XLOC_038514 (gene) - C. hemisphaerica

Overview
NameXLOC_038514
Unique NameXLOC_038514
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:140076..146837+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038514 ID=XLOC_038514|Name=XLOC_038514|organism=Clytia hemisphaerica|type=gene|length=6762bp|location=Sequence derived from alignment at scaffold_358:140076..146837+ (Clytia hemisphaerica)
CATGATTTATTCATCATTCATCGAAAGTATATTAGCACACCCGATGACAG AGCAAGTTTGTTTTTTCCTTGTTCCTGCAATCTCACCGAAGCTTTCTTTG CAGACGTTGTCGAAAGTCTTGGTGACAATGGATGAAGAGAAGATTCAAAG TGTTTGGATGTTATATTCTCTGTTATCCATTATTGAACAGAATCAAGGTA TGTCCACTAACCTTAAACAGTTGACTCCGGTCAAAGTTTCCAAGCCGcct aagcaaaatctttgatctgattttttgaaagtggtatccGAACGGTAGTA ATGATACCATTATTTCAAGGCTAGAGATAAACCTATATTAGGCTACGcta tatcttccttcgtttctcgtaaaactcctactcttcgggatatgagcact gctcttgttttgaatattgaatttctccAGATACATCGCATGCACACTGA GGTTTTGATGAAACAaaagagagtttcgaaacctaagccaatcagctgtg tttgaaacattcttttattttaaatctctattgataaacttcttttgttt aaaacttCTGTAGTTATGTTTAATCCTATTAATAGGTGAATTCTCTGTGg aggtcactagtggccgcccatagcagtgcctatagacaagagtaaggcct aaaaaaCTGTaactgtctattgtgtagactaaacCTTTAACTATACCTGT ACTGGCCTGTACTACTGTATTTTTTTTCTATCCAAATTctattttttctc tctttacTGTGACAGATAATGCTATGGATTTTGAAACGACACTGAACTGC ACTAAAGCTCTTCGGATCATGATTGACCAATTAAGACCCAGAAAAGGTAT TTTCTTAGATTCGCGCACGCATCCTTGTTTACGATGAGTAAAAAAGGCCA TTCCAAGAAATTGTCAACCATCGATTGAATCGCCTCTATGGGTGCTATCA AATATTACATGGGTCGCGGTGATCCTAGGTCCTTGCAGGTGGTATGTGGA TGACACTGTTAAGTGAATTTGATGAAAAACGCCATCTTGTCTATTTTCTT TTGCTTTCGATCATAAAAAATCCACTTTAAGGATGCagatattttttgtc aaaatagaATAATTATTAAATCTGTGTTTCCATTCTAAATTTATTATTCA AATCTTaggtttttgttgttttttaaatgTTGATCTTTTCAAGTTGTCCT TGTTTTTCCCCTCAGACAAAGAACGTACCGGACAAGTAGAGACATCGGAC TCTTCGGACGAAAGTAGCGACGAAGATGAATCTGAACTAATGGAGCTCGG TGAAACCGAACCTATCGTATGTTTTCGTATAACTTATCGGTATAAAATCA TNATGGAGCTTGGTGAAACCGAACCTATCGTATGTTTTCGTATAACTTAT CGGTATAAAATCATCGGAAAAAAGTGACGACATTttttaccgacgaattt tcttcgtcgACAATTATTTTTGACCGACAATTTAAATTGGCCGGCAGACC ATAATTATTGCAGTACACGCCTCGACCCGAAGAATATATTTTCAGCATTA CATCATCTAATGTCTAAAttgtaaaagttattttcgTTTTGTTTGATGCC TTTCTAAAATCATAGCGTTATTCCGGAAAAACGTAAACCACGATTGGAGA TTGTACCGACTCTTTGACTGCTATTAAATGATAGGCGTTATTGATAGTAT CCAGTCAAAAATATAGCAAATATACCTCGAATAACTGCATATTTATCCTC ACAATATTTTGATCTTTTAGCCTGAAAGTCATTGTCAAAGATATGTTTCT CACAAATGTGTGGAGCTGATGAGTGAGAAGTTTTTGATATCACCCTGTCT CACTCTACTGTCAAAGTAAGTGCAcgtaacattttcaaatttgaattctA GAGGAGGTTCTAGCTGTAGGTTTCTCGTAAACTACATACAGGGAGATGGA GCCAAACCTTAGTGCCAGtagcgtagataagaatggcGTAAAACTTTATT AGGAGAACAGCtctttatgacacagtaattgtgtgccataaaaatctgct ctcctacacaaatttcgCGCCCTCTTCTCTACACTATTAGTAACCTGAAC CTACCCTAAACTTAATGAACCGGATACTGATATACCTGACCGCGACTCCT AGTGGCAGTTTAGTTTGTCTCGCCTGCAGTCGGGCAAGGATAATGAGGTT TTTAACCAAATCAAAGTAAGCCAAAAAGGAATTTATGGAATCAACTCCCA GAAATAAAATACTCCAAGGCTTTCGAATTAAAGGAGAAATTTacttaaaa aatcttcttttatcTTCTAGGGGATTGCAAAAAAACAAGTCACTTCGCTC ACAACTACTTATCGATATATGCCATATCTCTCATCACATGCTATACACAC TGAATACGCCAGTACAGAAGTCTGAGTTCCTTTACTCGCTGGCTTTCTCT AAATACTTTCTGCGATTGACGTGGTATGAATTGCTTGCATTGGAAACCTA TACGAATACTGGGTAAGTGAGGTGTATTTTGTAAAGGTCTTATATTGAAC AATACTACCTGTCCCTATCCCACTGTCCCTATCCCACTAAAGCGCTTTTT AGGTTTGTCGGTCTCTCACGTTTTACCACTGATTTTTATATACCTTGGAC AAAGATATTTTCGCCATCTATGatcgaatttttttataaaagtagTACCC TAATGATAGCACTACTCGGTGTGGGTCAATTTATAATTCAATGAAATTGT TCGTTTAAAAGTCTTTTATCCTCACTGAGTAGTGCTACCGTTCGGGCACC AGTTTCAAAAAGTGGTTCTTTTCTTGGCCGGAATCGGGAAACTGTGTCCA TCGAGTCCAAACTTTtagtaaattttttatttttttattttacgacAACA GGAAAACGGTCCAACTCTTGCACCAATTAGCTCACGGGAATGCGATGACG TCACAAGATGAGCAACGCGTCATACCGATGTTGAGTGTCTACACAACGCT CCTTCGTTACGCAATGTTTTCCATCTATGATACCGATTTCTACAGTGGTA GGATAATTGTGTTTACgctttctttattaaaagattATCTTTAAAATCGA ATTAATGATCTTCAGCGGTATTATTTTACTTTGAGTTATTTCCTTGTCTG TCACTCTCCAAATTTTGGACTGACTTTCGAGCTGATTGTTGTTTTTACCT GGATTGACATCTTCTTACCACCAAACACAAAATACTAGTTCAATCTTCAT AAAAGTTTCTTTATCGATTGTAATTTTATTGACAGCTTATTTAAAAATGA CTCTTTACCgcattttaattcaaaattgaaatatatttatccatttttcc aatttaatTGTTAGACAATACGAAATCAACACTGATGCCGTTCCGCATTA CGGAAGTCATTGAAATGTCCCGTATCTTACGTGACGTGGTGCTAGGCTTG ATTGTCTTCATGTATCCGGACATCAAAATGATCACCACATCGGCTCAACA AAAACAATGGCATACGCTGTGCAGGGTAAGAAATTAATACTTGTTTTTTC CTAATTATTCATCGCAGTTGGCACTCTCTAATTCGCCGTTCTAAAtccta tttcaaattagctggcagtgtttttttcgaacctcaataacttttgatag aatttgaattaagtagcggtttgtgcttgttgaaaagataatctggagtg gaatattatcaaaaaagaaaaaaattcaaaaaatggaaaaacgaagatga aaaatgaaaaagaagaaaatcaacttcttgtagaataatgctacgatctt tatttttgtatcagaaattcttcaatcttagaacatcatgaatgcgaaaa aatattgaaaaaatattcattcaatcaaaaaatacatCCTCAAACGTTGC CCTGGTTGACTTAAAAAGgactcttttttgttgttttttgatgatttttg atatcaatcattgataaactttggactatatctttcgatggaataaattt ttttgagaatttttttcacattaatgatgttctaagatcaaagaatcact cgtgtgaaaataataattatagcacaattattaaagaagttgattttttt cttcttcattttcaatcttcatatcattttccaatttttttgagtttatt CTTTATGGCAATAtcccactcctgtttgtctttttaatagactttaatat tcgataagctccattattcgataatattgaaagtcgccgtcaacaagaaa ctctctcAAGCGACGCGCTCTTCCATTCGActcatttttgataaaaatcc aaTGCCCGCTGAAAACCGAATTTGAGAGCGTATTTTCGTGAATAAGCGCT CTTTGAACTTTCAAGGCTGCGAAGAACGAGAACGAAGTCtcttttggttt attttttttacgAGAAAAGCCAGACAAGATGGCTAAGTTTTCTCCTTTaa tgtatttcaaatttttgagtaAGCATATTTTATCGTGTTATTTTCGCGGT CCTTGTTACGGGACAAGCCAATCTGGACCGATACAATACTTGAGTTACGG CCAATCCATGACTGTCAATctcgaaaaaaatttattaactCTCTTTTTTA GAGTGTTACTTTACTCGTGAAACAACTGTACGCGCGTGATTCTCGGCGTC GCTTTTGTCCCGAACACCATTGGCTATCTAACCGAGCGGCAATTAGTCac gaaacaatgaaaatcaatttctttGTGGACAATGATGACGATGAAATGGA TGTTGAAAGTGATTTCTCGAAAGACCATCTTTTCAAACCTGGCCTTTCAA CGTTAAATGCACGTAACGTCGCTATTTTGGAATACGTCCCATTTGCAGTA CCGTTTCTACAACGCGTTCTTGTAAGTAGTGTTATTATTTTAATTCGCTC CCCCCTTCTTCTCTTATTCGATATTCTAGTGATTAAGAAATTTTCTTCGA GTGTTACACGAAGTAGGCTGAAAATAAAGTTCAAATTACTAAAGATTTGA GTTGTAGATGTTCAGAGAGAGTTGGTTGTTTGCTCTACAACGGCTCCACA ATTGTCTTGAGAAATTTCTATACGCCTTTCAACCTTTAACGGCGTGATCA GCTTTTGAGGGGACTGGTAAtaaatttacaaagaaaatattttctcagAA ATCTCTTAAAACCTGTATTTCTataattgggctattccaaaaatagtctg taccccctatattgaggaggtgtgacgtccagtgtggatttgaaaataaa aaatccagggcgATCTGGTTTCtcgagtgtaaaaatccaggtTGTATAGT TAAAATGAAGTGGAAACGGGTCAGTAAAACGGGGTCAAAATCCAGGTTGG TccaaaaaatacgaaaaaaataCTAGGGAAGGAGGtcttgaaaaattgat aaaaaaacccaggggtcacctttcccaaaaaagacctcctcaacataagG GTAAAAtcattttctggaatagcccatttgaACTGATTCTCGGTTCTCTT CAAGAGAAAACCGTTGAAGAATTTTATATTATCGTCTTAAAGTATATCTA TTCATGAGTCTGTTTACTTATTCTGCAAAAACATTCCACAACTCCATTAA AAACGACAACTCATTTCAATTCTTATTCGACACTGTCCAGTCAAAACATT GTAAACtctctggtcattaaaatgttatattaaaGTGAAGAAACTACTGA GGTTAAGGAttccaggataatcacgacgacggacgaaaaaggtaataggc tagtgaaaatacgaaatttgattggttgaaactcactagcctgttaaatt ttcgttcgccGTCGTGCgctatcttttgttttgatgattggttgaataaC TGCAATCTTTATGCAAGCTCCGCGTTTTTGaagcagcgattcagacctcG GAAAACATAATGTCTCTAATGTTTTCCTGTTTTAACAACAGATATTCCAA CGTATCATACAAGAGGATaagaaaaacaaccaaacaCCTGAACAAGCATT TATTTCGGGTGGTGGAGTCGAAAGTCTTACAATTAACCGAAAATACCTGT ACCAAGACGCTTTTGATCAATTATCAAAGGAACGCCGTGCGGACATCAAG CAAGTAGTTCGCGTGCAAATGATCAACGCGCAAGGCTTAGATGAAGCTGG GATAGATGGGGGTGGTGTATTCAGGTTAGTTGCTTTCATTTCATCATcga tttacaaaaataattaaattctATGCTTGGTTCCAATCCGAAATAGCATT TTGTTCTTTATTGTTCTTTATTGCTATGACTCATCAATAAAGCATATCCC TTAGAACCATTCCCCTTTTAAAGATTACCTTAAAATGGAACAAATTTTTG CCcgaaaagaaaacttgaaaaagtAGGAATAAggattttttcatgatttt tgtggGCGAAATTGAGCGGAGAGTTGATTTTGGCGAGAATTGATTAAAAT GGTCTCTTATCCCTTTCCCTCTTTTACCTAGGTGCAGCTAATTATTGAGT TGACGCAAGAACTAAGACTTTTTTCTAATAATCTTGTCCtaaccccggct cgaaccaccaaagtAGTCTTATCAGTGATTCGAAACCCGACTTGCAAACC ACTAGGCTACCGAGCTGCTGAAAATAACGGTGCGCCACCCGTGCGTGCCC GCTCGCTCTATATGAGCGCTGCACGCAATACTTGCGTTAACTCAGAATTT GGGGTTCTCTTTTACCTCAACAGGGAGTTTATGTCGCAATTCATCAAAGA AGCTTACGATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061379TCONS_00061379Clytia hemisphaericatranscript
TCONS_00061380TCONS_00061380Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061379-proteinTCONS_00061379-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:140076..146837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.24 2.97 2.65 2.89 12.05 9.06 8.91 9.94 7.33 7.96 7.23 6.06 6.05 6.15 6.28 8.68 8.81 9.96 5.54 7.24 5.36 7.11 4.86 6.54 13.01 12.81 4.13 4.03 5.04 3.87