XLOC_038268 (gene) - C. hemisphaerica

Overview
NameXLOC_038268
Unique NameXLOC_038268
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:43575..51718-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038268 ID=XLOC_038268|Name=XLOC_038268|organism=Clytia hemisphaerica|type=gene|length=8144bp|location=Sequence derived from alignment at scaffold_350:43575..51718- (Clytia hemisphaerica)
GCCAAGTCTAATCTTCAAAGGTAAAGAAGATGAGGAAGGAAAACTTACAC ACTCTCTCCGAAATCCACCGTTTTGTAGCAAGTTTCACAAAGCAGGATAG TATCGCTCGTACTCCCTTCCGAACCTTCAAGGAAACACGATCCTTCATTG GAATACGTATACGATAAAGATCTACGCATGCGCACGACGTCTAAATTCTG TACGGGGCTTCTTCGTGAGCGATGATGATTGGAGGTTTCAGGTTGATCGT TTTGTGGTTGGTTTGAACTCCTCTTGAATCGATTCTCGCCTTCTTCTTCT TCATCTTCCTCTACATTCTTATCTTCCAAATTATCTTCCAGAATATGTTT GATATCTTCCAGTTCCTCCAAAGAAGGTGGGATTCTTCCTAATTCTTCTC TCTTTCTTTTCTTCCTCAAAGCTTCTTGTCTTTTCTTCTTCTTCTGTATC GCTAATTCTTCACGCTTCTTTTTCTGTTGTTGTTTTCGTCTACGAACTTT ACGGATGATTGTTTTGTTTGATTTGCCGCAGGGCGGTTTAATACCGCCCA GCGTTTTAATTGCCGTGCATTCCTGGATTTCTGGATCTAAGTCTTCGAAA AGTAACATGTCCAATATTCTGGCCCATCTGGTGATCACCTGCACGTCTTT ACCTCTTGATAAACGGTGTTGAGCTTTCGCCAGCGTTCTTTCAGCGTCCG TTCGGTTTTTAGGATTCGGTCGATCTTTACGACGCAATTCAGTTCGATTA CGTGGTGGCCCTTTTGTATCAGTGTAGTTTTCCAATCTTTCTTTACTAAA GAACAAGAAATCAGGTACTGACGAGTCTTCGCCACCGCTTAGTGATTCAA GAAGATTGATAAGTTCTTGTTTGCTGTACTTGATGTCCAAGGTGTTGGAT GATGTGTCTTTAGTCAGGAGGATCAACAGCCAGATCGATATCTGAATAGG TAAAAGCAAAAAAATATGTCAAAAGTATTTTCTCATCATATCTTATTCAT ATAAAACTTTCAAATCAGTTAAAGGCAAAAACTTTTTCAAATTTATCCTT CATTTTATTCTATTTTATTGTTGCTTCATTTTATAATACGAACCAAAAAA TTTATTAACACCTGCTATAAAATGAAATGATTTTTTTGTCAACTTTCTAT TATTTGAAAGGGCGGTATCAGTTTTCAAGCTCTTATTTTGTCTCATATTT ACAAAATACACCGAATGATTCCAGCTATAAAGTTAAAATGTTTTCAAAGC TAATTCACCACGATCTCATTTGCTCTCAATGGAAATTTTTCTTTTTGTGA TTTATAAGTTAATTTGCTGGATTTCTTGGTTTGGTTTATTATGTTGAGTA TATTTTACAACCGTTCTCTTGGTTGTTGCTCTATGGCATGTTGTTATAGA GGTAGGTCACTTCCACTTAGTTTACCCAAGTATAATTTGTGATACTAAGT TTTAATAGACCCCTGTCCTACAGCCTCGGTGGAGCTTTATCCCACAGCAG GGGTAAAAGTTCTTATCAAAATCCCGATGGGGATAAAAATTGTACTGCTC CAGGCTTAAAAAATCCAGTGGGGATGGTTTTGGAGTGAATTCAAAGTCGA TTTCCCAGCGGGACTGAGCTTGTAGGATATTCTTCCTAGCGGGGGCAAAC ATTTAGCCATATTCTAGTGGATTGGGGTTTCAGCCGGTCTGTGACACATC AGGGTGTGTTAATATACGGAGATGAAAAATCAAAAATGAAAGCATAGAGT AGTGTGGTGTAATTGTAATTGTACCACCTTCCGAGATCGATTTATTTTGA TTTTAGGGAAAACAGGCCTCGAATTATTCTTTTATACAATTAAGTGTATA ATTTGCATGAAACAAATCAAGTAACTTTTCTTTTTCAAGCAATCTACATA GGGGGGTTTTCACGGTTGGCGGAGGAGCGGAATCGGAATTACGGAAATTG GGTTCTCTGACGGAGACGGAAAATTAGACAATTTTAGTGCGGAAAAACGG AATTTAGCAAAAAAATTTGCGGAATTTCGGAATTAGTAAAAGATATTCAA AATTTGCGGAATTTTCGACAAAAATATTGAATTTCAAAGGAATTTTGGGT GACGGAATTTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGAGAAAAA ATTGACGGAATTGCGGAATCGGGTACCCCCTGAAACCCCCCCCTACATAT ATTGCAAACTTAAGAATCTAAATCAAATTTATAACTGAAAATCGCATGGA TGGGGTAATATTTTTTTTCAGTTTTGAGCTTAGGCATCCGGGGATAAAAA AGGCCAAAACTAAGTCTGCTCCGTTGACACAAACTGTCCGAGATCTCAAT ATTCAAATAGGATAGAAATCTTTCCGGTAAGAAAGAACCTCTGTATAAAT ACCAAAAAGTTTTAATCGAAAAAATATTCTCACCAAAGATCGAATCTTCA TATCTTCTCTATAAACATACAACCTTCTACAGCCAACCACACAATTTGTG TTATAGAAAAAAAAACGATTTAACAGAAAAGAGTGAAATCGCACGGCCAT GGCACGGGAAATAAAAGCATTTTTTTTTGTTAAAATAATAAACTAATTAA GTACATAAGTAGCAACTCCAACATAGGGCCAACATAATCATTTAATGATG CTTTCAAAAAAATATGAATCGACTTTCTTAATATTCTTTAATGATTGAAT AATTGAATAATCCCTTGGTTATAAAAAACCTTTCCAACGCCTCCGGTTTG GGAATGCAAAAAAAAAAATGATGAAAGAGAAATTACTTCCGCTTTACTGA GCTAGTTAAAAGTACTGGCATAGGACTAATCTGATTGGTTAAAATCTCAA AATTATCACAGGAAAAACTTTTCGATTTCCAGGGTTGGAAATTCAATATT TTTGGGTTGGAAATTTTGGTTTTATAATTGAGGGTTGGAAATTTGAGCGA TTACCTTAAGCTGATTTGGAAAACGTAAATTACCCATAGGTTTTGTAGAA TAAACCAATGCCCTTGAAAAATCAAGTGAAAAAAACCCATGTAGAAATGA CAATTTTCCAAGGCTGGTTGGAAAACATGACTTTTTGGGTGGGAAATCTT TATTTTCCAAACAGTTTGGGAATCGAAAATAAGGTCAAAAATCAATGTGA AAATACATATTTTTGTAAATTTGCTACCTCGGGTTGAAAGACTAGACTTT TTGGGTCGGAAATTTGTGTTTCTCCCAAACAGTTTGGAAAACGTTAAAAA CCCATGTAGAAATTACGTTTTTGTAACCATTTTCTGCACATGTCCTTTGA GAAAACCACAAGCGATTTTTCGTTCAAAACTGTTTTGATGTATGGCTAAC CTAGATATTAGGCTATAAAAGGCCGCTACCCACTCGGAATTTTATGGTCG TACAAGGCGCACGGCTTAATTATTGCATAAATTACATAAATCAAGCCTTC GTGGGCTCTCGCTTTGAGCGCAACAAGAGTTGAAACTTTTTAACTTTTTT TGCTAGGCTGTGCGGCTTCCCTATTGTTCTTTTTTAAATAGCCAATCAGA AGAGACATTTAACTCTCTTGTACCGTGTGCAAAAAATATCAACAATAGAA AAAAGAAAAAATGTGTGGAATGGGAAAAGCGTTCAGCGACCAAAGCGCCC GAGCCTGTGCGCCTTGTTCGCCGACCATAAAATACTGAGTGGGTAGCGGC CTTAATATGTGAGCAGTCAAGCTGTAAGTTTCCGTCAGGTGAGGCGTCTC TTCGGAGCGGCCTCGGTCAATCGCGGTGAGTTCGCACAGTGATCTAAGAT CAACCACGTATCTATGCGAACAATAACCAGAGATTGACCGGGAGCCATCG AGCCTAGGCTAGCGAGTTACTGTTCACAAAAACAAAAACCTTGTTTAAGA TCATTTTTTCCACATCTCTGCCATCACTTTTTGGATTTAGGCTTTTTTCA ACCTAGATTTTTGAAAATTCCAAGCCATGGAAAATGCAAAATTTCCAACC TTGGAAAATGTCCCACATTTCCAGATTGGATTTTTCCATTGGATTTTATC TTTTTTCCAACTAAGAAAACTTGAAATTTCCAACCTTGGAAATTGAAAAT TTTTTCCTGTGATAGATACGTGGATTTCACTTTCCAGTAATATGCTTTGC TAATGCGTCATCAAAAATATAGAACCTGAAAAAGTTTCTTCAAATAGCCA GGAAATGTTTTTCTCCCAAAGACAATACATTTTTTCAAAGAAGACATCGA GTGAAATAAATGTAGTAGGAAACCCTATTGAAGGCCTGGGAAATGTAAGG GTATCTTTAAGTTTTTTGCAAAATATCAAAATAATTAGATTTTTCAATAA GTGGAGTGTGACACTTTTTCAAGTCTTATTTTTATGGTCTTAATGTGGAC AAGCGTGGATAGTGTGGAGGTATGAAGTTGTAGGCACTGGTAAGTTAACA ACCATACACGAGGATGCTGACATCCACACTAATTACTCTGGGGTACCTAA TAGCCGGTGGGTTTGGAATAAGCGGGGGGGGGGGGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNGGGGGGGGGGTATGGAAAAAACCTCAAAACTTAATAAGCGGGAG GGTTGGAATAAAACTGTCCTGGGTGGAAAATTTTTGAAAAGGAGGCTAAT ACAGCAGAATTAGGACAAAAGAGGAAACTTTCAAAAACATTTTCCCAAAA GTTAATTAGCGGGGGGCGGGGGGCGGCTATTAGGTACCCGAGAGTAATGG ATTCGTGCTCCTCGGGCACTCGATCAGGAAACTACCGTATGTATGGCCAA AATTAGGTCTTTAAAATCAGACCCTACAAAGAAAATTCAGCCAAATTTTA GTAAATTCAGGCAAAAAGTCGCCTCTGCATTTTCTTGGAAATTTTGTACC TTTAAAGAAATTATTGGGCAAATAATGGTGAGATTTTGGAATACTTTGCC CAAAAAGCTTTGTTCTTCACACTTTTTATACTCATGCAAGGTATTTTCTT GCACTTTTCCTAATTTTGACACTTACATGTTATAATGCACTTTGGGAAGC GTAAAAACGTACCCTTAAGGGTCGCACTCTATGGTAGGTCTCTTACCTTG AGTGCCCTCCCCTCCAGGTCCTATATTATCTATGATTCAGACTTCTCTAA ATGGAGCATATATGTAGCAAGGACAATGATTATACTTTTGATACTCATCT ATTAGCTGTCAGCGGACCCGGCACTTTGTCTCCTCTTCTAAACTCATCAG AACTTAGTCTCCTGTATCTCAGTTACCGAAAGCAAAAAACCTTTTAGTAT ATGATCAAGGATTTATTATACACTGGATATACAAGTAACAGATTTTTGCC GATTTCTCGTGTACTAGCTATGTCCGCAGTAATGATAGTATTGTTCACTC TCCTTCCCTCATTAAATGATTTTTCGAAGCATTTTTATTGCATTTCATAT CGAAAATCACTCATCCAATTCCCAAAAGAGATTTAAAACTTTCCTGTGAG AGTCGGATTCTTCCACTTAATTGATAATAATAAGTCGTTATGACGTTTCA AGCTGTGAGAAAGATGCAAAAGACGTGTTGTATATAAGAAATTTAATGTT GACACCGGAAATTTTCAAACTTCAACCTAAAAAAAAACACCTTGCCACCA CGTGCCTCCAAAGGATTTTCATACCACAGTGGAGCCAAGACACTCAAGTC TTATGTATGTTGATTTCAGCTCTTACGAGGACAGTCTTGGAAAGATATTT CCGATTGAAAACTTTGTGTCACTATAAGCATTTTGGCTGAATTTCTTGTC TAATGATGTTTTTCTCACATTAGATTTCACAAATGTATGTGCCTTGGAAT ACTCGACTTACTTTCAAACTTTTTTTTCTGCAAATGTACAGAAAGAAAGA GCTAGAGAACTTTTTAAAAATAAGACTGATAAACATTTTTTTAAATCAGA CACCTTCGAGCCGCCATGACAGTTGTCCTTTGCGGACAAAGCTAGAACAG CAATTGTTTTCTGAAACAATGAAATTACAATGATCGCTATCCCTCGTTTT TTGAGTCGTTTATCCAGTGTATAATAAATCTTTGCTTTCTCGGACCAACC AACTACCAACCATCATTTTTTTCGGTCCCATGAACTACCCACAAAGGAAC GAGACGCACTAGGGCACAAGAAGCACGCAATTGTCTGAACACCAATAAGA ATGGAAAGTCGCAAGATTCCAAACGAGCATGCAATGTCAAATAATGACTG CATACTCTTAAACGAACGTTACGTCACCAAGTGACGATGATTCTTTCTTA AAGGGAATACGTTTTCTCTTTATTCCCATAGATCGATAGCCCACTCTCAA CCCTTGGGAATGCAGTGAGCTGTAAACCGTTTTGGAAGCCCACGGTGAAT TTGTTAGAGTAGTTAAACAAGCAAATGAGGAGTGAGAGAACTTTGAATAT TTTACGATAAATTTTCCAGCTTAAATTAATATAATTATATAAATTATTAT TAAATTAAATATTTTATTGAATATAATTGCTAATCAGTCAAATGATGCAA AAATTATTAAACTCAAGAGCTTTCTCAACTTTTCACAGTGCTAACCACTT CATTGGATAGTTCATCATGCATTTATTATGCAATTCTTGTAAAATCTTTT TTTTTTTTTTTTTTTTCACGAGTTGAGTTTTTAATTTGAGTCACCAACCA TATACATGTGAGTCATCGAATTCGCAATACACTCACATTCACAGCTGACA TTCAGTGGTTGCTGGTAGCTTTCCCAAGTGTTCGAAACAGAATCCACTAA TTTCTTGAAGGAGTAATAGATGACCTTCTGCGTGCATGTTCCATCTCCAC TAATGCATATGGTCGCGCTATCAGAACATTCAACGCTATTCGCGTACTGC GGAACTCTAAAAAAGAAAACAGTTACATGAAAGACAAAAACTAGCAATCG TCGTCATAACCTTCACCTTCTAAATTCTAGCAGGGGGGTGCTTATTTGTC CCCCTACCCCAACGAGGTAGATATGGTGTAAGGTATACAGTTAAGCATCA ATGAGACGCACCAGGGCAAATATTCATACAAAAAAGAAGAGAGAAATAAA AGCAAAGCATGCCAAGTCTAATCTTCAAAGGAAAAGAAGATGAATGAGGA AGGAAAACTTACACACTCTCTCCGAAATCCACCGTTTTGTAGCAAGTTTC ACAAAGCAGGATAGTATCGCTCGTACTCCCTTCCGAACCTTCAACGAAAC ACGACCCTTCATTAGAATACGTATACGACAAAGATCTACGCATGCGCACG ACGTCTAAATTCTGTACGAGGCTTCTTCGTGAGCGATGATGATTGGAGGT TTTAGGTTGGTCGTTTTGTGGTTGGTTTGAACTTCTCTTGAATCGATTCT CGCCTTCTTCATCTTCATCTTCCTCTAAATTTTCATCTTGTTCTTCCTCT GCATTCTCATCTTCCAAATTATCTTCCAGAATATGTTTGATATCTTCCAA TTCCTCCAACGAGGGTTGGATTCTTATTAATTCTTCTCTCTTTCTCTTCT TCATCAAAGCTTCTTGTCTTTTCTTCTTCCTCTGTATCGCTAATTCTTCA CGCTTCTTTTTCTGTTGTTGTTTTCGTCTACGAACTTTGCGGATGATTAT TTTTTTTGATTTTCCGCAGGGCTGCACTTCTGGTTTAATACCACCCAGCG TTTTAATTGCCGTGCATTCCTGGATTTCTGGATCTAAGTCTTCGAAAAGT AACATGTCCAATATTCTGGCCCATCTGGTGATCACTTGCACGTCTTTACC TCTTGATAAATGGTTTTGAGCTTTCGCCAGCGTTCTTTCAGCATCCGTTC GGTTTTTAGGATTCGGTCGATCTTCACGACGCAGTTCAGTTCGATTACGT GGTGGCCCTTTTGTGTCAGTATAGTTTTCCAATCTTTCTTTACTAAAGAA CAAGAAATCAGGTACTGACGAGTCTTCGCCACCGCTTAGTGATTCAAGAA GGTTGACAAGTTCTTGTTTGCTGTACTTGATGTCCAAGGTGTTGGATGAT GTGTCTTTAGCCTGGAGGACCAACAGCAGCCAGATCGATATCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060960TCONS_00060960Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:43575..51718 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.16 14.91 14.38 11.6 2.92 1.68 9.39 11.94 4.14 6.04 3.9 8.05 3.86 3.55 0.1 0.21 0 0 8.14 8.58 0 0 6.29 3.63 0.12 0.31 0.32 0.18 1.2 2.19