XLOC_038513 (gene) - C. hemisphaerica

Overview
NameXLOC_038513
Unique NameXLOC_038513
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:132435..137559+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038513 ID=XLOC_038513|Name=XLOC_038513|organism=Clytia hemisphaerica|type=gene|length=5125bp|location=Sequence derived from alignment at scaffold_358:132435..137559+ (Clytia hemisphaerica)
TTAGAATTGAAATTAAACAAATACAAAGTAGTGAAAATAAAAGTATAAAC AATATGTATAGTTTTGATGGCAAACATAAATCAAGAACAAAAGTCTCTCT TGGTGGCGCATCTAAACAGGTATAAGGGTTTTGCTTCATTCTATTTAATT TCGAATCAAAATGAATGAAACAACATAgtgatttgaaaaaatatcagaat attttctttgaaataccAGATACCCAATAATTTTACCATCATATCAGAAG CCTCCTCAAACGCTTAGTCTGGTGgtaaaaatgaactttttttgCAATAA CCTTTAACATCTTATCAATAAGGGAAATTGGAAATTTCCCCAGCTGTCTC GCAGTAAGAAAAAGTCAATCAAGATTAGAAACTTAAtcgtcttttttctt ttttctatgtTATTTTTAGGTTGGAAAAAAAGCTCTTATCGAATCTGCAA GAGAAGAAAGATTGAAAAGAGAGGTATGAGAGACaccactttatattttt ttggaaagtatACATTTTATAATTTTGGACTGTTTTTGATACAACCACAT GACTTTGTATTTACTCTATATCTATAATATCTAATCTATCCTTGCAATGT CATCAGTAACATGAGTACACAGGGGTACACACTTTTGTTTAAATTGTTCG CTGGGTCACATTGTTCAAGACCCTTCAACTCTCATTCCCATCCTATTCCT CCTAAGCTTGCTCATGTCACCCAAAACTCCTTAAAGTATTTGAGGCATTA AAAGGTTTGATAATTATTGTATGTTAAAATTTACGATTCCACCAAGTTTG TCAATTAGGGATTTCTTGAAGCCTTATTTTAAAAATGTGCCTCTGTTTAT CCCCCTAAAGCTATCCAGGAAGCAAAATGAAGCAGCGATCAAGATTCAAG GGTGGACTAGAAGCTGTTTCGTTCAAAAGAGTTTGGTATGTGGAATATTT TTCttctcttataaataaatattatatcataagtttattttatattgtaT TTTGTCAATATCTCTTGTCAATAGCACTCTTTAAGTTCGTATTAGATGTT TAGGCTATTTTATAGGGAATGAAAAAAATGGCAGTGAATTAGGATgttgg agcaagattttttgatttctaaGAGTGACAAGTTATGTTAAAACCTTTTT GTCCTCAACTTTAAAATTTCTATGGATTATTTAGATGGTATTTGAATTGA TTATTTagaattgtttaaaatttttgtttacttcagagTAACAATTTTCG TGACAGTTTCGATAAAGCGTTAGAAAATAATGCTGATCTCACTGGTATCA CCATTGCATCAAAGCTGATTTATTTCTTCTATAACACTGAATTGGATTAT CAAAGACTGGTATAATGACTTTAATTattgttttcactttcatttttttc tccagttgTGGACCTTATCattaagctctagtttagacggctgaCTTTCT GcactgcctattctaattgttagagtaggcaaaaaGAGGGAACAAAGTTg gtttttaaaatctttgcttggaaaggtttgaaagaagacattgcattgac gtcaaacaAGGGCTATGCATCGACTTTAGACAGCGAACTAACTGCcctct ttaattcacaattagaataggcagggcaaaaagtgggccgtctaaactag agctaaggcATCCAACATTCAGGAATGACATTTTGATGGAATCGTTCTCA AGTGTCGTTTGTCAGCTGTatgcactgacctttatataccctggacacaG TTTCTTGATCCCGGTCAAGCAAAATTCtttgattgcaattttttttagaC CTAAGTAGTATCATAATTAGTACcttaatggtagcactactaaGTGTCCA AACTCAATGAAATGCAAATTAACCTACTTTGAGTACCACTACAACTTTAT AAAAACTCTGATAGCCGATATAGCTTGGGCCAGGGTATATGAAAGTCAGT GGCTGTATGTTTTGCTGCACGACCAAGGTCTTTTTTGAAGGCTTCTCCAA GGTGTTCTTTTACGTTTGCCTTTACTACCTTTGTAGATGCCAAAAAAGCT TTATTCTGGTATGAAGCAGTCCTTTCTTAACTCATAAAGTGTGGTCTGTT TGTATTCTCAACGCTCTCCTTTGTTTATTTAGTGTGGTTATGCAAGGGGA AATCCCCTGAAATCCTCTCTAGATCTTGAACAGACCCGTATTTGCTTGTT NTGGATTATTTAGATGGTATTTGAATTGATTATTTagaattgtttaaaat ttttgtttacttcagagCAACAATTTTCGTGACAGTTTCGATAAAGCGTT AGAAAATAATGCTGATCTCACTGGTATCACCATTGCATCAAAACTGATTT ATTTCTTCTATAACACTGAATTGGATTATCAAAGACTGGTATAATGACTT TAATTattgttttcactttcatttttttctccagtaGTGGACCTTATCat taagctctagtttagacggccgactttctgcactgcctattctaattgtt agagtaggcaaaaagagggcacaaagttggttgttaaaatctttgcttgg aataGCTAAGGCATCCAACATTCAGGAGTGACATTTTGATGGAATCGTTC TCAAGTGTCGTTTGTCAGCTGTatgcactgacctttatataccctggaca caGTTTCTTGATCCCGGTCAAGCAAAATTCtttgattgcaatttttttta gaCCTAAGTAGTATCATAATTAGTACcttaatggtagcactactaaGTGT CCAAACTCAATGAAATGCAAATTAACCTACTTTGAGTACCACTACAACTT TATAAAAACTCTGATAGCCGATATAGCTTGGGCCAGGGTATATGAAAGTC AGTGGCTGTATGTTTTGCTGCACGACCAAGGTCTTTTTTGAAGGCTTCTC CAAGGTGTTCTTTTACGTTTGCCTTTACTACCTTTGTAGATGCCAAAAAA GCTTTATTCTGGTATGAAGCAGTCCTTTCTTAACTCATAAAGTGTGGTCT GTTTGTATTCTCAACGCTCTCCTTTGTTTATTTAGTGTGGTTATGCAAGG GGAAATCCCCTGAAATCCTCTCTAGATCTTGAACAGACCCGTATTTGCTT GTTATAATCAAAGGCAACTGTTATCCATCGTTGTTTTAGTGactcatttt tttctctttcaggtACTTTTATCACAAAAGCTGTTGAAATTGGCTTCAAG TAAACAGATTCAAACGTTGTTTTCAAGCAATTCTGACGAATGGTTTCACC GTTTGAAACGTGTTCTAGTTGTCTGCTCAAGGTAGATATGGTTGTCATCA CCAGTGATCTTTCTTATAGTGTACTATGCTTTCATATACCTTGGACCAAG CTTTATGCATCATCTCAtgctaatggtagcactactcgatATGGGTCAAC TTATAattccatgaaattttctgtttgatttttttttcatccatTGATGA GTAGTGCTTCCATTAGGGTACAACTTTCAAAAGATTCTGATCAAAGACTT TAATTTGGTAGGATCGAGAAACCTTGTCCAATGTATAAAAAGATCAGTGG TTATCCTCCAAGCAACTGAAGCTGGGTGTCCACTGAAAAATAATAAGTTC GTCGCAAATACCTGTTGATAAAAAGGTTTTTAATTCGACGAACAAATTCG CGACGAACTTATTTTTTCCCAGTGGACACCCATctttataattttaaaaa caaatgataaaaacTCTGGTAGCCAAATTCTGTGTCAAAAAGGTgtgcag tgtttttatttttggccgaaactttcaaacatttttcaagttataaaaaa gttggtatcgttggaaagatattttttttttaaaattcgttcaagaaagt gaagaaaatgaagaagacaaaaatgaacttcttgTAGAAAAGCGCTGTAT TTACTATTTTTACAAGAATGaaacttcaatcttagatcagcAATagtgtg aaaaatattttcaaaaatttcaatccAATCAAATGATATAAAAGAAAGTT TGTCTCTGCTCGACcacaaaaaacagcaaaaaacactTATTTTAGGGGTC AATCAGTTGAACACTTTGTTTAATATATTTTGAGggaattaatatttttt taaagatcttttCATCGTTATTTCCTAAAATCAATTTCTTCGCCTTGCGA CACCATATCTTTAATCATTTATGTTTATCTGTTTAGGACTTTATCATCAT CAGGTGATAGGAACGTCTCCATACCTTTGAGAATGTTGGAAGTGTTCACC AGCTTAAAAACATATGAATGGCTACCTTCAGAAGAAAACCAAATGAAAAC TGTCTTCTCCATCACATCTCATCTTACAACCAAAGGTATAAACCAGCATA ACCTGTCAACCCGGTCAATTTTTTGGGGAACTGGTAATGAATTTATAAGG AACATTTGTTCCTGGCGAACAGTATTTTTAGGCTGCCTTTTAAACAAACC AAACTAATTCACGTCAAAACTTTGAAGACACTTTCCCATGCCTCTGTGGT GGAGTGCAAACCTTTTTAGCTTTTAtagtagttttttttttgtattcgaa tatttctactCAATAGTGTTACTTTATCACTTCAATTCATAAAGGTATCT TACATTTTTCACAAGAGCGATTGTATACTTGTGTTTTCAATACCGTCTTC GAATGAAATTTTCCATGTAACTTCATTACCAGTCTCCTCAAAAGCTGACC GGGTCGCTAAGGGTTAAATAGTTGTATTCAACCCAATACACCCagttttg agaacattttaaatttgtcgttgttgaaaaattacaaaaagttctgaaaa gtattcaaaaaatgatgaaaatcactgattttacTACCATAATATTCCAa aaactttctcaaattttcaagttgtactaaaaggattttaaatattttgg gtATGCCACCACCTCACTAAACAATTGATGCAATTGATTATGCAATTAAA CAAGatgcaatttttactttttcaggtTATTTCAGTCAAATGAGGCAACT TCTGATCACACGAGTACCAGATAGCCTGGAGCCGTCATCTCATCCACCAA CACCACTAGCCGGTGCTATCAAAGACCTCATTATGAAACCATTGGAATTA GTAATGGGAGACAGCCCATTATCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061377TCONS_00061377Clytia hemisphaericatranscript
TCONS_00061378TCONS_00061378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061378-proteinTCONS_00061378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:132435..137559 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.67 3.52 2.7 2.3 10.81 9.13 9.44 8.98 6.24 7.66 6.94 4.56 6.71 4.86 6.04 7.19 6.38 7.06 4.55 6.26 6.39 8.57 6.03 7.27 9.39 11.84 3.35 2.95 4.89 5.53