XLOC_037359 (gene) - C. hemisphaerica

Overview
NameXLOC_037359
Unique NameXLOC_037359
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_326:326267..332068+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037359 ID=XLOC_037359|Name=XLOC_037359|organism=Clytia hemisphaerica|type=gene|length=5802bp|location=Sequence derived from alignment at scaffold_326:326267..332068+ (Clytia hemisphaerica)
tctttacattcctctgagaTATGGCAGAATTAGAAAAATCTTCAGACCGA AGCTTGAAAAACTGACAAGTTGTtacaattttatcattttttgtgtCATT GAACTAAATTCAAATTCACTATAATTCTTTTAATTCAAAACATACATCAT AATAACTTACAAACATTGGCAAAtcactgttacaatgaaaaggTTGAAGG AAATAGTCATTATTTATGCaatgttacatttttatcaatatcttGAATTC TACCTATGTTACGCACTGGCCTGAAGACATTGGGACTACCTAAATAGGTA ATTCTAACCAATTAAGTGAGTTATTAGCGATTAACTAACTTATTACTACA CAAATGAGATAAAATAGtaacaatgttatttttttatcatttctctGTAC TGAatgcaaattttgatattttgacaaAGCCGTATCATTTTAAATATTGC AGTGGgtcttttctgaaaatttcagatcccAATGTTGAGAAATGTcaatt ttatagcaaaaaatcgattttagtgAATTTTGAGATGTCCAATGCATTGC CTCAGATTTTTGAACATGTTCCTAAGAGTCTATCTCTCAATACAAAGACC TAATTTTGGGCTGCACGtatctggaatagttccagagttttcgaccaggt tagaattcattctaattacagagcagaacttgtgacatcgcaaacaaaat tatattgcatctttgtgcaatattgagaaagaaaattgaagatcggaata atAGTACAGCATATATATAGCTACGTCGTTGAATGTAAAAAATGGGTAAA ACTTCTATATTACAAACCTTACTGTAGACTAATAATTATTTTACCAAAGC ATGAAAAATCTTCGATACCAGACAGTTTGGCTTGGTTTGtgaaacaaaaa taagaaaggaaaaagaaacaaaattgaaaatgaccTGCAGGACCAGCAGC TGAGCGATCTCGAAAAAAAGGAATGCGGATGGAAGAGCGCATGTCATTGT CGCAGCTCTATGTAGTGGGACACGAAAAACTTCTATCTGGGGCCGTGGTT GCGAAAATTCGTGTCAATTTTACATGGAGAAAatagaatcaaaacaaaca aaatggctacCCTTGCAGCAGGGCCTGTACGTCAAGCAGTTATCAAGAAA CTCACAGAGGCATTAAAGGTTTGTTTGTTGCAATATGTTTTCATGTTCCT CGTTTTTCTGAATTTAAAGCCATACATATGAAGCTGTGTGCTAATGTTGC AAAACCAAtgcaaagttgttttttttaatcagaaATGTAGGTCATTTGTC GGACGTCACTCAAAACACTTTATACTTTACTTTTATACTTTAGCCCAACA AGTAATGAAAAACAAtcttagttttaccagcttcattttgtgtttaaatg aaatgaattttaattctttatctctggttcatggtacatTGGGCTTTAAA GGTGGCTAATCTAATTTAAagggtcgaaattcaaaaaatttctgttCCGT CGTGCTCGTCGTGGGCCCCTCCTTTTTAGTGCTTTAGTCAGCTTTAGTTT AGACACTATGTagctgaaacttttttttgcctcAGGGTGTCCTAAAAATC CTAGATACGCCCCTGATCTTGcatcattttttattgtttttttaattata tacAGCCAGCTCATCTGGATGTAATCAATGAAAGTTTCATGCACAATGTT CCAGCAGGTTAGCATGTGTATTTTAATTATCGATTGTTTATGAAACATGT GTAAACGTTGTAAACACGTTGACTTTACCTTGACACTTGACATGTTATTT TCAAGTACTTTTTCATCACTGTTATTTGGTGGCAAAAACTCACTTTGAAA TCAATTCTTAAACTCGGTTTTGCGGAGAAAGTAGAGAAATGACGGTACAA AAATGAAGGAAGGAATCTGCTAAGATAAGGATTAACACCATTCACTTTAA AATCCTCCAAAACGTTTCAattaaaggttgttttttcataaaCAAGTTAG aatttttaggctgaaaatgaaaacatctaTTTAGGGACATTTAGAGGAAA AATTACCTGCTTGATTTATgggagactgttcatctaacgtttccagacca tctaagaagaacgacaaataactattaaaaagtgacaaaaaaaaacgaca aaccctaaccctaactatcaaagaacgaatTATAAAGTGACTGTGTCACT CCTACAGATTCATTCTTCTTTGTttgtcacgggaattaactacatgtggt ttaaaagaacgcaaaatTATGCATGCGTATAAgatctatttgggtgagct agaaacattagatgaactaactcATAGTGTTTAGTCACATAACCAGTATT TCTTATTCATCATCTTTAGGCTCGGAGACTCATTTCAAAGTGATTGTAGT TTCAGATGCTTTCAGCAAGAAGCCATTGATTCAGGTAATGTAATAATAAG Ttacctttaagggaagaaatttttgagtaacaaatttttgcaaaatttaa tttggttgttttttacaaacccgtgaaattaaattccacgaaacACCAAA AATAACTATTTACTTCTTACTCCTTTTGAAAACTGAAAGACCCAAAAAGT GACAAAACAAATCCTGACAGATAGACAGGTCGTTGTAAATTGTTATAAAA GTTGGTCCCACTCCTGTTATTTCAGAGGCATCGTTTAGTAAATGAGACAC TAAAAGAAGAACTGGCATCTGGGGTACATGCACTTTCTATCCAGGTCTGT ATTTTTACACCTATAGTTCTTTAGGTTTATTGTACAGCAAAAATTACTTA CCAAAGCAGTGAAAAcgggataaatttttttgtttcatgaatGTAATGAC AGAAGCTTTGGGGTTAGTAACTCATGCTGGAGTAATCAgttattcaaatt atttggaattttacaaTCGCGAAAATAAAAGTTCGCGAAATCAAAGAACA TATTATTACGAGTTCAACTGTAATTCAATTATAAACTCTAGTAACCTCCT AAAAGTactttctttgaagtttttcgaaagtttttgaGTGACTTTGTATG CCTTTGTTATAGATTAAAAAACACATCTCTTTTCTATTTACAATTTATAt agtcgcgaaattaaataaagaaggtcattttcgcgaaatttaatccacgc gaaatatttattaaattcTCGTCTCGCATAAAttagtacacgcgaaaatt tatccacatactcttaggttccaaataaacgggggggttcgaataaacgg gggggttggaaaattttctagattttaataaacgggggggacctaattgc cgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNAAATCGTCAATCTCATCAATCATGCAATCTGCA CTGATTTCGTCAATTAATTGAGGTTTGGTATCCATGACGTTGTGAATTTC TCGTTGTTTGAATGTAGTCGGACAGAAAATGAATTGACACAAGTGTTCGT AACTTTTGTGATAGAGTTCaaactgaatgaataaaaaaatgacaagattt aATCTAGGTAACAAagtgagaaaaatgaagaataatgaaaatattgacaa agtattttagaggaaaataaaagaaatctaagttaataaattaaataaat tcttaCCAACTTGCCAGAAATAAATGTGGTGTAAATTCTGTccaataaat taaaattgaaaattgatgttgaaagtttgaagacgtGAATTTGAATGTTT ACTTTGAAAGTTTGATTATTTGACTTGAGTTCACATTTTTCCTCGTATGA TGCCTCAACAGACACTTAATtgattatgaaaaattgaactgaTACGAAAA AATCTGAGTGTAATTTGAAATGCTAGAAAAATCGCTAAGGTATAAATGAT ATAAATGATACAAAgaaatgaataaatatttttaattgttttgtgcGTTT AAATAAAATGACGTATGCAATTAAAATGGGATGACTTTTNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNgggggggtcctaataaggtccgggggggttggaaaattttcgaa aaattaacaagcgggggggcccgtttatttggaacatAAGAGTAAGGTGA AAGtcttggctgaaattttgggaaGATGTCTTAGGGTcgtttttcgaatt ttggctagaacccgtcatctcgcaaacctagtaccctccTCCTCATGGGT TTTTAAAGTTTCAAGAGCCAGAGTGATAAATCAGCAGAAAACCTgttcat ttcaatgttttttgcTTTCTAGGCAAAAACTCCAGAGCAGTGGGAATCGA ATCCGAAAATATCAGAATCTCCTAATTGTATGGGTGGTAGTAAAAGGTAA AAACTACATTAGTACTGGTTATAAAGGCGTGAAGATTGTAATTATATAAG TGTTCAATTTGCATCGGATGAAGACATTAGAATGTTGGATAAAGATACAG GATGCGGAAATTGCGAGTCATCAACTCATTGTGGAACAAAACTGGCTTAG AACTTACCATGGTTATTCAGAACTTACTATGGTTATTCAGAACTTatgca atgaaaacattaatTTCGATCAAAATATCCATGTTGATAAAAGTGGAGAA AAACGAATCATTGAAATAccacacaaaaaatttcaaactttcaatgttCG AATACaactatatttttcattttcttacttTCTAGAAAAATGTAAAGAAC ACATTTGATAATAATAAATACTTACTGTACAATATGATGCTTTTAAATGA GAATATTCtgattaaaaatcaaatataaatGTTGTCTAAGGTTATTGTAA TTATCTTAATTTCAAATCTCACCTTGTTTAATAACTTGAATGGTTTGTTA ATTAAGTACCATATTCTTGAGGGAAAATAGTTAACTATCCTAATAATTCG CCTGTCATTAACCATGggtctattttttattttgctttggttAAAACTAT GAATAAAGATACACCTTTCTCGCATGTCTCGAAGATTAAAACTACTAAAA CATACCTGGCACTAACAAGAATAAGAGCATAGCTCAGCTTAAAGTTTAGA AAATTAGGTAATTAATTCCGCTAGATATTTCTGAAAATCACTATTGATAT TTACATCTCATCTGGTGTGGAATAAAATTTATGATAAAGAGGATCTCACA TTGTTTTCTTGGGATAAATTTTAACTTTCATAATAAGACGTCTTTCGTGT CACCCTTTACACATAACTGATATCTGGTCTTGACTTTGTAACAACATGAG TATTGTAGAGTCGAAATTTAAACGCCATTATCTTGTTAATTTCAATGTCC CTATAAAAAGAAATACAATTTATGATAAATTTGTCTAATTACCGGGGCGG GGGTGGATCAAAATAAGGGACTTTTCCTTTGATAGctgtaattattttca aaaattattaaacAAGGGGGAGAGGTTCTAATAACGTCCAGGGTTTGGGA GAAAtcgaaaattaacaagcggggacACTTAAGAGTACCTTGAATACTTT TGAACCAGTGGGTCAGTGTTAGCTATGACATATTACAGGGTCAATAACTG TC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059344TCONS_00059344Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059344-proteinTCONS_00059344-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:326267..332068 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
BOLA1PREDICTED: bolA-like protein 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.15 11.26 16.01 17.58 2.58 1.69 3.76 4.74 9.4 6.08 6.56 7.24 4.18 5.95 5.11 4.02 9.8 9.18 3.6 3.27 7.4 6.39 9.16 7.91 4.39 4.37 5.82 5.61 6.31 5.9