGAAAGTGCACCTGATGAGGTTACTGTTCAAGTGGAAAC
ACCGGCTGAAGAACCTGTTGAGAACAACATTGAACAGAATTCTCCTGAAA
AACCAACTGAGTCTACTGAAAGTGGGGCTGGTTCGAGCAGGGAAGAAATC
ATCGATTCTGAATCTACACCACAGCTAATAGATGCCACAACAGATGCGGA
GCTTTACGAGTTCGAAAATGAAAACAAAGTTGTGATGGTACAAAAACTTG
AAGACGTTTTGCGAGAAAAGAAAATGGTTCTACCTGAGGATATCATATCC
AGTGATTGGCTGGTCCTCAATCTTGCTAACAGAGAGATTCCCACATTTTA
GAGATATTATATTTTTAAACGAAACACATTATTACAATTGGAATGACAAA
CAGAACAGAACAGAACAGGGTAAATATTATTGGCACACACATTTTTTATT
AAATTGAAGCATTAAAATACCATTTTAAAATCTTATTCGCATCCTATATG
GCTTTTATTTTTTTAATTTATAACCCCTTTCGATCAGTTTCAATTTATCT
TCATATATCATTTTNACTTTTATTTTTTTTATTTATAACCCTTTTTTGAT
TTATCTTCATATATCATTTCATTTTACAACATCACATTTTATTTTTACTA
GTTCTAGAACAGATAAGGAATGTGAACTTTCGTTCGGGAAAGGTTGAGTT
GTTTAAAGGTTTTATTTTTATAATATTCCATACCAGGACAGTGTCTACAC
CTCTTGTTATATTATGCTGATATAAGCAAAAATTGTTTTTCTTTTCCTCT
TTCTAACCAATCTTGCTCCACATCCGTGTCAATCCAATGTGAAAAAGCTT
GTAAATTAAAATTGATGAGTAAGCAAACGATATCACTCTTATTTAAAAAC
AAAACCTTTAGAGATAATAAAACATAATCTTCTGAGACTCAGAACAGATT
ATCAGACAAATTATTTTCAGATTTCTGAGCTACAATCAGTGTCATAATAT
ATTGGCACTTTTGGCTAATTTATAATTTTCGAAAATTGAAGTTCGAGCGA
GAATGTCAATTTTTAGGCCTTCAACTTGATTTCATCGAGTATTTCGATCT
GGGAGGGATTTATTGGTTTCTAGGCTATATTTCAAGCCCTACTGGGCCAT
TTTTGAACTTTTGGATCCTCAGATCCTACAAATCGATTGTGGTTTCAAAA
CACCCCGGTGAATTTCCCTTTTGTGCCAAGTATTTTGTCCTTGATTGTAG
CTCTTTCTTTGATAAACATTCACCTGTATATTCTGGTTTTTAATATTTTG
GTCTGATTATCGACCAAGTTGTCTTGAATCGAGAACTATTAATCAGATGA
GATGGAATTTTTACAAGATACTTTGATAATTGGTCATTCGAAGTAATAAA
AATGATGCGTTCTTTAGAAAAAGTAAAAAAAAAACAAATCAAATAGGAGC
TTGTAAAAACTCCATCTCGTCTCAATATAATCGATATACATAACACCGTC
GATAACAACAAGAACCAGTAAATATTTGATGAGGATCTCCTGTTTATACT
AATTGACACTTTGACTGACACTTTTCCACCTGAGTTATATTTGAGGTTTT
TATAAAATTGTTCTTATAAGAAAAGATTGCTACCTGATGAGGACTGTATG
TATGCACCCTATATCATCATAACACACCACAGGATATTCGGAACCTATCG
TTAATATTTAAAATGTTTTAAATAATTCAGAATCTTCGTTTAACCCTCGC
AAAATAAATCTCGTAACTCGAACAATTTCAAAAGCTCNTCTTCGTTTAAC
CCTCGTAAAATAAATCTCGTAACTCGAACAATTTCAAAAGCTCTTCCTAA
AATTGATTGCCTTGGTTTAAAAGTTAGCTTGAAAGCTACTAAAAGTGAGA
GTAACTGACCAGACGTTAAACGAATATGACGGACTGATGGTTCCTATGAA
AAGGTCTCTATATTCTTACCATATGCTTTAAAAAAAATAATGTTTGTGCT
GTACATTTTTTATTTTTTTTCTCATTTTTATTGACGATTTTATTTACTTA
CGTAAGAATGCATAGATTAATATCCAAATTAAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058325TCONS_00058325Clytia hemisphaericatranscript
TCONS_00058324TCONS_00058324Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058325-proteinTCONS_00058325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:894328..898862 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.06	7.03	3.45	2.97	104.8	75.56	74.56	81.62	57.55	56.94	37.7	40.11	32.69	27.24	29.13	31.33	15.7	14.77	28.65	38.15	12.89	12.38	15.51	15.87	9.61	12.81	18.57	13.21	18.93	20.27