XLOC_037152 (gene) - C. hemisphaerica

Overview
NameXLOC_037152
Unique NameXLOC_037152
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_315:59241..68495-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037152 ID=XLOC_037152|Name=XLOC_037152|organism=Clytia hemisphaerica|type=gene|length=9255bp|location=Sequence derived from alignment at scaffold_315:59241..68495- (Clytia hemisphaerica)
CGCAGTTTTTGAGTAAGCACAGCAAAAGACTTAAAGAAAGGAAAATGAAA
TGGCTGGAGCATCGTTTGAATCTTGAAATGAAAATGATCTTTTGGAAAGC
TGACTTTTAGATAATTTTAGAGCATGGTTGCAAAAGTGTAAGTTTATTAT
TAATCATGTTGATGTTTTCCCAGTCAGCAGTGTTCAGCTAACAAGAAATG
AAATCTGCTGTTTGCCATAACTTTCAAGGTTAGCCAGATTTTTTTCTGTA
TAAGAATACCAGGTAGAGGAAGCATGGATGCAGGCCAAGTTTTCTATTCA
CTAAATTGAGATGTCAAAACATCAAGAGTGTTAAAGAATCCTCTAATAAG
AATCATCTAGCTAATGTTATTATCCCTGTTTTAATTTCCTCATTTTACAT
TGTGCATTCATCTTAAACATTGCTTGGTTGAATTGATTTAGTTCAATGAC
TGTTTTTTGTTCGATGAAGTTTGATTGGTTTGATTGCCGACTGACAGGGT
GTGTTTTTCTGTGAAAAAAGTGATCATACTGTCATATGAATGGGGCTAAA
AATACCTAAATTTTTTCAAAACTTTATAATTTGTCCACATATTTTTCCCA
ACATTTCCAAAAAAGGAGAGATTGATTTTTCTAATTTACCAGGCGATGTC
AAACGAACGTTATCGAGCTGATTTTCGTATTTGAACCATCAAACTTAATC
AAACAGAATCAAACGATAGGTGTTTGACTACCCCAGACGGTCGTAATCGA
TAAAATCGACCATCGATTGCAATCGATAGATAATGGATATTAATCGATCA
ATTAGTTATCGATTAAAATCGATAATCGATAGCTAATCGATTACTAATCG
ATCGCATTGATTAGTTCGATAGCTAAGGGGTCAGTCACAAATCGATTCTA
GGTTAGAAGAACGTCAATTGACGTTTTAAAAGCNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
GATGCTGGTTTCTTTTTCTTTTTATCATTTGTTTTTGCTCCCTTTAGTTA
GAGCTTTAACACAATCATGTTTGTTAAAGATTTTTCAAAAGTTTTTTTTA
CATAAATAAGTGTTCCCCAGTGGGCACTGAAAGTCTTAAAGACGTCTTCG
TGACGTCCTAATCAAGTCCCCAGGTCCCCGTCCTGAAATCTGAATAAAAG
GTCGTCCAGCAGACGTCATTTTCGGACCTAAAATCCAACAAGTCCCGATG
ACGTCTCCCGGACGTCTTCTAGTCAATGTATAGAGGACCAAAAAATAGAG
CTGCGACTGCGCCGCTGAGATGTCCGGACTGAGATAATAATTCCGGGGGT
TATTTTTTAAATGGTAAAGGTATTAGTATGGATAAAGGTTAAAATATGAT
ATAAGATTGGAAGATATTAATGTTGATATTAGTTTTTAGCTTTTTGAAAT
ATTGAAGCCAATTACTTGTTTTCAATTTCTTAATATTCTACGTTGATGAA
AAATAAAAGATTTTCCATCTTTTACCCCCTGGTTGTTTTTCGAAATGCGC
GCGCATACCATTAATTTGTGTCTAGCGCAGTTTTTGAGTAAGCACAGCAA
AAGACTTAAAGAAAGGAAAATGAAATGGCTGGAGCATCGTTTGAATCTTG
AAATGAAAATGATCTTTTGGAAAGCTGACTTTTAGATAATTTTAGAGCAT
GGTTGCAAAAGTGTAAGTTTATTATTAATCATGTTGATGTTTTCCCAGTC
AGCAGTGTTCAGCTAACAAGAAATGAAATCTGCTGTTTGCCATAACTTTC
AAGGTTAGCCAGATTTTTTTCTGTATAAGAATACCAGGTAGAGGAAGCAT
GGATGCAGGCCAAGTTTTCTATTCACTAAATTGAGATGTCAAAACATCAA
GAGTGTTAAAGAATCCTCTAATAAGAATCATCTAGCTAATGTTATTATCC
CTGTTTTAATTTCCTCATTTTACATTGTGCATTCATCTTAAACATTGCTT
GGTTGAATTGATTTAGTTCAATGACTGTTTTTTGTTCGATGAAGTTTGAT
TGGTTTGATTGCCGACTGACAGGGTGTGTTTTTCTGTGAAAAAAGTGATC
ATACTGTCATATGAATGGGGCTAAAAATACCTAAATTTTTTCAAAACTTT
ATAATTTGTCCACATATTTTTCCCAACATTTCCAAAAAAGGAGAGATTGA
TTTTTCTAATTTACCAGGCGATGTCAAACGAACGTTATCGAGCTGATTTT
CGTATTTGAACCATCAAACTTAATCAAACAGAATCAAACGATAGGTGTTT
GACTACCCCAGACGGTCGTAATCGATAAAATCGACCATCGATTGCAATCG
ATAGATAATGGATATTAATCGATCAATTAGTTATCGATTAAAATCGATAA
TCGATAGCTAATCGATTACTAATCGATCGCATTGATTAGTTCGATAGCTA
AGGGGTCAGTCACAAATCGATTCTAGGTTAGAAGAACGTCAATTGACGTT
TTAAAAGCTGACCCACCCACCCACACCCAAAAACGTCAAACACCTTGATA
TCCCCGAAAATCGATAAAAACTGCCTTCATTGCCGTTTCGTCAGCCATCT
TGATTTTCACTACGGCTCCCATAGTTTATATTTGAAAAAAAAAAGAAACG
GAGATAATTTCTAAACTTGTTCACAAAATTCCCGTAATGAATTATCTCCG
TAGTATGTAGCGACAGAAAGAACGGCCATCTGCAAAAATTCAAGGGCCGT
TCGGGCCGTCAAACAAAGAAAAGACCGGGCCGTTTGTTTTGGTTTTCAAA
ACGAAGCGATCAAACAGAAACATGGCGAGAAGTAATATTTGGCATGGAAT
GAAAAATCGATGTTTCTGAAAAACGTCAACAACCTTTAACCCACCCACCC
ATATACGTCAATTGACGTTCTTCTAACTTAAAATCGATTTGTGACTGACC
CCTAATTGACGCTCAAAAAATTGTGAATATCGATTAATAATCGATAACCA
ATTGATCGATTAATATCGATTGTAATCGATCGATTTTATTAATTACAACC
GTCTTAACTATCGTGCCAAACCCAATCAACGAATCAAACATCTATCAAAC
ATTATGAAAATTTCTTGATTAGTTAGATTCGATGACCTTCGATAACCTTC
GATAGAGTTTGACAGGAACAAACGTCATTTTGAGCGGCCGTCTGCCAATA
CGCCCAGGCGTAATCTATCGAATTTTGCGATTATCGAATTAAGCGAAGCC
ATTATATTTCGATTAATCAAAATAATCAAAGCCTAATCGAATTAATTGAG
ATAAAAAAATCTTGGAAAATTCGATCAATTCGATAAGTTTGATTGGGCTT
CGATTTGCCTTGATAGCTTCGATTAGTTTCAATTTTCCAATTTTCTTTAT
TGCATTTCTTGTTCAATGGATATTGGTGTGAAGGAACTTTCACGAAGTCT
TAAGTGACGGCTTAAAATTCATTGTCGAGCTAATCGCACCACACTTTTTC
AATAAAATGACGTTAACTGAACTTCAAAAAAGTCTAACTGTTGTCCAACT
TCTCAGCGAATCACGTGCACTTTTTTCAATGACTTTTTCTGGCCTGTTTC
TTTGTTTTTATTCTCATAACAGATCATGCACATTAATCGAAGGTATAGAA
CACTTATCAAAGCTTATCAAAGATTATCAAATCTTAATCGAAACTTATCG
AACATTAATCGAACTAATTGAGAAAAACCTGGGAAAATTCGATTATAGCT
CGATAGTTTAGATTAATCAAAGCCTAATGGAAGTATTAATTTTGATTAGT
TTCGATAAATTCAATTAAAAATCGAATTCAATTTTGTTCGATAGATTACG
CCTGGATACACCCAAACGATCTCAATCAAACAGAATCGTCGAATAACCAA
ATCGAATGCAATCGACCGATTGAAATTCAATTGTCAAACACAATCGAATC
TCGACATCAAAATTCTGGGTAATACACGTTTTTTATAAGCATAATGCTTA
TAAGCATATCCAGAGAGACAATTCAATTTTGCAATGTTAGAGCATTTTTA
CTAAAATAATGGTAATATATCAGGGGTCGGAAAAAATAAACCAACAGGGT
AAAAGACTTACGTCATTACATAAGCATAGCATAAGCATATTTGAGGCTCA
AAAATAGAATTTTGCTAAGCATAATGAGGCGGAGAAAAAAAACCCCTATG
CCTATAAAAAAAACGTGTATTCAATTGGTTCGATTGTTGCTCAACTGCAT
TCCATTGTCGTTCGACTGCATTCGGTATGTTTGGAAGAAAATTTTTACAT
CAGTTGTTGCTAAATAAGGCAAGTCCAATTAAACATTTACAAACCCAATC
GAACGCATTCAAACACAATCCAAATGCAGTCAAATCCTAATTTATTGGAA
TATAAATAAGAAAATCTATAAATTGAACTAATCAAACCCAAATCGAACTT
GATCAATCTCATTCGAACTGATCGAACTTAATCGGCATTTGGTCGTTAAG
GGGGTGGGGTCCAGCTACATGCCGATAAAAAAACAAGTATTAGACAAAAA
TCTGTTTAGGCAATTTCTTCCCGATTCCGTCCACAAACTCCACTGAAAGT
GAAAGCATACAATTTTGCTTGCTTTCACCTTTGCACACTGCTGCATGTTT
TATGTTATGCATGTTTTTTATGTTTATTGCAGTTATAATATTGATGTGTT
TATCTTTTTTCAAATTTAAATACCATATAGTTCATTGAAAATGGGACCTT
TTTTTTTTTGGGATGGATAGAAAGAAGAGAAAACAAAGGTAAGTTCTCTC
TTCTTATTTTTATGAGTAAAAAATGTCAATTGTAGTTCAGACAAACTGGA
TAGGGAATTTTGATTTGGTAGCAGCCAAATTTGAAATTTTGCAACTTTTG
ACCCATTGAAATTTTTCATTTTTGTGTATTTGTTTTTTGTCAAATTTGAC
TGAAAAACTCCAAATTAAAGTACCAGCAAAAATCATTACCATTAGGTATA
TACAGGATTTACCTTAAGGGAACTTATTTTGGTGGGAACTAATTTTGGTG
AAATTGGCAAGCAAACTCAAAATTCACCAAATTTAGTTCCCACCAACAAA
ATTGATTTTCTAGGTCATTCGCCCATATTAAATTTGTTGCTCACTCGCCA
AAATAACTTCTCACCAAAATTATTTTTTTGGTGTTTTGCCAGGTTTTGCT
TTGAATTCAACAAAATTGCTCCAAATAAGGCAAAATAGAACATATTGAAG
CTGTCATTCGCCAAAATTAGTACCCACCAAAATTAAAAAATTTCTGACGT
TCATCAAAATTAGTTCTCACCAAGAAAAGTTCCCTTAAGATACTTTCATT
TTAGGCTGCTTAAGTCTTGGAGAGCAAGAAGAAAGAAAGTTATATCTGCT
TCATCTCGGTGTAACCAAGGGAGTTCTTCATCGAGCGATTTTGATCCAGA
ACCGGAAGGAACTGCTGACAATGCTGCTAATCATATATCACCAGAAAACG
AGGGTCATACAAGTTCTGAAGAAGTTGAAGTTGGGTCACCTAGTGTTTTT
GAAGACATAGATCATGTTGATGAGGCTGTTGTTGCTTCTGCTGAAAATTT
TTTGCCTGGCGACATTGTTATTTCTAATGATGAAAACGATTCTTCACCAG
CTGAATCTCCTGATTCGTTTTCATCACAATCTGATACTGACTGTTTGAAA
GATGAAATTGACCATGTTCTTTGTGATAAATTGAAAACTTGGGCGCTAGA
TAACCATTGCACAAGAACATCAATCAACCAAATATTGACCATTATTCGTG
ACTTGGGTTGTAATTTACCAAAAGATTCAAGAACGTTACTCAATACTCAA
AGAAGTGTTGAACTGAGGCAAATGGGACTAGGATATTATATCTATATTGG
CGTGGAGAATCGAATCAGAAAACTTCTTGCTCTGAACGACAATTTGAATA
CCATTGTTTTAATGATAAATATAGATGGTCTGCCCCTATTCAAGTCAAGT
CCCATCAACCTTTGGCCCATATTGATTCAATTCCACCGTTTTAAACCAAT
ATCTGTTGCTTACTTTTGTGGAACATCAAAGCCCCCATTTGAAGAATTTC
TTAAAGACTTTGTCATTGAAATGAATTTTCTGCTTCATAATGGTATAAAT
TTTAATCATGTTCATCATCCAGTTACAATATTTTGTTTTACTTGTGATTC
GCCTGCACGCTCAGGACTAAAAGGAGTTGTCCAACATACAGGCTATTATG
CCTGCGAACGCTGTGATTTGAAAGGGAAATATGTGAGACATAGAATTGTG
TATGACCAGGATGCTCCCAAAGGTGTTGCACGTACTGATCAAGTTTTCCG
AACAGATGGCTATGGTGAACCAGATGAAGAAGGAAAACGTCATCAACTAG
AAGAGTCGGGACTTACTCCACTGCTTATTGATCTGATTAAAGATGTTGCA
ATTGATCCCATGCACCTGGTTTATCTGGGTGTGACCAGACGTCTTCTCTA
TTACATGAAAGGATTTTATAAGAATATCAGAAATGGGAAATTATCATCTG
CTTACTTAAATGCTATTACAATTGAGTTGAGTACTCTAAAATTACCAGCA
GAATTTGCCAGACAGCCTAGAGGTCTTTCAGAATTGGATCGCTGGAAGGC
TACAGAATTTAAATCATTTCTCTTGTACACTGGCATTACCATCTTGCGAA
GGTATTTATCCCCAGCTGTTTGGACACATTTCATGAGCTTTTCTATTGCT
ATTAGACTGTTGAGTGAAGAGAATGACACTATAAGAAACTCAAATCTATT
AGTTGCAGAAAACCTGTTAAAAGACTTCATCACAAGTTCTCACAATTTCT
ATGGAGAAACATTTTGTGTATATAATGTTCACAACCTAATACACCTAGTT
GAAGATGTTGCCTATTTCCAGCTTCCACTTATTAGATATTCCTGCTTCCA
GTTTGAGAATCACCTACAGAAAATCAAGAGTCTGGTCAGGGGTAGGAACA
ATCCTCTGGCTCAAATTGTGAAAAGAACAGACGAATTGGATGGTAGCTAT
TATTTAAACGTTCCACTGACTGTAAAAGTCAAATCTGATCAAAAGAATTC
ATTTTTTCTTAACAGTACATATCTCTTCATCATTCGAAAGTTGGAAAATG
ATGGCTCTGTTTTATGTGATACTTTTCCTGTAAACACTTTGCAGTCTTTT
TTTAATGTTTCCAATGTTGACTCAAAAGTTTTGGGCATTTATGTTTTAAA
ACGCACATTTCAAGCAACACTTGGTAAGTTCTTGAAAGAAGATTTATCCA
AAAAATGTGTTTGTTTACCATGTGGAAACGATTTTATTATTATTCCTTTA
TTGTGATTTTTAATCTGAAGATTCCTATACTAATAATTAAAATACAATAC
ACTTTTTCCAAATGATTCTTTTTGTACTTATTAATAAGGATACGCAACGA
TCTTTTGGAAAAATTTGAGAAAATAAATATGAAAGATTTTTTTTGATTGA
ATCGAGATGCCAAATCTAATGCTCTTCCAAATTATATATTGGTAATTGTT
AACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058992TCONS_00058992Clytia hemisphaericatranscript
TCONS_00058991TCONS_00058991Clytia hemisphaericatranscript
TCONS_00058990TCONS_00058990Clytia hemisphaericatranscript
TCONS_00058989TCONS_00058989Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058989-proteinTCONS_00058989-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_315supercontigscaffold_315:59241..68495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35	0.5	1.17	1.43	19.2	13.27	12.32	14.54	7.25	7.66	6.85	5.31	2.6	2.16	0.31	0.4	0.31	0.38	0.24	0.44	0.52	0.32	0.12	0.19	3.67	5.22	0.44	0.18	0.44	0.28