XLOC_037850 (gene) - C. hemisphaerica

Overview
NameXLOC_037850
Unique NameXLOC_037850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_336:29663..33569+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037850 ID=XLOC_037850|Name=XLOC_037850|organism=Clytia hemisphaerica|type=gene|length=3907bp|location=Sequence derived from alignment at scaffold_336:29663..33569+ (Clytia hemisphaerica)
GCGGGGCATTATTGGCGATCGCCTGCGGGCGGTCGTTTTTCTTTCCATTG
GCGTTTGGAAGAAATGATCACGTGCTGAAATTTAAGGAAAATGAAACCTT
CAATGAAAACTGACCAATCGAGTTGCTTGATTCATTCTAGTCCAATCAAA
TCTAATATGGTTGTCACGTGTCTAATGGTCATTTGGCTAATTTCAAAACC
ATGCTGTTCCTTTCTTCGCGGTTAACCTTCGACAAGTTCGGACATTGTTC
TACCACTCGTATTTTTGAAAGCAAAATGCCCAAAAAGACAAAACTTCAAT
TCAAAACGGATTCAGGTAATAAGCAATTAACTGTTTTGTAATCACAGGGA
AAATATGGTTTTGTTGATTTACAAAAAAACTATTCCTTTACTCTAAGAAA
CTCTGTTGGCCATTATTTGCCCTTTTGCTTTGCTTGAAACCCACGAACTG
AATcagcattttttatttattctacAGACTCCAACCAAGTCACTAACCAT
TCTACAGACTCCAACCAAGTCACTAACCATTCTACAGACTCAAGACAAGT
TGAACCTGCAAAAATCAACTCTCCTGGAAGTAAGACTTTCTTCTTCATGT
ATTAGATTGAATTTAGGTCAAAGTTTTATAGCTACAGGAAGGGATACGCC
AAAGGTTTTTTTCtgagaagaaaaaagaagataaatAGGTCTTAATTAAA
GAAGTACAGGAATTTTTGAGAAATGACATTCTCCAGGGGTAAACTAAGGG
TCTGTTACATGTACCATTCTCCCCGCTgctatgaaatttttttgcattAC
ATGCATATTTTATTTCACATCGCTTcaggcaattttcatttttggtgaGA
TTTTCTGTCTGTTGTCGACGGCAAAATGATATTTTGCCCTATTTTGGTTA
GGCGAagggttggcagacgatatcatccaccaggatgcaagtgaaatttt
tcaatctacggacctagacgggggttcggttattatcagttagggttagg
gttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNatgcaagtgaaatttttcaatctgcgg
acctagacgggggttcggttattatcagttagggttagggttggagctcg
agagtcacaatataaggccgaaggcctttTTAGGGGCATCCGTACCCTGT
GACCTAActtagggatccttgtagggatccccgtagggatccttgtaggg
gcaccggtagggttgggagctttcttaataaaggtctgtaaattacacac
taaaagtatttgtgaatgacagcatTTGGCCGTGTCACGTTGGCGCTagc
ggttaggcattgggtttgtaaaccaaggttgcttgtaTTTGGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNActagagaaagtcagaaaatcaggatagaagataggaaagtagaaaa
taggtggaaaataagagaggatgcatcctggtggatgatatcgtttgcca
acctaGGCGAAGAAAGTtgccaaaattaatttaaattattCCAACATACC
AAAGTATTCTTCGCCAAAAAAATAGCAACTCAtgcttttgtatttttaaa
tttcaggATCTACTGAGGATGATAATGAAGCCCCTCCTCCTTCAACTCct
aaaaaacaaagaatgaGCTTTGCAGGTAATGACCAATTTTTCTGCTTGAA
TGGGCTTAAATCACAGGCTTATAGATATTACAATGAGATTCTATGCACTT
GTTTCTTGGATGATGAATCTCTTATTGGCCTTGGTTAAATATCATTGCAG
CAAAATTACCCGTCGCACGACTTCTCGTGAAATACTTAAATATTATACTT
GTTCTGGATATTATTTACTTGCGATATTACTTATTTTGCCTTTATAATCA
AATCTTGAAACAGCTTTGATTGTTAGAGGTGCCAAAAGAGAAGTTGTTTT
AGTCTCCCCAATTCTAGAAATAATACTTTTTGAGCTGGAAATTGGGCTCA
TCATTTTCCAAATGTGGATATGTTTAATAGGTGTCCTTTTATCATACTAG
ATTCTGAAACAAGAGAGGCCCATGGCTATGTCATAAGATTGTATGATGTC
ACAACATCCCCCTCAAAAGTCAAATATTTCAATGCGGTGATTGATAATGG
TATACAAGAATCAAATATAGTGTGCTACAATCCTGATCTTCATGAAGCCT
TTTCATCAGCCAAACTCAAGGATTGTCcaatcaaaatttctaaattcacC
GTTGAAAATGATCAATACAGAAATCAAACTAAATTCAAACTTGGTTCTGC
AGGTAATGCTGAGTTTTCGGACATGAACATTCCTTATAACTTAGttgcaa
aaaaattagaatGGGTCAATGCATTTACTGACTTGATCAATGTTGAGAAT
ATCGCACTTGAGAGTATCATTAACGTTGCGTGTCATGTTACTCTTGTTGG
AGAAGCCTTTGACGAAGACACAAAGTTCGGCAGAAAGAAAAAGATGAATG
TAAGAATTCATGACAATACCATAACAGAAAGTATCCGGCTAGTTCTGTGG
GGTAACCATGCACAGAAGATCACAGCGAGTGGCTCCTACCGCTTCAAAGA
ACTCAGAGTAAAAACGTACAATGGAAGATATCTGACCACAACGGCCTACA
CCGAGATAACCCAATCTAATGAATCATATGAGGTGAGATTGGATGATAAT
TACAACTCTCTTAACCAAGAAACTATTGTTGCCTTCCCTGCAATAGGAAT
AAACAAACTGGAAACCAATTATTATTGTTCCATCTGCAACCATAAAGTTA
TCAAGCTTGGCAAGTATGGCATGTGTAACAAATGTCCCATGAAAGCACTC
CTCggtgagaaattttttgatgtcaaaGTTTCCTTTAAAAATGGTAGTGA
AAATGTAATGGTCACATTTCCACATAACATTTTCATTCAATTAATTGAAA
AGGTCAATGCAGATCATAATGATCTAGACGACATTGAGGAAAAACTTCTG
GTTACAAAAGACCTTTCTGTTAAGTACAAACAAATGTCAAGAATTGCTAC
TGCAATCTTATAAATTTGTGACTTAGAGCAAATGGGACTCATCGTGTTTT
TTGTTCATTTATCTTTCAGTTTATATTTTATCTGATTCTACATCATCATT
TTGTACAGTAACATATATGTAgatgtatatatatatatctatATAGATTT
TATCAGTTTTTATTGATGTAAGCCTAGTTTGTGCTTTTGAACCAAAGAGC
TTTTACCATTTTAATTTTAACACGTCCTTCTGCCCCTTACTGACAGTAAA
AGTACGAAATAGACTTCTCCATATAAATCAATTAAATGCATAACTTGTCT
TAGAACtcgtttcttctttttgttgtaAAAAAGCTTCTTTTTTTCAGTAA
GGATTAAAATGGCAGTCTTgtaaatagcaattaaagtttgGCATTTTCTA
GATAGATCGTTCTTATTTCATACTACATATTTTTTAGGATaggatttttt
ttatcataaagCTAGGAAAAGGTGTACTTTCATTTTAAATGTATTCTACT
GGTTAGAGTTTTTAATTTGACTGTATACAGATTTAGATGTGAATAATTTG
TGTAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060155TCONS_00060155Clytia hemisphaericatranscript
TCONS_00060156TCONS_00060156Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060156-proteinTCONS_00060156-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_336supercontigscaffold_336:29663..33569 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81	1	0.44	0.44	28.64	18.24	12.68	13.5	4.61	8.6	6.8	7.37	4.44	4.68	5.62	4.21	4.46	3.57	5.92	9.64	4.89	5.79	4.11	5.1	0	0	11.22	6.43	12.59	13.04