XLOC_037072 (gene) - C. hemisphaerica

Overview
NameXLOC_037072
Unique NameXLOC_037072
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_314:489977..496887+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037072 ID=XLOC_037072|Name=XLOC_037072|organism=Clytia hemisphaerica|type=gene|length=6911bp|location=Sequence derived from alignment at scaffold_314:489977..496887+ (Clytia hemisphaerica)
ATTTTCATATCTATCGTTGTTATTTCTTCAATTCATAGTGAATTACAGGG ATAACAACCTCATTGAACTAATCTGCAGGCTCAATgagtatttttagttt ttatttctttttgcaGGTTCAAGGGAGCACTTTTATTTTCgaccattgtt ttgattggaactGGTTACTTCTTCATTAAACATGTTTTATCCAGCAAAGA GAAGAAAATCTTTCTTATTGTCATTCCATTGCAAGTACGttgttagattt ttttcaaattgaaaatcgaAACAATTTCTTAAGTGAAGGTACATTTACAC TCACCCACACACACACAAATGAATTCACGCGAGATTTTACAAAAAGCCGA CGCCGAACTTTTTCTCACAATTCAGGAATGTTTTCAGATCAATTTTTGTG ATCTTCATTATATGTGTGAAGTCAATAAATGAATTCATGTTCTTATCCTA CTGAAATATGACAATAATAAATGATAATAAGAAATAACGAGATTCCTGTC TTTGTCAGATCATCTTGAACGTGACACAAACGATCATGGACTCCACCGAA GAAGGAAGTGCCATGTATAATTACTATATATCCTTTTCAACTGCCTAACT GTTTTCTCTGGTGCCGTGAAATAAACGTTTTCTAAAACTTTGGATTGTGT TTCGGTTATATCGCAATGCTTTGTATCAAAGGAACTTTTAATACGGTGAA AAATCTATTAAGCTCTGTAAAATCTATCAAGCTTTGTAAAATCTATCAAG CTTTGTAAAATATCCAAAAAGGGGAGGTGGGCATTTTTAAAAACTGACTA GAGGGGAATGCCAGTGAGGGCGAATTTGTTCGAAATCTCAAGTAGGCAGC AAACCTTTTTACgatcaatgtttttttccttGACGGACAAAATATACTTC AAAATTGTGTTAGCTGTCGATTTACTTTGTTGTGGAGCAATACTATTGCC AGTCATTTGGTAAGAACTTTCtcattacttttttttcaaagcaatttCAG TTTTAAAAGTACTTCTGTCTCATAGATTTCCGTCTTGAATTGAAGGCACT TTTCCATNCTTTCtcattacttttttttcaaagcaatttCAGTTTTAAAA GTACTTCTGTCTCATAGATTTCCGTCTTGAATTGAAGGCACTTTTCCATC TCGAAATTatgcataattcaccaaaattccAAGAATGCGTGCTAATTTGA TTTGCAAAATCCCTTTTTCGTCTCATACGAAAAAACTTGCTTTGACAACT GAATAATAAATGATTATATCAGAGTGACAACAACCGAAGAACAGTTTTAC CAGAGGATCTGCACTCTCAAGTGACTTATCCCCGTTAAATATTAGAACTG TTGTGTCGATCGATGTGCTTTCTATTTTGCAGGTCAATAAAACATTTATC TGAAGCTGCAAAGACTGACGGAAAAGGTAAAGACAAGAACAGGAGCTAAT TATACTTTTCAGAAAATTGTAGACCAATAGCTTTATTAATACTTTAACTA ACGCTCTAGCCAAagacaatgaaaaatattttcttttctcttaTAGCGGC GATCAGTTTACAGAAGTTGAAACTTTTCAGACAGTTTTACATCATGGTAT GAATGCATTTAGAAATTGATTCCTTAGCCCTTATTTCTCTCCAAAAGTGG TTGTTCTCCAATCAAACAATTCGCTGTTGACGTATGCCTTCTCAGGATTG GTTGATTTCTATCTCGggtggggtacttaggcaaaatgggtgtcaggtat gtgcgagccataagggtaccttttctcattcctcaaaagtctctcaaagg ggtacaaattcaaaagttagtctctgaaagggtcccaaaatcacgaaaat caaaaatttctctctcagaGGGTcatgatttccaaaaattttgaccaaat attGGTAAAACTCAAaccaagatttgaaaaaaatggaccaaaatttagga aaaagtctctcaaagggtcccaaaatcaccagaattttgtctctcaaagg gtcgattttcgattttcggctcggacatacccgtcacctcgcaaacctag tacccccccccggatttCTATACACTTCAAAACAGAAATTTCTCTTTCCT TGTATTTTCTTCCGAATTTTCTTTAGATCGTTTGTTACATCTATACCACG AGAATCATAGTGAGGCTGATTAAGGTATATATAAACCAGTTGGATTTTCC ATTAGGCCTTGATTATTTACGAATAAAAGCAAGTCCGGAAAAAGCCAAGA TTTTGATTTATTCATCTTTTGCTTTGAATATCTTGGCTTGATGAATTTGC TCGGACTTGCTTTTATTCTTTATTAGTCTAAATTATCAGTTGGTTAtgta ttttgatcattttccaAATACACTCCTTTTTGGACATAcccggaggtcct ataaattaactgatgttcgtccgttcgtccgttcgttagttaccaacttt tctcgagattggatcattagtttttcctgatttttggcacaaagatgcaa aatggtaatgcccaaaatgtgacggagcccgattttcgaaaaaaattcat ttccggccgaaaatgccggaaatatgccggaaaaccgtttttttggcatt ttgtcaagatttcatcattagttttttctgattttttgcgcaaagatgcg tattagcaatgcccaaaacttggccgagtccgattttagagaaaaaatct tttccggtcgaatatgccggaaatcgccgtttttgcagattttcatcgga ctttttttttatatttcgttgttttttcacacaaaaacattattaatagt aatgtccacgatcaagcatggttcaattgttaataaaactgatttttgaa gccggagttttctaaaaatcgccggaatagccgattttcgccgaaaaaac ggtatttcttgaatttcttgagctgtactttatatttttttatgaaattt tgcacactgatgcaaaatttcaatacctaaattgtgacggagcccgattt tcgaaaaagtttcatttccggccgaaaatgccggaattatgccggaaaaa ctggttttttggcattttctcgagactttatcattagttttttctgattt tttgctcaaagatgcgtattaacaatgcccaaaacatggccgagtccgat ttttgagaaaaattttttccggtggaaaatgcctgaaatatgccggaaat cgccgtttttctagattttctttGGACTTTTCCCttttaattggttgttt tttcatttcaaaaacattattaatagcaatgcccaccatcaagcatgttt caattttcaataaaattttaaaacctattttcgccggaaagacagtattt cttgaatttcccgagctgtactttatatttttttatgaaattttgcacac tgatgcaatatgacaataccgaaaatatgacggagcctgattttcgaaaa acatttttttccggccgaaaaaaccggttttttgacattttctcgaattt tcatttttagttttctctgattttttgcagaaagatgcgtattcaaaatg ctcaaaacatggccgagttcgatttttgagaaaaaatttatcctgTTGAA AATGCCGAAAGTcgtcgtttttgcagattttcattggactttttccttat atttctatgtttttcacacaaaaacattattgacaacaatgctcaccatc aagcatgatccaattgtcaataaaactgcataactataaaccctcgaatg tgacggagcccgattttcgaaaaaacaaatttaggggtaaatttcagcta aaaaacggctaaaaaaagggttttttggactttgtgaaatattggatcat tgttttttctgactttttgcatgaaagtaggtaaaagatggctcaaacag atttttgtaaaaaaataatttttcagctcaaaaaacgcatctttatctat atctttatctttatctataagcatacatcaatgttcttgaaattactgaa ttttttgatgagatatgtttttttgctctcgaagtcttgaatatgaaaga atatttcaagagcatgaaattttggtttctaaacgttttttataagaaac aaacgactaattttaatagatcgtcactatttgtgttctgaatgattgtt tcatggtcacgcttatgtagatatcaattatatatgtgttaaatgcataa ccaggtaggtccataaaagtatcacttgttttaaaTCATTTTGGGCCTCG GTCTTAGTAATTAGCACTCCAAGCGACATTTGTATTCCCAAAAAACATTG ATCGATTTTGATGTAAAAGGCCAAACGGTCATCATATGTCTTACGTTCAA GTGTCTTGGAACACTACTTTGAAAGCGAGGCTCTCAATGATTCTatgtat ttcaaaaataatgtaTCAAAGAATTGGCGTACTTCTACGAAGTGTTTCTC CTCTAATTCCTCACTTAGAATTATCTGTTCCTTTCCTTTCAGTTGACGAT ACCGTTTCAACTCGTCTGGGTGTCAGAGGTAAATAAATGATTCTAATGTA CAGTAATTAAGTATTTAGCAGTAAGTAAGTTTGCTACCGCAGTCGAGGGT GACCcaaaggctcccttttctctagctgtctatccgaaggtaggggaggg cgccactcctttggatttctccacttacccctgatccgtctctttaatta ctgagcatcaagcagagaatcatcaagtaccatttttagaaactttggta tgacccggctggggatcgaacccacaaccttgcgcaccgtagctggatgc tctatcTTCATGTTACGGCCGCTTAGTATTTAGTGTGGTTCAAATGGTTC GATAATTTGATTGACAATCTAATATTTTAATTCTATAAACCCTTCAAGAT TTTGAACGtgactgttttttttctttcttcttcttaaTAAAGTTCCTCTT ACTTCATTAGCTGTTCACAGAGTTGGCTACATACTTCTTCTACGTGTGGA CAGGGTGAGTATGTATGTAATAGTGACATCAGAGACCATATAAAAGCTAT TTTAActatttcattacttttttgtaCCAACTTTATTTGCCAACTTGAAA TATTgaagctattcatgatatgcaccattgcaatgtcttccgttccaccc aatagctgattggttgaaagtgacgtattgactgcttttacgtcacttcc aaccaatgagctattggttccatgacgtaatgtcagaagacattgcagtg gtgcatatcatgaatattctatAAACGTGAATACGATTTAAGAAATATGA AAGCCGTCGAAAATGtgtagaatttcaaaaagagcTACATTTCTTACGTC GTACGTACTGAGAACAATGATTTCAGAACATGATGCTTTGTTCGTTAAAT GGTTGAAATTTCGTGCATTTTCCACACGAACATTTAATGGCATATTAACT ATGTACCACCGGATACTAATTTGATATagataatttttgttgtttgctCT TAACAGGTTGAAATTTCGTCCAGTGAACGACAACCCATATCTTCATCTTC CACAAGCAGAAGACGACGGAGAAGAAGATATTGAAATGAACCAAATGTAA GAATGTTAAAAACTTAATTTAGCAAGAATTTCGCTTGGTGCTTTTACGTT GAACTCTTTCCAAAAGTTCAGATTGTCTCTCCCAACAGTCTTTCCACGAA TTATATTGGTAAGGTGtacaacataaaaggggttgttCAGATCGTCATCT CCTACTGTAGTCTATCTATGAATCCTCTTAGTCCGGAGGTGGCTTTTGTT GACCCTAAAAAGTAAAAtgtatgggtttttattttattttcttattataT GGTCCCTCTggactttaaaagtttttgccAAGCTTGCAAAGCTGAGAAAA TTTTCTATAAAGCATTGAAGGGGGTAAGGTAAATTTGGCCTAGTGACCCT CggaaagtcaatttttgaagttaaaaaattCAACTTATTTCTTTTAATCA AAAGACACATGTGactcttgtttttatttttccagatCAACTTATTCTGG ATTCAATGAAGGTCTAACGCGAGTCAACAGGGCTGATGTCAAAACGTGAC CGCTTGTATAATTAACATTGTGGTCAAGAAATACAATTTGAAATCCCTCT TCATTTGTTATTAGATGCAAAGGAGAGCTCGGCGTTCCGAGTGGTTCAGT TCTTTGGAATAGTAGAAGGTACTTACAATAACCTAACATTGGAAGGTTTT AAATGGAGAGATCATTGTTTGTTGTGCCAAGNGGAATAGTAGAAGGTACT CACAACCTAACATTGGAAGGTTTTAAATGGAAAGCTCATATTTGTTGTGC CAAGACAAGCCATTATGGTACTGTAATAGTAtacaaataataaataaatg atgttagaaatttttattaataCAGACTATtagttttgttgatattttat ttttgttgttcggattttgattttgaggtATTCTATTTATTAATGTTTCA TAATCAACAATACTTACAAAATTACAAGACCTTTTGAGATGTGTTCATGA CGGGTCAGATGTACTATttgtgaaaataaaattgaacatCCAGTATTTTC ATATTCTTTATCTTtcataacgtcaattttattagaCCTGTACGAGATTA GGCCAAAACtaataacaggttaacaactcaAAAAATGTCCATTTTAGGCA CTATAGGTAAAAAGTATACGTATTAACAATGGAAACtctaaaacctgaaa attttaaaagatcaAGGCTTGGGATCAGCACGTTTACTGACTCATTTAAA AGTCTATAAAAGCAGTTTCAGGTATTCTAaataatattttatattttatt atagTTTGTTATAAATATTTAGTTGTCATATAGAGACAAAAAGATTTTGC ATTAATGTGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058845TCONS_00058845Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058845-proteinTCONS_00058845-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:489977..496887 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.78 28.12 30.14 23.2 20.82 16.19 23.85 22.98 21.13 17.72 24.34 18.88 16.64 14.16 14.22 14.82 20.95 20.71 11.78 16.31 21.84 21.97 31.77 31.2 19.05 23.77 18.1 13.11 27.38 25.54