XLOC_036845 (gene) - C. hemisphaerica

Overview
NameXLOC_036845
Unique NameXLOC_036845
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:1009682..1020108+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036845 ID=XLOC_036845|Name=XLOC_036845|organism=Clytia hemisphaerica|type=gene|length=10427bp|location=Sequence derived from alignment at scaffold_311:1009682..1020108+ (Clytia hemisphaerica)
cagCTTGAGCAAGAAACAAAAGAGCTGAGAGCTAGTCTAGAAGATGTCAA
GACAACGAACGAGAAACTAAAAGCCGAGAATACTGAGCTATTGCAGAAAA
TTTCCGATAATGACGTCATACTTGGAGAGTTTGCAACTTTGAAGAAAGAC
CATTCCAAAATCAAATTGATTGAAGCACGTTTGGAGGACTCGGAGAATCG
AAATAGCGAGAAAGATAAGAAAATGCAAGTTCTGAACGAAAAAGTGGATT
ATTTGAGAAGCCTTCTGGTCAAAATGGAAAAAGGGTATGGTATATTTACT
ATTTCAGATTTTCTCCTAACTACTAACTAAGATCACAATGTCAAACAACT
ATAAACCAAAGCTGTTATACTTTAAATGATTGATTTAGATTGAAACtgaa
attctttaatttgaAATTCCTCTTGCAAATTCGAAATATAAAGTAAAGCT
GAACAAATCAATTTTCGATTAAAATGTGAGATTCACTTTTCTGTTTTCAT
CGTTCCATTACAGAGCTGCTGAAAAAGAAATGGAGAATCAATACATCATT
GAAAATAACCAGCTAAAAGAAAAGGTATGcattattaaaatcaaaaatga
ggGGTTTTAACCAGTTTGTTGATTTCATCCCTTACAGCTACTGTACCTAC
AGtttcactgatttttttcaaaattattgtaCTTTTTGTACCAATCTAGG
TCAAGGAGCTAGAAGAACAACTAGAAGCTCTTAAGAACGCTCCTGTTGTC
AAACCAGTAGTCGACATTCACGCCTCGTCAACTCAAGACACGGCACTCTC
TATCGACGTCGACGCTCCGAACGTGCCGTTACCAAAGCGTGAAACAGTTG
TAACACCGCCCAACCATATATTTGGTATCGCTCCACCTACAGTTGATCGA
GTGTTAAAGCCAATCTCCCCTCCCTTGTCGCCGTCACATTCCGACACCAA
CGACGCCGATGTTGGTATAGTACTTCAACCGTCGACGGTGGACGTCACCG
ACATAAATGCAAATACAGACACTACACTGCCAACAACCGCAATTTACGCA
AACACCAACATACAAACTTCACCAAAGATTGATACAGAGGAAGCACCAGA
TATAGAGAGCGAATCAAGTCCACCCAACCCAGTCCCAAAACCACCACGCG
GTCATTTTATACCAGACATTGAAATCGACGATAGTAAAAAACAACCAGAA
AAAGACATTACTATTGAGAAATCTTCACTAGACTTAAAATTAGATTCAAC
GGAACCAGTGTTAACAAGTGAAACTATTACGGCGACACCACCACGGCAGC
GGGCAATTCCAGATTCGTTACCTGTGTTAAAAATTCCACCTCCGCCCTTG
ACAACACCGCCCAATGAACAAGCAACGCCCACTATCGAGAAGATAGTGAT
CGATTTGGACGCTTCAACAACGATGGTATAATctagttttttcttttcaa
gatttcttatCCTGTTGATCACGAGCGACGCACATTCATTAGCCCCCTGG
AAACTAGCCTTCTACTAAATACTAATAAGAGTTgaaaaagaaccaaaaaa
atGAATTATGATTAGAAGAGAAAGAGACTCGAGCGGTTCCAGATTTTTTT
CTGGGAGCTAAATCAGAAACCTCCTATAAAATCATAACGCAACCCCTTGT
ACTACTACCTACCCCCCCACCCTTTTAGtgacaaattttaaaaatcctgA
AACATCTGAACATGTATATTCGTTAAAAAAATTCGCCATAGGCCATTTcg
cagtcgaaatgaatcatgggtaatcaggactgattgtgcctccataacgg
cttcctgttggctagacgcaaaatcAGGCGATATTTTAGACCAACAGAAA
GTCGTTATCACAGCgcggtggtcctgattacccatgattcatttcaactt
tgaaattgCCTATGCCTCATAAATGATTTCAGGAGAACAGCATTAAAAGA
gattcaacttttttgcttGTGTTCCTTGACCAGGCTCtttattcaattga
cattgttcTGAAAGACTAAACCCATGCTTAAAATGATTTCAGGAGGACAG
CATTGACGACAATGACCAAGGACAATTTCAACTTATTCAAGAAGATGTGG
ATGAAGAGAAAATCTCATTAGACGAATACGGTGGCGGATCTGGTAGACGT
CACACTGAACCTACCGTCAAATTGAAACGTGACGAATCTCAAGAATTCTT
TGATTCCTCTATCTCATCTGTTGATGGTGAATGGAAAAGGTTGGACAAAG
AAGCTGAAAAGATTGCCGAACAGGTATTTTTACGTTTGAAATACAGAAGA
AATTTGAGTTGTTTGCCTGAGAAAAGATATTCAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNccccccccccctgaatccaggggtGGA
GGACACTATGTTCAGGGTGTCTTATTTCTAAAGAGGTCCAAGTGGGTTTA
CATTTTCCTTTCCTCCATATCAAAAATCCCCTTTCACTTCAAATTTTTGG
AGGTCGAATATGTCCTTTAGCCTTTTTTACCCGATACCCATCACCCAATT
TAACCCTTTAAATGCCATCATTCGTGTAGACGctcaacaaagaaaaatta
ttaaatctcGACTCGAGTTTTTTATTCGGGTGGGGTCAAAAAACGGGGTG
GTAATTTAAGGTCACTGTACAGTCCAAGATCGTTCCGGGAAATTGTTAAC
TAGAATTGGAGTCTATGCACCGCCTCTATGGGTGCTATCGAATGGTACAT
GGTTCGTTACGCTCTTATGACCCTACTACCGGTATCGAGTTAAAAGATTA
GCGTGGCGTAACGCACCCCTTCCTCTTGAATGGTGTATAACGAATAAAAT
AATTGATGatcatttttttgtcaaaggTCACTTTACAATCACCAAACAGG
CGTAAACAATCGACTGCCTCATCTTCGAGTGAAGATGAACCCACGAAAGT
CAAGAAAAACCAAAACGAAGATCCCAATGTTGATATAGGACGAACTCATA
GCATCAAGATTGACCAATCATATTTCCAACAGTCGCCAACGAAAATCAAT
GAGAGTTTTGATCAAAGTGTTTCTGTGTTGGATGACAGCAGTGATAATGA
TATTGCTGATAAAGTTTGTAAGTTGTCATAGTCACCAagaagccattttg
tttcttaGCTCACGCCTATCAAGTCACAGTttctgtcagcgccgtgattc
ctaGTGATTCGGGAGTAGGACCTTAAAATTTTACTCTTTGACGAAAAGAT
TCAATTAGTAAAAGATGAAGATTATTATTTATTTCACTTTGAATTTTATT
CTCTGAAGATAAAAtaatgtttagaaaaaaaatatctcaaataatATTAG
CCCATTCAAGAGTATCCTCAGAGTATATCCTCTATCTTCAGCGACTGCAT
TTTCTTGAATGAAAAACTAACCAAGGTCTGTCCAAAAAAATTCGCAGTCC
CTACTTTGAGCAGCTTGATGTAAGCTTTGTAGAATttccttttcttcatt
tttcactttcgttttcaaaattttagggAATTCTACAAAGCTTAAATCGA
GCtaatcaaaattatctttccaaggAGGTTTTACTTTTACTTGTGTATTT
TTTCCTTCAGAAGTAGAGTTTTAAAAAGTACAGACTACTATTTTTTATGG
AACAGACTATTTGATCTGATGTCCTCTAAATGACATAGTGTGCTAAAGAT
CTACTCCTCTGTTTCCAGCCTTATCGAAGAGTTTGAGTTTAGATTCAGCT
ATTCCTGCTACGCCGGTATTGGACAACAAAATGGCACAAGATAAGATCAA
TTTGAAAGGAAAACGCAAACCACCAACGCGCCAAGGAAGACAGCAAATGT
TAGACAATAATGAAAATTTCCAATCAGAACAACCGAAACAGGTGATGAAT
TAGATTTGTTCAAAGATTCGTCATATATATTTTCTCTTCTGCAATCCCCG
CGCACcgtaatatttggcacaaaaggggaattccctctaAACTTTAAAGC
CGCAAGTGATTCTTTAAGGACTTTAAAGTACCGTTAGAAAGTATTCAGAG
tattaactctgagttttaacattagacttaagacttaacagcttaggatc
tcaggatctaaaagctaaaaaatgttcCAATTAGGCTGAGAAAATAGcat
ggaagccacttaacccctcccaaatcgaaaaatccaaaaaaccaaaGGGG
AAATATTGAAACTTTGATTCTCGCTcgatctttaaattctgaaaaacgtt
aaaatacccaaaattgccattatatttcggcgccgattgtagatgccatg
aaatggatttacTTTAGATAGAGAAACAATGCTGAATTTTGTTCGTTATT
AGATTTAAAGCGAAGACTTAAggctaaaagaaaaaagagttacTTTAAgg
aaataaataattttctgtTAAAATTAAGTCAACTTAATTACAGTCTCTTT
CAATCAGAGTCAACCAGTTCAGTCAATAAGCCATTGTCACTAATTTCTCT
GTGTTTTTTATGTTATACAGAGCTCGTTGCCACGTAACCTTCACAATAAC
GTTGAAGTTCATGCCAGCATGTCTGCAGCTCAATCAGTACCCAATCTCAC
ATCAAACGAATCGAACGGACATTTAGATAAACacgaaaaacaaaaacaca
aattCGGTTTTCATTTACCCAAAGTGTTCAAAAAGAGTAAAGTCGTCAAA
CGAAGGTCAAGTGAGAATGAGCAATTTGCACCACACCAAATACCTAAATC
GAATTCAACGTCGGCGATGGAAAGACCAAAGTCGGCATACGTGCTCCCGA
CTCAGGCTGCAACTGAATACGACGTCGATTTATCAGATTCGAGACCGTCG
ACGAGGAGCCCGACCCCGAATGGCGGCGGCGTACAGATGCCAATGGACGA
GTTACACACTAAATTGAATCAACGCTCAAATACACCAACGGATTCAAGTG
TTGCTCCGATTCGGGATAAAACGGAATCGATGTCACAGATGCATGCGAAC
GAGACTGGTACTGAGGAAGCTGTCGTTCCTTTCCATCAGAAAGGTACTAA
TTTTTGAGCACTACAATACTCAAATCAAAAACCTTTTAATAATCAAACTA
TAATCAATCCCTATTTTACCTGACACCAAACAAATCTCTTATTTCAAGTT
CTTTTATCTGTTATTAATATGTTGGTCAGTTTCGAGAAGAGATAAGCGAA
AAATAATTGACCAATCAAATTGATATGATTTACTACTTATTGATACTTTC
AACACACCCAGCATAAGAAGAATTCCCAATTAAAAGGGCTAGAACGACAA
AGAAATCATTTACATTTCGCAGAAATTTGGCGTGTTTGTCAGTAGAGTTT
GTTTTTACGAATGGTAAATGATATTAACAAAGCCTGGTATACACGGAGAC
GAGGTAGGGAAATTAATATTTTGTACTAATCTACCTTTCGTTACTTTTTT
CAGAACAATCAATGTCGGATGACCCAGAAATCCCATCGACAACTCCGTCT
CCGGCGAATATCAACGGTACTTTAACGTCACCTGATGATGTCACTTTAGA
ATTATCGGCACCATCATCTTCGTCTGCGTCGTCGTCACTCTTTGACACGC
CCGCCCTCATTCAAAGGGCGGGAACAGGATCTTTTAATCGCGATCCAACG
CCCACCAATTATAACGAGAGAGGAATTGATGTTGGCGTCGAAAACGGTAC
AGGTAGGTTGACTCTACCCCAGTTctccaaatttatttttttttggaaga
atttGAAGTATTACTTATGTTGCTTTGGTTCTGCATTGAAAGATGATTCG
ATTGGAATATGAGTGAATTTACAGTTATTAGTGTTCACAGTTACTTTCGA
TTCAGATGGATTTGCGTCTTAGcgtaaggtaaaaataggctttTTCGCCT
TAGAATTTGGCAAATAATCCAGTATAATATTCAAAACCTTGGATAATTTG
TCGTATTTGGCTTCAGCTGAAAAGTTTGCTTTGAACACTGCTTTGAACAC
TGCTATTGTTAACAAACAACTTTAGTAACTTTATTGTGTGTACAGATCTT
TAATCACATTTTTTGGAATCTGAAAAAACTTGATTCAAATCTTCATAATA
TATCGCTTGTATTTTTAATAGAATTTTAAGGCTAGGTGCAGTGCCTTAGA
cacaaaatttgttttaggGGCCACATACTTAGTATCTAAGGCCCCCCCCC
ACGACACTAAGGCCACTTTTTGTGAGTCTGTTTGAATTTACcatccctct
aaatcgattctCTTTAGAACCAACAGAGGATGAAATCACTCACTGGACAA
GACGGCCTCCTACTGGCTGGGATGTCAGACAGgtatttataagaatacaa
tgtAGTTTTAGTTGCAAAGATTaagcttttccagaaattttccGTACCCC
CttcccctgttgaggatatttttCGAGTTCCACAGCCCCCCCCCTGGGTG
TCTAGcttaaaaaataatgaccccCTGAATATCCAACCGGAAAAAGTGGA
TAGAAGGGCTGAGGAGTATTTTTTATTctgtaccccctggatatccaggc
attTTGTCCTGTACCTTCTGAATATCATCACCCTCTTATAAAGTAGATAC
CTTCCCCCGATATCCTCAATAGGGGgtggggcacggactatttctggaaa
gcCCATTTATATTTAAATTGTTATGGAAACATCTTGTCCAAAGCAAAATA
GAGATATTCTACTAAACGTTTGCGGGTTGCTGGCCCTGATCATATGAAAT
CTCTACTAACTGTATTAaaccattttattttcaatttttacagGTTGGCT
TATGGTTGGTTGAAATGAATCTAGCACAATACGTTAATAATTTCAAATCA
CACAACGTGGATGGCCAAGCTTTACTTAGGGCTGACGGAAATCGCCTCAA
GGTGTGTTACTGTTTAATTAGGATTCATCCATCTACTCTGAGCTACCATT
ATAGAAACATGCTAGTATGTATGATAGTAGGATCTAGGGTATATGGAGCA
ATCCAGAGAAAGAGAGTGGTGCCCCCTCCTACCTGCAGGGGGATAGTTAT
CGAAATAGAAGCCTTTGGGATCGCCTCCGACTACGGTCGTAAGACTTAAT
TAACTAAAAACAGTgcagtctccataactcgagcacGTGCGGAGAACACA
AATTTCTTCGAGTTTAGGAAATTTCGGAGATATGAATTAAcgtttataag
gtattgttaactgaagggacgagaaaattTAATCAAGTTAACatagacat
tcgagttatagaggttcaagttaTGGAGGCATTCGAGTTATATAGGTTCG
AGTTTTTCTCACCTTcaattgagctagaatctgacaatgtgtGTCTGCCT
GTCTGTCTGCGTGTCACAAAAACTTCAGGCCAGCccggagacttcaaaaa
tggtcagatttggccgaaatttggcacacttgttccttgcgtgaatatct
gggggtgtttttttcatgtttgaaaaatttgattttttgagcctggggac
gagttttagcaccaaaacgaggctaaaactttcaGTTTTGTCAATCTTTT
TCACGCTTCAGGAGTACGGTGTAGCTAACCAAGAGCATCGTGCAGAGATC
AAGAAGCGTACCAAAGAATTCCGTCACCAGTTCGGTAAAGATACTATCAA
TGGTGGCAAAGGAAAATCCAAAGACCACAAAACTACCAAAGATAAGTTAC
AATTCTGGAAAGGTAAATACAAACCTCATTAAAATTCTTCCTGAGAAGTT
TGTATTCTCCAACAGGTGGTCTGGAGAGTGTACGAGGCTTTGGTTTTTGA
AAACCTAAGTATGGATACGAGACGTGATTCACCAGGCTGGACAACTGGAA
TGTCTTATAAAAGTCTTATGGAATACAGTGGATACGTGGATTCATGGCGG
AAAGTCTCCAATAAACGGTATATTTTGCAGAATTGCGAATGATAAAGTGG
GTGCAACAAACCCGCTTTTGCTCTTAGAGGAGGTTCAAAGAGATTTGGTT
aacaaaattttcttgaaattggaaAATGCATTTTCACGATGAATACATaa
tgtattttgaaatatttgatatcATCCTCGATTTAATGATTGAATCCATC
GATTGTAAACGATTATCGaacatttttgtattttctaaaaaacttcTCTT
TTCTAAATTATCTTCTAGCTATTGACAGTTGATCAGAATCTAACTGTCAA
CCTTCATCATAAAAAAAAcgtaatatttatttttgtacagaattttaaac
aagataaaaatattttttttcaatatctttttttcttttattcaaattaa
TCACCAGGggaatattattatttttagacCAAAGTTAATGTCATCACGTT
AATTAATTCATGTTAAGTCTACTTTAACCTTTAGAACTGAACCCCTAACC
CTAAATTTTGTATATTATTTGATTTATGGTAGTGTATGTATTGTTTGGCA
ATTAGTCAATAATGGTATCGGCTAGGATGGAAATTACAAGAAACTTCTTC
ACCAAATTGGTTAAATTGATACTGCTCCCTCTGATTGATggtacacgttt
tctttataaaaacatctaGCTTTTTGAAGGCTTGGGATATTCTTGACATT
TGaatttaagcttaaaaatgttcttaaatagtttgttcttatttggaaaa
aacgtgtatccgtTCGTAAGTATAGGGAGTATCGCCGTACCATCATGATT
tcctaacaccctgcctggacGTGCTTGGGACTTCACTCTATCAATTAACT
TAGATTAAAGCTCAAAATTGCAAATGTAGAATAGTGACCTCTAGAAATTT
GTCTCCGTGCGAGTGTTTGTAATGTAGAAATGATTTTTCATAATGTATTG
AACagatttgaaatttagaaatctAAACATAGATTCGTAGTTGTAATGTG
AAATCTTTGAAGTGAATAAACGGTTCTCCTTTGACTGAATCCTGACGAGC
TTGCTATAAGGGGTCTCTCGTACCATCTTCCCTAATTTTGACACATTGGT
GTCACTCCAATGAGTCAACAACCTTttgatttatttgttttttttaggta
aattttataagattttttgtttgttttgtatcttatcattttttataggc
cttattttttttttctcggaTAATTATGTTTTAGataattcttttttgtt
tgttttttgtattGTACAGAGGAATTATATCTTATTatactgacctttat
aaaccctggaccaagctatatctacAATCTTTGATCGGGGTTTTCAGAGA
TgcggtaccctaatggtagcactactccaTGTGGGTCATTTaataattca
atgaaattttccgTTTAAAATTTGTTCACCAACACTGaatagtgctacca
ttaggatACCACTTTCGAAAATatcca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058480TCONS_00058480Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058480-proteinTCONS_00058480-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:1009682..1020108 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.24	2.99	1.24	0.7	48.25	37.38	27.04	28.28	11.91	17.59	14.75	10.29	22.05	18.53	8.83	10.05	17.04	17.01	19.28	19.89	18.62	18.33	9.78	12.11	17.95	18.23	11.16	16.13	4.23	4.12