XLOC_036976 (gene) - C. hemisphaerica

Overview
NameXLOC_036976
Unique NameXLOC_036976
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_313:28743..36436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036976 ID=XLOC_036976|Name=XLOC_036976|organism=Clytia hemisphaerica|type=gene|length=7694bp|location=Sequence derived from alignment at scaffold_313:28743..36436+ (Clytia hemisphaerica)
ATTTACACTGCGAAGTGAAAAGACACTGCCTTCACTGTaagttttttctt
caatttttacttTACTTTGTCCATTCTCCTATATGTCACCATGTCACTGG
TCACGTCTGATTTAGCTTAGGGTTTTGAAGTCGCGaaattttaaaatgca
tttCTGAGTCTGACAAGGTCAACTATGGTCATTTTTACCACCATTCAAGG
TGGGTTCGATAGTTTCGATTAactcgattggtttgattgatatTTCAACA
TGGATTGAATATAAAATATTCGATATTGATCGAGAAGTGTTCAGAATCGG
TATTACATGAGTCGTTGAATATAAATTGGATGTCTTCGATTCATCTTCGA
TTGATCAAAAGCTAACTGAAAACAATACATTGATTCTACAAAACTGCAGA
TATTGTACAATCGCGGTAAAATTGCTAGAGGAGAcaagttgatttttcaa
ctAGTCCTGACCCCTCTCTGTTTGAGAAGATGTCTATGGGTGGTGGTCCG
GTGGTCTATTTGTCTAAGATTGgagatttggaaaaagtttaaattttgag
tCTTGATTATCGGAACTCAATCAGTCGGTACCGCTACATGAaaaaggcaa
ctattgccttaacgggaaatatttcccgaacggaaaggtgaaaataaccc
gCAAAGGAAACTttcaagattgaaaatttcctcACAATTTTCTGTTTCCC
GTTTTGGTCAAGAAATTTTCATcgttcccgaacgggaaatagaatttgtg
taaacaaagtagttttttgtttcccgatcgaAAAAAAGTTTCCGAATAGG
CagggaagtttttaattgggaatggggaaagtagaattaagaagcAAGTA
CTcggtggatttcttaactaGAACGAatactactctcgggtacttaataa
cCGTCCCCCCcgcgctaattaatttttcgaaaattttccacccaggacat
tcttattccaaccccccccgcttattaatttttggggaaatgtttttgaa
agttcccttttttgtcctaattcagctgtattagcctccttttcaaaaat
tttccacccaggacatttttattccacccccccgctttttaagttttgaa
tttttttccccccccccgctttttaagttttgaatttttttccccccccc
ccccccgcttattaatttttggggaaatgtttttgaaagatccctttttt
gtcctaattcagctgtattagcccccttttcaaaaattttcccccccgga
cattttttttcccccccccccccccgcttattaatttttggggaaatgtt
tttgaaagatcccttttttgtcctaattcagctgtattagcccccttttc
aaaaattttcccccccggacattttttttcccccccccccccccgcttat
taatttttggggaaatgtttttgaaagatcccttttttgtcctaattcag
ctgtattagcccccttttcaaaaattttcccccccggacattttttttcc
cccccccccccccccgcttattccaacccccccggctattaggtacccga
gagtatttatTTTCCCTCCTTTACAAAAGGGACAAGTTTTAAACTTTCCT
CAGGCATTTCCGGAGTGCTCAGAGGCCACTTTCCTGATCGGGAAACTGGT
GAATTTTCCGATTTGGAAAGTCTAGTCATTTCATTTTCCACCTTTCCGTT
CGGAAAATATTTCCAATgaaggcaatagttgccttttTCATGTAGTGGTC
CCAACTGTCAATGAAATGCTGTGGTTAACAAGTTCGAATAACTTAATATT
TGATCACaaagttttataaaaatatccGATCCTGCTTCTGCTCCAAAATA
TTAATAGCTGCTCTGATTTTTATcatattggaaaatttttgatggaAATG
CGATATTTTTGAATGAAGAAGCTGAAAGGACTAGATAATTGAAATAAGCC
CCTCGACAAGAATTATTTACACGGAATAAGAAAGTTTTCGAATTTCCATG
CAGTATGTTTTACTTCAAAAGGAAGTCGAGTCTTGAACTAGTCTAGATTT
GAGTAGAGTCTGGATTTATGTTGCAAAAAAGACTTAATGAATACGTGTGA
TGCCTTGAGTAATTGGAATCTTCTTGGACATTTGGGATAGAAGTAGCTTG
GATATACAGGTGGTAAACTATTTCACTGTCTAGATTTGGATATTTTATGT
TGTTGATTTACCGCCTGGTCTTCCTAAAGCGATGGCATCCTCAAATCAGA
ATGCAGTCTGCTCCCCTGCGCTCACACTTCGCTAAAGCCGACAAAAATAA
GGTAATTCTCCACTTGCTAGTGTAGATGAATAATATCACGGTGTTTCATG
CTGGTGCAATTTTCAGGCAAAGCAGTGTATTGCAGATTTTACTTTGATAC
ACATTCTGGATAAACTTTGATTGCACCAGCATGAAACATCGTAATTGTAA
GTGAGTTATTTCTTGAGATCGCGCTCgaatttttctcgaaatttatgGAG
GAGTACTCTCTAAGCAATCTTCAGGCAATGCAATGTattgtagattttat
tttaattgGTTATAAATTTGGTTGGCTaggaaatcttttgaaaacatGGG
TATGGACTTTCATTCTTTAGGGAGACCAGGCTATAATTTCAGAACTTTGT
ATCCATGTCGAggtaaagttttatttttctgaaaattaagcttggatatc
caggctaggatAAATTATTAATCTGGATAGGTGCCAATATTTTTATAATC
CAATTCAATGATAAAATAACTTCGCACTCAAAGTAAGTCCCAGACCTCTC
TGTGGCACTCGAGTGGAAATCCTTTGAAAATCCAAGTGCATTTCAAAAGT
TCTTAAGAACTGAGAATTTTGAAATACCATGTTTATGTCACACAACTCGA
GCAAAATTGACGAACCTGATCAAAATCAATATACgtctcttttgtttttc
tttctcttttataCCAAGAACAGAAAAGTCTGGTTCTGTCTcccactaca
cgtttttttataagaatgtccggaatttttaaagccttcggttgttttta
actttttgagtcttAAGCCTAtaagtgttcttattttcactgtTTTGTGA
AgaatctttgtacattttttaagaaattcatGTTTTAGAGAACGccaagc
ctcaaaatgttcttaacttgttcttaataatttAGTGTCCCTTTAGCTTT
CTAGCcttcgaagtcttatgttcttgcatagtttgttcttataaaaaaac
gtgtatggtgTTTAGTCAGCATAAATATCTTACTTAATAGACTGTTTGAC
GAAAATCATTCGTAGATTGAATTGTGAATCAGTTGTTCAAATAAACGAAA
CCTACTTAGCAAGGATGTGCTATGGATCTGACAAAATTGTGGAATTTTCT
TTCAAACTATTATTATTATGGTCGTTGACTAGTGATGATGATGgacaaaa
atctgattgaacTTTCAGTTTTAGTCACTTACTGACTGAAGCAATAAGCA
GTAAAGCAAATATGACAATGGTAACACCAGACTAGACTGGACTAGCAAAT
TGTGTTAATGTTTTACGACTACACTATAGTGTTGATTCTTTTGTCTGTCC
ATCATTCTACTGTatttaaaaactttaagaaTCTCTTCTCGAGCTCGAGA
TTGTCATTACTTCCGTTCAAGGGGGTGTCCTTAAAAAGCCAGATTTGGTG
TCACTTGGTGTCGGGGACAAGAGCATAAGAAGAATTTGGTTTTTAGTATT
GTATAAACTAACAGCTTGTTTAGGGAAAATTTGAGCACAAGGataatgtt
tttattaattaattaatgGTTGTAAAATTATCTGCAGTCGCACCTAGTTT
AGATATTTTGTTGTTATGCTACATCTTTTGATAACCAGATGTTATATTTC
CCTTGCCTTTGAACCTGTTCTTTTTACATAGGAATACGACCTTGACCCTT
TTTCAGCCTCCCTTATAGTACCTGCCCTAACATAGGTTTTTTCATAGtct
tttaaaaaggtttatacTTGAATGTTTTAAGCTTTTAAAATCTGCCTCGG
CGAATAAAGAGAATAATTttgctgaaagaaaaattaaagattttttatta
aagaaaattGGTACGAGGCTACCATACTTGCCTTACTCAGCTTATCATGG
CTTTCATTATTAATCTATTTGTAAAAGAAGTACAACCACTATTGCGGATT
TAGCATTACTTTTAGAATATGCAAAACGGAAAAAAGCAACGGAAATGTAT
agtgtgtccggaaaaaagcGGAAGGTACAGAATTTCTATAAAtagaaatc
ttcatttctatATTACGACATAATTGCTCAATTTTGTTCAAAAACCCATT
TTGATTACCTTTGGGAATTAAATATCTAATGATAGAACAAAGTAATTCCA
TTCTAGGGCGCCCCATTCTAATTTCTATGATGTTTAATACCATTGAGATG
GTTGAGATTTTACTCTAAATCTATTCCAATTTTTTCGGACACACGGACAC
ATTattatctatattataatacgcttaaatcggaactctcccattctcgc
atgaggctttttcgctagcgatttttaaatacacggcaatttttttcgcg
ccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCTTGATGGAGAA
ACACAACTGACTGTGCAATAGCACTATCagcataatttatagttttttaa
aaaaaagtttatgtcggttatgaaataattttgattcatatgggaatacg
tcgaagataaaatttgagttttcaaaaagacatcatTTTTATGATTACCC
TTGAGATTAATAAAGCTCCGATGACATTTCCCTTCTATTTGATACtctga
taaaaacatttcaatttaatgGACTTGACAATATGAGAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATACAAAtccctacaagtttctgaaaaatagaaaagcgagcgaag
cgagcgtattaaaaggagtaagaagtcgtctcggacgacgccgggacggc
tagtatAGTTTTATTTCGACTGATTAGATGTGTTGGTTTTTCTATTACTA
AGTGGAATATTTTACACTCGTTTACAGCCTACACCCTAACTTAAGAAGCA
CAAGTTGCTATTGCTAATGATTTTTCTAGAGCTATCTGAACAGGTTGCAA
ATAACAACAGGTTAAACATCGACACTTAAATGATAATTTGTCTTTCAGTT
AATCTGATCTGAAATGCAAAGTTTGTTATTGTGCGTAGGAATTTGAGCTG
CTTCCTTCAATACCGCCAAAAGAATTTATTTGCATGTTTTACATGGTTCT
GTAAATTTTCTAAGAACAAAAAAGAAGGCCGAAAATTTATAAGATGACGT
AAATTTCGATTGAATGTGAATTTATTTAGTTACTTTTAGTGGAAAAGTAa
ccctgtttgtttttttttattaaatttttcctTGTAacatctttcttttg
ttttgtttcctCATTTTTCCTTTAAGGAATCTTTTTCATTTACAGCtgaa
caattttcaattttatttgattttccaTCTTCCGCCCACATTCTTGTATC
CCGTCCTAATAATTCATCAAATTTTCCCCTTTTTAACCATGCATAACTCA
AAAGGTTTGAAATTTGATCAAACCTGGCCTCTATCTGTTAATTAATTCCA
AGCCTGCTTGAAATTGGATGTGCAATAAGCAAAGGCCCCTTATTCACACT
GTTTTATTGTTGGTCAAAGTTTCTTGGTTgtcaataaattattttttttt
ggcaaaattcaaTCAGAGGGAGAACTAGTTAACAATTTTTATAGGGCCTT
TATAACGAAAGAGTATATTGTTAACTGGTCGCTAAAGAACttgtttattg
ttttttatattagatttaaaaatcaataaaacgaTATTGGGAAAAAATTA
TTCGTTCATAGAGTTGTGTTATAGTTTGTTGGTAACCTAGAGTTTGAGCA
AAAGATTCTACTGTCATTCTTTTGCACCATACTTTTCACACCTTTTAAAG
AAGGTTACACCTTGAACCAGAAGAATTGCATTTATTGGTGTTGGCAGTTT
CACCttattcaagtttaaaaaataaCGAAATCATCTTCATATCTATTCAG
CTCAACTCAGAAAATGGTAAGCAGTGCAGAAACAGTGCCAGAGTCATGGG
TTTATTTATGGATCTTGTTTTTCATTGAAGCGTGCATTCTGATTATCGCC
AACATCATTGCTTCGACAGTCATCTTATCTTCAAAGCATTTACGATCGAT
ATTTAACTACATTCTATTATGTTTATTATTTATCACGCACGTTTTCACGG
GCCTCTTCATCGTCATCCGTGTCGCATTATTGCTCTGGATCAAATCGGAC
ACCACCAGTGCTTTAGAATACGTCACGTTGCTACGGGATACAGCAACAAG
CCTCGAAGTACATTTAACCATTTTAATTTCAGTGGAAAGATTTATAGCCA
TACGTAAGCCATTCCTCTACgctaaaatgacaaaaatacaTGCTGCCATA
GGTATTGGTATCGCTTTTGCTTTGACTATTGTTTTTTCAATCAATCGTAT
TTTTTGGTCCGCTTATTTCATTCCAGCTTTTGTTGTAACTTTCACAGGGG
GCCTGGTCACCACAATATCTAATTACATTTTATACCGATCAGTTAAAAGA
CAATGCATGGAGATAGCAGCTACTATTGTTGATCGATCTggtgaaaaaca
aaagaaaagacgAGAACTTATGAAGAAGCGGCAGTTAAGATCACTGAAGA
TTTGTATTTGGATCGCAGCCTCCTATATCTTGACTTGGTTCTTATTAATC
GGTGGCGCGACTGTCCAACAACAAGTCAAATCTATGAGTAGTAACTATTT
GATTTTGTTCGCTTTGGTTGGTTATTCGAATGGTCTATGGGACGTCATTA
TATTTTTCCATTGGAATAATACGGCTAAAAGACAGTTCCGCAAGCTCATT
CATGTTTCAAAAGCGGGCNATTATATTTTTCCATTGGAATAATACAGCTA
AAAGACAGTTCCGCAAGCTCATTCATGTTTCAAAAGCGGGCGAAATTGAC
GTCAGTGAAACAGAAGGGTGCAAATCTGCCGTCACCGAAAATATGACAAC
CAATTTAAGACAGTTGTCAACTAAACTCCAAAACTGATGATGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058687TCONS_00058687Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058687-proteinTCONS_00058687-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_313supercontigscaffold_313:28743..36436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.17	0	0	0	0	0.34	0	0	0.01	0	0	1.18	1.41	0	0.65	0	0.01	0.27	0	0	0	0	0