XLOC_038273 (gene) - C. hemisphaerica

Overview
NameXLOC_038273
Unique NameXLOC_038273
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:125217..133929-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038273 ID=XLOC_038273|Name=XLOC_038273|organism=Clytia hemisphaerica|type=gene|length=8713bp|location=Sequence derived from alignment at scaffold_350:125217..133929- (Clytia hemisphaerica)
GCTGAACCCGAATGACTGTACAGTGATATTCAGTCAGGTTTGTATCGTTG ATTTATTTTACACTTTTAATACTTTTTAATTACTTTTACTATACTAATGA ATCTCCAATGTTAACAGCTCAAGTAACTGCAATGTTGTGTGATTGTTAGA TGCACTGGAGAAAGGGACACACAACAACAACAAACANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNCTCAGGTATTTTCTGATAAATATGGAAAGTTTCACTGTCT GAACATTTTTTCCTTCGCAGCGCTTTGAAATCAAAGATGAGTTGTGAAAT TTTTTGTGTCCCACAGATCTAATTTTTCTAAAAACGGCCTTAGTTGAAAC AAATTTTTAGACAAAAGTGTAGAATATTACACCTGCATATTATATATGGT TGGTGGAAAGCTAAAAGAAAGCTCTAAATTACACAAAAATAATTATTTTT ATAGCTCAACTACACAAAGAACAATTGCTTGTCAAAGTTTGACCTAAAAT TGAAGATTTTGATAAGCGTCAAATAAAAAACAAGCAAACCCGGAATGGCT ATCTATTGCAGCTTGTGCGCAGGATATCTCCGGCGTAGATTTGAGGTTTG AGATTTGCTGCCTTTAACTTTTCCCAGTTAAGTTGGCGCAGCTCCGCCGT AACATTTCCCTCCTTTCAAGACTGGGTTGTGGGAAGAATTGATATGTGAG TGACCCCTCTTAATATTTATATATTTTTTGTCTGCCAACATCCCGGACAG TTACATCAAAATGCCTTGAAAATGTCAATATGAAAATTGCGTAATCAGAG AACGTATGTCTCGCTCATNCCGGAAACTGAAAAAAGATCAAGCAACCAAA AATCACTCACCTTTCATTACTTGATGTTTTTCTCCTTCTGGCCTTGAGAA AAACCCTGTCTTTTGCATCAGTCATATCTATAATCTTCTTCTTCTTCCGT TTTTGAGACTTTTTGAGTTTTATTATTTGAAGAAATTCCAAAAAAAACTA AAGAAAAAATTAAACCGAGCAGCCATATTACTTTTACCTGATACCAGAGC AACTGTTTTAAATCGTGCGAAGCGTTCTAAGTATACTAAATTGTCTCCAC GATCTTAAACAGAGCTTGTCGTTTACTTTAAAATATGTACAACTTCAGGT ACTCAAATCTTTTTTGCCGAGACCGAACTTGAAAAATAAACAATTTTCCA AGAATTTTTCCTGCCAGTTAGAATTACAGTCGGGCTCAACAAAATGCGAG CGTACTCAGTAATTTTAGTAAGTGTATTCAGGCTGAACCCGAATGACTGT ACAGTGATATTCAGTCAGGTTTGTATCGTTGATTTATTTTACACTTTTAA TACTTTTTAATTACTTTTACTATACTAATGAATCTCCAATGTTAACAGCT CAAGTAACTGCAATGTTGTGTGATTGTTAGATGCACTGGAGAAAGGGACA CACAACAACAACAAACAGACAGACAGGAAATCATGTTTGGGCCAAAATGG CAAAACATGATGGGCAAACTTCTGTTCTGATGTTTGGGTCACTAAAATTT GTATTTTAGCTCTTAAAACCTGGTGATCAAACACTTAGAACCCAGACCGC TAACTACACCAAGTTTATCAATCATACTTTCTGTCCTTTTTAACTTTTTC GTTTTCATTCAAAATGACTGGACGCCGATTGGAGAATTAGAGAACGCCCG CTGCCTAACCACCTATCGCCCGATGGTAAATAGACCTTTTTTCAAATAGG ACGTCCTGTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGGGC CATCATGCATAATTACTGTATCATGCATATTGTAAATAATTATGCATGGT TTTATCATTGTTTTTCTACTGGACTACATAATTATTCAACAGGGTGGCCT CTTTGAAAAAAGGTCTATAACAAGTGTGTAACTTGCAGCGCGCGAGTGAG GTTAAACGCTCCATCTTTTGCCACTAATTTGTTTTTCTTCGTTCCAGTAT CCAGACCCGTGTGTGTTGTTCCACTACAAATTTTTTCATATTTTGCTTTA AAAGCCTACTCTGTGAGAAAGAGAAATCGTAGGTTTTTTAATACGCTGTT CATTAACTCAAATCAAATGACTTTGGAGGTTTGGTGAAATGAAAGCCAAA TTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGCCAAGTTAGAGCAGTTG GCGGTAATTTTTTTGCTACTATAGGGTACGATGTCATGTTGTTGGATATA ATTAAAAACTCAAGCACAACAATCACATCATATATCACGATAACTCCACG TTTCAATGGATGCAAGGGAAACAACAACAATAACTAAAGTTTCACGCTCT CCCATCCATCAAGTGATAACTTGTTGAACATAGGTCCATGGACCTTTGGC TAGAGGTGATGTCATGTCGGACACATATTTTTGAAATTATAATGTTTTTG CATAGAACATAGTGGGCAGAGGGGTATCAAGCCCCCCCCCTTAAAAATGG CACCCCCCCCTCTTTTAGCTCAACCCCCCTCTTAAAAATGAAAATTCCTC AACCCCCCTCTTTTTATTCAACCCCCCTCTTTTTCCCAGGTTTAAGTTCA ACCCCCCTCTTTTTTTCGACCATTTGCGGTCGCAGCTGTCTTGCAAAGGT TGAAAAAGCAACATACTCCATCAAGAGTTGTAGAAACAGAGTTTTTGCTT CATTCAAATGAATGGAAATATAATAATTGTTGAGAAATCTAAAAATGAAT GGAAAACACTCTTTTGCAAATTGCCAAATCTTCCAAGCCCCCCCTTAAAA AATTAACCCCCCTCTTTTTGTCCAAGCCACCCCTTTTGTGAAGGTGGGGG CTATGTTTCTAGAATTTAGCCGGGGGCTATTTTCCTTAGCCCCCCCTGAA AAATGCTGGGGGCTGGACCCCTCTGCACACTATGAGTTTGTTGAACAACC ATTAAAAGAGTGCTCAATACTCTTTGTAGAGCTAATTCATAAAGTTTTTT TAAAATTATTTAGGTACCATCCATGGTCTATTCATATGGTCTATTCATAT ATCACTGTTGAAAGTCTAAACAACTATTTTCTGAAATGTTATTTTAGGGA CCTTTCAAAAAGTATGTATGTTCAAATACAAGCAAAATTCCACCCTTCTT CCTTGTGCGTTTGTGTACGCTTTTGCAACTACCTCCTCCTTCGTGTATGT ACGCTTTTCCAAGGACCCCCCCCCTTCAAGGAAAATTTTTTGAAATGATA GCAAATTTTATTAGCAGCTCAACAAAAACCATAAAAAACAGGGAAGAAAA TCATAAGGTAGCCTAGATTCACCAGAAAAAGTTTCAGCCCATTGAAAACT GTGAATTTATATATAGTTTTTTGAGAGCTTATTAGGTGGTTTGAGTATAT AGTTTTTTTACCTAAATTTTTTTAATCCCTTTAAAATATGAACACTTAGG TCCCAAAATTCATAGCGTCAGCCCCCCTGCTGGACCTATGTAATTGGGGC GAGCTAAAATCTCATCACTTAACGTGGGGGCTAAAATAATTCAGCTTGCT TCAATTACTCAAGTTGAAGCTCATGAATCTTAAAAATTTTTGTCTGCGGC GCAATATTTTTATAGAAAGTGTGCAAAATATTTTATCTTAAACTTAGAAC TGAACGCAATTTACATTGGAAAACCCTTTTTTACTGGATCAATTTTTTGA AAGTGTCTAGGGTCAAAAGTCCTGGGGTCCCCGCCCCATAATTCTTTGGG GGGGGGGACTTAAAACTCAGGGGGATCTAATTTTTGCCTAAGACCTAAAC CCAGGCTGCCGCTATGAAAATTAGGGTTGCTCTGAAAGTTATCTCTGGCC TTCTTCCTAATTTCAATTCATAATATTAGGGGCAGGAAGGAAAGAATTTG CATTGCACATTATAAGTATTATCACTGATCAAGTCAAAAGTGGACTAAGT GAACAAAATTTTCTGATGAATACTACTAGTACTAGAATTTTTTTTCTCTC TCCCTTTATGATTGATTTTCACAGAAAGTGGTCCCGACAGTGTGTTTCAA ACAAACTGACCTAGTATACTTTAAGTGTACAAAGTTGGGTTAACAGAAAC TTTCACAATTCTCACAATTCTCTTAGGCCCTTTTCGTGAAATCAAATAAG CTTGAAATTTATGCTTTTGTCAAGTACCTTAAAGAACCTGATAATGTTTC AAAACCACAATGAATTTGAACCTATTTAAAGTACTGTTTTAGCCCTATGC CCTAGGACCTTTGAATTTAAATGACAAAATTTTTTTATCATGCTCAATGA TCACAATTCTCTAACTCTAAAATTTGTGATTCTGTTCACTGTTTGACATT GTTGTTATGGATTATTTAGGTAAAATCTGTCTAGTAGGAATGGAAGATGA GCTGGGTGTTGTAGACACTGTGGACAACTCAAGAGCAAGGGCCAACAGTG ACAGGCAAGAGATATTTTTTATACACGTCAATTTTAACCTTAAAAACTTT AAAGTTCGAAACTATGTTGTTTGAGTGAATTTATTCGGGTCGAATATATC AGTATTACTGATACTGTCTTTTTGACGTTTTTTAACTGTTTTTTATAATG ACTTTAGACTTTATACCTCCATATCTCGATAACTACTTTTCCAAAATTAA AAATGATACATCAAAATTTAAGTTTGCCTTTCCTCTTTACCATGAAAAAA GAATTTAGTTAAAATTCAACTTTTTCGGACATAGTTACCCTCCAAACTCT TATACTTTTTCGTGGTTCACCCGGTAAATGGAAATTTTGATGATTTTAAT TTTCAGGAGGACATGTTGGGTTTGCTTTGGAACAGACGAGGATGACCCAG GAGCGAAATGGATCAATCCATGCAGGTGTCGAGGTACCACCAAGTGGGTA CATGATACTTGCTTACAAAGGTGGTTTGATGAAAAACAACATGGAAATCC AGCAACTCAAGTCTTTTGTCCACAATGTAATACGGCATACACCATTTCCT ACCCTCCACTCAGTCCACTTCTGGTATTGATTGACTATGGAGAGAAAGCA GCCAACCGAGTGGCACCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCACT TTATTGGTCTGCTGTGACTTTTGGTGCTGTTACAGTAATGCAAATACTTG GACATAAGGAAGGACTGCAAGTTATGGAGGGTGCAGATCCTCTATTCTTG CTTGTTGCTTTACCTACTATACCCCTGGGGTTGATACTAGGAAAAATGAT ACGCTGGGAGGATAAAGTTTTACACTTGTGGAGAGAATATTCTCCTNTAT TTTTTATACACGTCAATTTTAACCTTAAAAACTTTAAAGTTCGAAACTAT GTTGTTTGAGTGAATTTATTCGGGTCGAATATATCAGTATTACTGATACT GTCTTTTTGACGTTTTTTAACTGTTTTTTATAATGACTTTAGACTTTATA CCTCCATATCTCGATAACTACTTTTCCAAAATTAAAAATGATACATCAAA ATTTAAGTTTGCCTTTCCTCTTTACCATGAAAAAAGAATTTAGTTAAAAT TCAACTTTTTCGGACATAGTTACCCTCCAAACTCTTATACTTTTTCGTGG TTCACCCGGTAAATGGAAATTTTGATGATTTTAATTTTCAGGAGGACATG TTGGGTTTGCTTTGGAACAGACGAGGATGACCCAGGAGCGAAATGGATCA ATCCATGCAGGTGTCGAGGTACCACCAAGTGGGTACATGATACTTGCTTA CAAAGGTGGTTTGATGAAAAACAACATGGAAATCCAGCAACTCAAGTCTT TTGTCCACAATGTAATACGGCATACACCATTTCCTACCCTCCACTCAGTC CACTTCTGGTATTGATTGACTATGGAGAGAAAGCAGCCAACCGAGTGGCA CCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCACTTTATTGGTCTGCTGT GACTTTTGGTGCTGTTACAGTAATGCAAATACTTGGACATAAGGAAGGAC TGCAAGTTATGGAGGGTGCAGATCCTCTATTCTTGCTTGTTGCTTTACCT ACTATACCCCTGGGGTTGATATTAGGAAAAATGATACGCTGGGAGGATAA AGTTTTACACTTGTGGAGAGAATATTCTCCCAAATGGGAATTCCTGAATA AAATATTTGGTGGAGGAGAAGAGAATAATGGGGCAATACGACGACAGCCC CTTGAGAATGATAATCAAATAGATTTTGTGAACTCGACACGTGTTTTGTG TGGTGCTTTGATGTTACCGACTTTTGCCACCGCTGTTGGCAACTACCTTT TCAAAAGAGTTCAATCACCATTGAAACGAACTTTCATGGTAAGTTTTAGG GCGATCATTTCTGTTTTTTAAAACTTTGTGATTTAATTGATTTGTTGCTT TCAGGTGGAAAGTTCTAGGTAAACTATAGTTGTGTTCGTCTGTCAGCCAA AATTTGTTAGATTTGGACAGTAATGTAAATATCAGAGGGGGATGCTCAAA GTGCAAATTGAGCTTTAGAAGATTAATTTAAATAAGATTTGTTTCTGGGA TGTTCGGGTTGTTAATTTCCATGCAATACTTTAGGCATACAAACTTTCGC GAGCAGAAACTTCCGCGATTTTCGCGAATTTTGGCCTTTTTCGCGAATAT AAATGTCTTTAAAAATTCTAGGAAAAATTCGCGAAAAATTCTTGACAAAA TAGTAAAATCTGTAAAACTTCAAACTTTGAAGAAAATGTAACTTTTATGG CAATTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAAGGTTTTAA GTCAATCCAAGGCAAGAAGCATTTGTCTCTCTAAGCCATTTTTTCATGTG AAAATTCTCAATTTTACGTCTTGATTCGCGAAAGTTTATGCTCGCGAAAA ATATTTTTTCGTCAATTTCGCGAAAGTAAATGTCGTCAATTTCGCGATTT TTCGTCCTCGCGAAAGTTTTTGCTCGCGAAAGTTTGTACGTCTAAAGTAG TTTCTTATTTGTGTTGATTTGATATATTTGCTTTATTTGCGTTAAAGGGT GGAGTGTCGTTTATCTTTGTGAAAGGAATGATCAAGATCTACTACAGGCA ACATCAATACGTTCGTTTGGCCAAGCGCAAAATCGAGGATTTCCAAGGGT CGACCAGCGTCTAAAACTTGTAAGCAACAGTACACAGATAGTTATAAGAA GCATTGTATTGAGAACTGGTAGGTGATTTTCATGAGCCTGGATTTTGTGA GATTTGTATACAAAGACTACAAACATCATATATCCATTTCGAAAAAAGAA AAAAAAAACTTACTGTCATAAGATATTTGATTGGTCATAATTATCTTTAA AAAGGTTTATTTGTAAATAGAGTACTAGAATTTGAGCCAGTAAGGTCCCA TCTCCAAAAAATGTTTATATGATTATTTGTTTTTTTTGCTGAATTTTGCA ATACACAAACCTAGTGAACCTCTACAAATAGACAAGAGACCTGAGAAACT CTTTCACCCTCAAATTTCGGAAAGCTTTTCGAAATTTCACATATCCTCAA AGACAAAACCATTATCAAATTTGCCGAAAATATTTACAAAAAGATACACT TTTAGATTTTTTATAAAATGAAAACAACCGAAAGTATTTTACTATCTAAA AGAAAAGTTTTGTAGATAATCTAATTTTTGGGAGCGATAGCCCCTGATAC GGGGGGGGGGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060971TCONS_00060971Clytia hemisphaericatranscript
TCONS_00060970TCONS_00060970Clytia hemisphaericatranscript
TCONS_00060969TCONS_00060969Clytia hemisphaericatranscript
TCONS_00060968TCONS_00060968Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060970-proteinTCONS_00060970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:125217..133929 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MARCH5E3 ubiquitin-protein ligase MARCH5 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.2 14.29 17.07 17.07 32.95 23.51 35.61 33.24 43.41 38.56 57.27 63.64 86.36 102.74 58.52 55.88 40.53 48.87 81.12 76.21 54.87 52.39 39.97 50.73 72.19 75.98 52.82 74.48 31.94 32.89