XLOC_038519 (gene) - C. hemisphaerica

Overview
NameXLOC_038519
Unique NameXLOC_038519
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:291137..299814+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038519 ID=XLOC_038519|Name=XLOC_038519|organism=Clytia hemisphaerica|type=gene|length=8678bp|location=Sequence derived from alignment at scaffold_358:291137..299814+ (Clytia hemisphaerica)
GGCAATTTAACAGTATGATGTTTTGAGGTATGAATATTAGTTTAgaacat tttcgaaaaagtctatGACCCACATTGAGATTTTATTGACTCAAAAGTAG AGCAAGAACATCTTACAGTCTTACGGTATTACAGACTGACGACATAGCAA GAACAGAAGAAGAAAATATCATAAAAGCTAAATTGAAAGAACGTCACAAT GATTGCAGACTTTATAATATGTTGGTAAGAAAATAAAACTAAGATGTAGC ATACTTTTTTGGTAATTATAATGTATCAGAGTTATTGATTTCAAAGGCCA AAATAAAAAGTAGaaggttggcagacgatatcatactccaggatgcaagt gaaatttttcaatccgcggacctagacgggggttcggttattatcagtta gggttagggttggagctcgagagtcacaatataaggccgaaggccttctt aggggcattcgtaccctgtgacttaacttacgatcccgtagggatccttg taggggcaccggtagggttgggagctttcttaattaaggtctgtaaatta cacgctataagtatttgtgaatgacggCCTTCTGGTGTGTCTCGTTGGCG TAAGCAGTAAGGCATCGGGTTTGTAAACAAAGgatgcttgcatttggtgg ttcgagccggggtcggagacctgtttcaccggtacgggcaaatttcagaa aaatacttagaaaacagttagaaacacttgagaaaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNacagttagaaacacttgagaaagacagaaaatcagg atagaagataggaaagtagaaaatagggagaaaataagagacgatgcatc ctggagtatgatatcgtggTCTATTGGCCAAAGCCCCAAGAAAATTATGC CTTTTTGCAGAATTGAGTGCTATAATATCAAATATTTGAAgacatttttc actcatttacCTTTTTCCATagctaattttatttttcataaagtttGAGT TCCAAAACTCAATTAAAGATTCAGTTTCTGCTACCGTTATCCGAtaggtt ggcagacgatatcatccaccaggatgcaagtgaaatttttcaatctgcgg acctagacgggggttcggtattatcagttagggttagggttggagctcga gagtcacaatataaggccgaaggccttcttaggggcatccgTACCCTGAG ACctaacttaggatcccgtaggtctgtaaattacacgctataagtatttg tgaatgacagctttCTGCCGTGTCTCGCTGGCACGAGCGGTTAGGCAtcg ggtttgtaaaccaaggttgcttgcatttggtggtttgAGGCGGGTCGGAG ACCCATttccaaatttcagaaaaatacttagaaaacagttagaaacactt gagaaagtcagaaagtcaggatagaagataggaaagtagaaaatataggg ggaaaataagagaggatgcatcctgtggatgatatcgtttgccaacctaT CCGGTAGCAGAAAACCCCTGGAAATATGCCTGCTACcttgagattgggta acttgtatcagtggaggcaaacatgcatagccctaaaatgaatgacctgt ctggtcagggagggggtcagtgtaccagaaggtggcatgtatcctggggt gggtgggtgtttgagaaaaaaatttgtcatgtaccacctgtgtactataa ttggggtgttgggtccaaaatcgattttgatttttactacatgtgtacca aaataggggtgttgggtccaaaatcgatgttaAAAGTATGAAAACAAAAA GGTTCAGAAATtatctgctaaaatagaaatgtaaagttgttctattataa attgatcaagccaagtttgtccaagatcattcttccaaacttcttggaat gaattgaaatctgaccagatcccactgaaatgaaggtttatcgagtcaat gtaaacattctaacattcaaattcgaacattcgaacatcagaggtgccaa ctctcacacATGGGGTGTGAGACTCACgcatttccacatggtctcacgca atttttgaaaagtttgatttctcacgcattttggatttttgagaaaaatt ctcctgtttttacaatttttggaaaaaagttttcccgatttcccgatatc CCGAGTTTCCGAAAAAAGTTTCCTCGATTTcccaatttttgtaaaaatgt ttacccgattttccgattttttccaGGTAGTACCCAGTACGCAGTAGTAA ATGGGGGTTTTGGgttggttttgtttttttttccaggtactacccggtag taaataggcggtatggggtggttttgggatttttccatgtagtatggtgt acttcaggggtgggtgtcaagttttgaaaaataccttgtagtacacatac atgccgccttctagtacactgaccccccccctggtctggtcattaaaata caactacgcagctctgctcgcggCTCTACTCtaccaattttgttttgatt caactttgtattttaatgaccagccaagtctttcatttgagggctataca TTTTAGCCTCCATTGAAGCAAGTTACCCCATCTCATGGTATAGTGTGAAA TTTTTGTTCTTTCACATTGgctgtttataaaaaaaattgcccGTCACCTG ACCAACCGTATCGTAtatatctttttcaaaaaaattaggtttCAGAGGGT TGGGAAGCTCGTTCCAATCTACTTGAACTTCATCATCACCCTCCACAGTT TTTTACAAAGCTGGCATTGGACGTGAGACTCACGCATTTCAACAATGTCT CACATAgctttttaaaagtttgatttctcatgcatttttgatatttggaa aaatttccttctttttccaattttttgaaaaaagttttccagattttctg attttcaaaaaagatttccctgattttctgattttctgaaaaatcttttc ccaatttctgattttttggaaaGACATTTCTGATTTCCGATATCGGGAAA TCTCACGCAAAATGAACATCTCAAGTTGGCAGGTCTGCCAAACCCTTTTT TAAGAATTGAGGTGACAGGAACTAAACTATTTTTTACAAACAGCCATTTT CCAGGCAAtgtataaaataaatttcatagcCAAAACATACGTCAGCTAGT TGATAATATAATGTAACCTGTGCCTCAATAAACTCAAGGAACATATgggt aaaggccacatttttggtacactgtcccttccgttacgttTTTTCTCTAG GGCATAAAACCTACTCAAAAAGTTAACTTCATCACATTATCCCCAAAAGA GGAGACTTTTGCATCAGATTTAATCATGATATCGTGTATCTATTGCCCAG CAagcaaatttttctaaaatgtacAGTTTGGTACCCTGattttgtccctt ccgttacgctagttacttttagtcaaaatttcCTAGTCAAGTTTACTTGT TGGGCCTCTTCttgtcagtttattattgggATGTTCCTAGATTCCATTTT CATTCCATTGTATATgcactgatgatgttttttaataaaacgaaaagctt atgctgaaaaatatttgttgaaatgttttttgaataataattaattttct ggctattttattaCAACAATTTTCATgctctcatctaatttctaagctca gttttttcaaaatttgtgccTGACATGGGAGATAGGACTCACCaaatttg tcccttccgttacgcatGTATGATTTGGAATATTTAGTCAACTGATTCGC AAGACTCATTTTCCTTTGGTGTAGTTTCTATACCCATAGGACTACTTATT GTCACAAAAACATTTCTGAATTAGAATTTTTCTCATGGAGATACTGTGAA GTGAATCTTGTTGTCCCTTCCGTAACgaatgtcccttccgttacggcatt tttttataaatgctaatataataaaaattctgagactattttgttttttc tgttcaaaaCTAAGGtatttgaagacattgcaatgtgtTTCAAGCTGAAA AGGATTGAAACACTTCAATgacatttgatgaaaaataagcAGAAAAGTGT CCCTTCTGTTACGTTTTTATCATTTAGTTGGTATTTTATGATAGTATCTA TCATAGTAATCATAGTTTTGGTAGATTTGTTAGACCCTTTGGTTAGCTTC CTTCTATTATACCCAAAAAAGATGTTCCATcgttaaaaataagttaaata tttaaaaaaaaagacatattaCAAAATAATTTACACATCAACTGATaatt tgtcccttccgttacacAAAATACACTCTaccgtcaacttgaaaaatatt tattcaaaatttatcaGTGGGATTGATTAAACAACTCTGAAGAAGCATTT TTCAATAAGTGTCTTTCTTGAAATTGCAATATATAGGGAGAAACACCTAG TCTCCATTGGTTTATTGATAAGGGTTAAAAACTTGACCGGGTGGCAATTA GAGCTACAAACCTTTTATAAAACAATGTTATTGAGGGGCACGCAATTGAT TATTATGGTAGAACCATTACTTAAtacaaataaataagttaagaaGCTTT TTGAGGATAAATGTTTTTTAGTGTAACTGAAGGGacaggtgtaccaaaaa tgtggcctttacccATATGTGGATCTTTTATACCAATGAATGCTTTCAAT ATAAAACGTTTTTGAAGGGTGTACAAAAACTGCAAAGAGaacttcagaaa aaccaaaagtaaGATCCAATTTTTCTGAAGAGTAATTTTGATAATGTTTC TGTGTTCAATAGCAATAGATTTGACCAATTTAACATTACCAAAAGTATTC attaaatatgaaaaaaaaatctccaTGAAGAGTCagtgaaatgagtttct ttgtATCTATTACATGaaagtttcttttatttttccattacAGTACACTA TTGATTAATGCTGGTGCAATTCTCAATTTTAAGTTGTAAgtcaaaatttt atttgtttgttgCATTTTACTGTTAAGTTACCTTTAGTGATTCAATTTTT AATCATCATAAAAGTTATATACTACTTATAAACATTGCTTTGTCCATCAT AATGCGAACCCTCTCCTTATACTCCTTTAAAGCCAAAATCCCTTGAAATT AAGGTTTTTGACCTTCactttaaaaactttatttcatagaaagaagaaaa gtgGAGAAACCTTTGGTGAAGAGGAGCCCAGTGCTAGTATGAGtttataa ttcttttttcattgtttcttgAGATCTGCATCACTTCTCTCCACACAGTG TTCACAGTTGCAAGAACATTTTTGTTGTGTAGAATAGTACTTGTATTACT TGTTTTAGATTAGATATCATTAAATTGAATTTGGTccaggggggggcacg cagttactacaagacagtatgacacttactaccgtggtggtactgtattc agaagttatgaaaacagttactacacagtgtagtaactgctgtttggggg tggtgccaaacatttttggtgtagtaagtgcttatattttaattcttttt aaagaactttcaaaatttttcacaaaaaatgaatttctttgtgaaaaaat tctttgttaaaaaaaatatttttgttataaatggacgaaaaaaaatttga aatttttctcagacccaactttgaaattatgctctccctaattatcatta aaatgttctcaacagctgttaaccaagtaaattaaaagaaaatctagcac aaaaatggctttaggttgaaaaataatcgcaattNNNNNNNNNNNNNNNN NNNNNNNNNNNNNGGGTAATTTCGaggatgtttttgatgatatcactcaa aaacaggggtggtacctggaaatcttttctgaaaacagttactaccaagg tgtagtaactgcaaagggtgatggtcctgaaaaaaagtgttgaaaaagca cttactacacatcatgtcttgtagtaactgcgtgcccccccctgtttggt cttgaaaaaaatctgttttcAATTATATAAGGTAAATGCAAAGGATAGTG TCTCTATGGACCCAATTTCCATTAAAAAATATGTTCACATGAATTGTTGT ATTATCAATTAaccttttttcattggctgctttGCCCTCTTTTTATTCAG TATCACGACCATAGCATACTgtaattgggcttttccattAAAATCCATAT AGAGAGGTGgaagaacattttcaattccattattattattattatttgag aTATGNcggattcttccagtcgtttatacaaactaaatcccgtattatta ttattatttgagatatattttgataatgtttCGATAATGCactatttata aaagttttccTTCTATCGAAGATAGATTAGgtacactttttctattgtaa taTTAGAACAAGAActaaaaaataggaaaaattgaatattaagTCTCGAT GGAATATCTTAgtaaacaattttgtaaatatcttAATAACTTAccgagaa atttttcaaagtcttgCAAAACTATCATTTTgcatttctgaaaaatttgt cgCTTTCCAAGGCGTCTCATGGAAAACCAAAGTAATTTAGATGAGACTTA GCAAATAGAATCcggtttattattattattgttattattattgttattaa tgtaataaaaaattctttttatacCTTAAAGTGTGGCACTGAACGAACTA AAACCAGTCCTTTATTCCCTGGAGACTTACGAATAACTTTTTACaccctg gaaaatgaaaaaacactgtgtggatataaaatagaatggcccattgtatc atttgttttatgattTGAGTTTTGTCAAAAGATTCTGGAAAGCAGTGATG TTTTAATGTAATAGAGAAACCACCTTCGTGATACTGTAAgccttcttttt tctcttttttagaagAAAAGGTGATCGAATTCTTATTGAATTTACGATAT TTTCGAATCTTCATCGGATTATGGAATATTGTTATCATTTTTCTAATGTT TGTGTAAGTATATATTTCCTATTTCCTATATtccataatttcaattttcc taTTCCCTATATtccataatttcaattttcctaTTTCCTATATtccataa tttcaattttcctaTTCCCTATATtccataatttcaattttcctaTTCCC TATATtccataatttcaattttcctaTTTCCTATATTCCATAATTTCAAT TTATCCTATTCCCTATATtccataatttcaattttcctaTTCCCTATATt ccataatttcaattttcctaTTCCCTATATTCCATAATTTCAAGCTCTCT GTACTGTAAGGTCTAGTTTAGAcagccgactttctgccctgtctattcta attgttagagtaggcagagaGTGGACACAAAGTCGGCAGTTAAAATATTG CTTGGAAAatattgaaagaagtcattaaATGGACGTTAAGAGATGGCAGT GCATTTTCACTTTAGACAGTCCACTTTATGacaactttaattcacaatta gaataggcaggacgaaaagtgggccgtctaaactagtaCTAACAACCCTT TCTTAGCTCAGTTAGCTCATTCATTATAAATTTTCTGATCGTTGTCAAAT GAGTGAATAAACCTAGATTGTTTCATCTGTTTGAGCGATAATGGGGAACT GATAGAATGAGCCTTGCCTATCATGTTAAGTGAAAAAAGAGCTTATGAGA GACGTTAGCTGAACATACTTTTTACAAATTTGTATATAcaataacacccc tgtatcgTTGACCCAGTGAAGTAAAACTGATGGAGAAATGAAATGCCAAA ATGTTTATGAAATAACTCTTTCTTTTTGTGGATCGGCATTTAGAATTAGT AGAAGCCTTAATTAAAAAAGACGACCCTCAGAATAGAATATTCTTTATTT ACAGATAAAtgaattaaaataattttgtcttttttcaggTTCTTCTCTGG CTAATGACTGGATCAAAGCAAATATTGGTTAGATGAGACCTTCTGGAATA AGTCCAAAAAgggaaacaaacaaacaaatcaaGATTATGTACATAGTAAC TATCTCTTTATATTTGGTATTCTCACTTATTTATTTTACATCAATCAGAG AAACATTTtagtaaatcttttttaaacagTCAAATTTTAGTTCTTCCGTC TCAATTAAGTATACAAACAAAAAggcttttccgtctcaaaattctgcata attcaccaatATTTCAAGAAGCTAATTTGCTAAATCCATGTTCTGTCTCA GACGAAAAACCTTGAGTTGGTCGGAGGCGAACCGAATAGGAataggctcc tctttcgatactGTAGCTATCTACTGAAGGTAGGGGATGGTGCCACTTTT CCTCCAATATTCAAAATCAAAGATGTTTTTCAGATCATTATCTTCTGTCC CGACTCCCTACGAAAGGGAATAAGTTTCTAGTggactgttgtcatttatg cgGCATCTTTAAACTAGGATTTTTTTGTATTCTCACAGCCCCAGGTGGGA TgaagatttttatgaaaattccaTTGGGGATAGAAGTTCTATTGTTTCAA CCTCAAAATATCCAATGGGGACGtttttggagtgcatttttCCCatggaa tttcaaatggggatgaaatcaaagtcaatttcccataAGGGCTAAAACTG TGAGTGTATTTTTCCAACTGGAGATgag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061390TCONS_00061390Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:291137..299814 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.2 34.34 55.94 58.84 8.85 8.53 12.29 13.02 10.84 8.88 8.38 8.64 4.59 4.28 4.5 4.4 8.35 8.68 5.57 7.13 7.45 7.3 21.67 17.13 4.56 5.31 6.67 6.89 9.1 10