XLOC_038535 (gene) - C. hemisphaerica

Overview
NameXLOC_038535
Unique NameXLOC_038535
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:242386..250375-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038535 ID=XLOC_038535|Name=XLOC_038535|organism=Clytia hemisphaerica|type=gene|length=7990bp|location=Sequence derived from alignment at scaffold_358:242386..250375- (Clytia hemisphaerica)
CAAAATCACTTCATCAAGTATGGCTTTCGTCGTTAAATTGGCTACCATTT TTCTTTGGTTGTTGCTAAGCAACGTATGGACACAGTACATAAACGAATTT GACGAAGAACTTCGATTTGAATGTCCAAAGAATCAATATATCAGTGAAAT CGGCAGTAAGTCAGTTTTATAAAAAACTTTGGTATTACTTTTTTCAAAGG AATCTAGTGTCCGTGTAAACCTAGGCTTTACGTATCACTGAAATAGTTTT TGTTTTAAAAATATTGGAGGGATTCTGGGAGCCAATTGTACAAGCCAATA ATGGAGCCAATAATGTGGTAGCGGTTTTGTATCCCGATATTCTTCAAAAT CCAATGAATTTATATGTTGGAAGGTTAAACACACACTTAGGAAAACCCAC CAAAGGTTATTTTTTCCAGGTGTGTATTGGGCCATTCCATTTTATATCCA AACAGGGGGTAATCAGAGAAGAATTTCCAGGGAGTATAAAAAAGTATTCT TTCATTTTTCCAGGGGCCAAAAGATTGGTTTTAGTCCGTCCATTCTTACT TTTAAGCTTTTAAGATATGAAAATAATTTTTTCAATGGGTTCTTTTGCAA ATTTTGATACCAGGGGGTATTCACATATTTCTAAAAATCTTTCTTTGACT TGAAAAGGTTCGTCCAGCCCCTGTATGGAAATTTTATGGAACAGTTCATT AATTCTTCATTATATTTGTATCTTTTTTATTGATAAAATAAATAAAATCA GGATTTATCTGTTTTCAGGCAAACATCAAAATGCTGAAGAAGACAGACAA TGGAAATATACTTGTCGTTCTGGTCTAGTAAATGATCAATGTGATTGGTC AGTAGATTATGTTAATAATTATGACCAAATCATGGATTGGAAATGTGCTC AAAATGGACTTGTTGCTGGTGTCCGAAGTATCCATAGCAATGAGAGGGAA GATCGAATCTGGAAATTTAAATGTTGCCAGGTTACCCAGCTGGCACACAA CGTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTGAATGTTAGAA AAACGTTGAAACAATGTTGTGTTCCAGCTGGGTAATAACTCGAACCTCTA TTCTTTCTATAACTCGAATGTCTCCTTAACTCGAACAAGTTTTCTCGTCC CTTCAGTTAACAATGCCTTATACAAATCTCCATAACTCGAAATTTCCGCA ACTCAGAACTCGAACAAATATTTGGTTCCCATATATTTACGACTGTAGTA GTAAACGTAAAAGTTTGAATTTAGGACACGTCTTTAGATTTAGCCTTTTT CACAGGATTGGTGTTTCTAGTGTACAAATTTTGCACTGCAGTAATTATCT TTAACGTCTTTTTCGTATGGTAGTTTGTACAGAATACACTTTTCTCGAGA TGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTATGA AATAATACATTTAAACCAATTTAAATTCCCAAAAGGCAAACATTAACTCT AAAACAAAAGTACTTGAAATTCAAAATGTCTCATGAGGTGTAAACAACAC AATTATCATTGTGAATATTTAATTTTATAGCAATGAAATCTGTTTGAAAA CGAGGACAACAATAAATTTATGCATCTCGAGAAAAGTGTATTGAATTTAA AATAGCCTGTAAATGATGCGCAAATCCTATGAAATAGAGGTGCAGGTTAG TAATACACGGGTTGCAAAATTATTTTAATGCAGTCAAAACATGTGATTAC TCGAAAGAGTTCACGTGATTTTATTCCCCGGTTTTATTCCCATATTACTT GCTTTACAACTTACAGCTGAAGTAAATCTCATGTAGCAAGCACATAAAAA CTTCGAGACTTTAATTTTGCAGCCTGTGTATTCCAATCTCTCTGTAACTC AAATGACCTACAAATGAATCCTGCATCATGATACACATGCGTAATTTGGC GTTCTTTATTCATATTCAAAGAGGAATCAAAATATTTAAAACTTATCATA TTCTTTTTCTCTATCTTTAGTCCGGGGGGAGGGGGTACTTAGGCAAGTGA AGGGTACGGGTATGTGCCGCCCTTAAGGGTGCCTTTTTTGGGAAAATTAA ATTTCCGTACCACTAAGAGTCGGAAAAATAGGAAAATTTTCCTATTTTTT CTCTTTTTTAGTCCCGCTACGAGTCCGAAGGTCGAAAGTCGGGCGGCACA TACCCGTCAGCTCACCACCCTAGTACCTCCCCCGGATCTTTAGTAGATGC AGGATTCTTAAGATTTACTCCCTCCTAGCAAACTAATTCTAGTATCTGTC AGTTAATATATTGGCAGTGGAGTAAAAAGTTAGCTCTTTTCATAGTTCTG AACCCCTCTCCCCTTAAATCAATATGTTATAGACCGACCCATGCCCCCTG AACCAGCTCAGAACTCCCCAACATTGATATTTGGGGGAAGGGGGTCATTA GAAAGAGTTTTCTGCCACTATTTTCCTGACTGATTCTAGTTCGAGAGTCA ACTGTTTATTTATTTTTTTATTTACAGACGCCAGATTCAAATGAAGGTTG TCAAAATATAACGATGAATGAATTTGATGAATTTATGGATTTCATTGTAC CACGTGGTCATGCCATTATTGGTTTCCACAGTATCCATAGCAACAAAAGA GAGTAAGAAACTCTTTGATTTTATAATTTTCCATTTGGGTAAAGTCTCAC GGATCTCATGTTTGGCCTTACCGCAGTAGGTAAAGTGTCCAAGGGAGGCT CACTAGGTGAAATAAGAGATTTCCAATCTTGGAGATATTTTGAAAATATG ATGTTTCAATGAATTTCAGATTTGGGAATATTATGAAATATGATGTTTCC TCAACTATGGAAATATAGAAAAGTCATACCTCCATATTTACAAATGTATA TGGAAATATCATATTTTCAAGATATTTCCAGGATTGGAAATCTCTTGTTT CGCCCAAGGGGGGCTGTAAGAATAGTTACTAAAGGTTTACATTGATGGCG CATCAAATCAATGTTCAAATCTTGGGGATGAATGCTTTACTGCAGATTAT TTTTGAGAATTTTTCGGGTTAAATTACCTTGATGTTAAGAAACTAAAGTA AAAGTAGCCACTGGAATGGCCAAGTGGAATCTTAAGCCAGAATGAGCAAT CACCCCATCCTTTTGTTTACATCTAGAGATCGAAAATGGAGAGCTAATGT TTGTAAATTTGCTAAATGCCAAGCTATAAGAATGAGAGTATTATCTACAA TCAAACCACGGCAAGAACAAATTAAAATTATCGGTATAGCAACATCTCAA GGTTGTTCCAATAAAGCTTCATTCCAAACAAAGCTGGAGAATACGGATTC GGTTATTGAGACTTCAGCTTTTACCACAGAGAAAGGGACTTCGTTTACTT TTGGTAGGACCTTATCAGTGGAGGTATCAGGTACTATTGGTTTCCTTGGT AGTGGGGTGGATGTATCTGTTGGACTGCAAACGACTTTTGAGAACACATG GCATTGGTCATCATCAAAAACTAAAGAAACATCTCTCAAAACGTCCAGTT CAGCCTCGCAGTCACTTGGATATAAAGGTTTGTTTACTTTCAACACCCCA GCCTCACTGGAAAATTTGGCAAAAATTTCGTCCCCGCTGGGAAAATACCC TGAAATTTCAGCCCCACTTGGAAAGTAGAATCTCTATCCCCACTGGGATA TCACTAGGAATTTTTATCCCCACTGAGGAAAAGAAGTTCCACCAGGGCTG TGAGACAGGGGTGTCTTTCAATGCAGTGTAATTGCCACCGCAGCGAGCCT GAGGGCGACCGAGGATGGCAGTCATTGCTTCACGATAGGATATTGGACAC GCATCTCGAATTTTTGCGCGCGCATTTTTTTGTTTTTTTTGTTTGCGTTT GTTAGTATCGTATGTTCCCGCTGAAATGATATCCCGTAAATTTGGCTTCC CGGTAAAGTTTCATAGCTTTTCCCTTTTAGCATGCGCAGAGGACGCTTTT CATTGCTTTAACTATTAACGGCGATTGATGAATAACAATTGATGGCGAAG AAGATGATTATATTTATTTTTCTTATAAGCATCTACTTTATAAGAATGAA ATCAATAACTCTTTATTGAACGTAATACATCTTTCGGTAATTAGTTCTTA CAAAGTAAACAATGGGTGGCGAAGAAGATGATCATATTTATTTTTCTTAT AAGCATCTACTTTATTATAAGAATCAAATCAATAAATCTTTATTGAAGGT GATATATCTTTCGGTAATTAGTTCTTACAAAGTAAACAATGGATGGCGAA GAAGATGAGCATATTTATTTTTCTAATAAGCGTCTTCTTTATAAGAATGA AATCAAAAACTCTTTATTGAAGGTAATATATCTTTCGGTAATTAGTTCTT ACAAAGTAAACAATGGATGGCAAAGAAAGTGAGCATATTTATCTTTCTTA TAAGCATCTACTTTATAAGAATCAAATCAATAACTCTTTATTGAAGGTAA TATACCTTTCGACAATTAGTTCTTACAAAGTAAACAATGGATGGCGAAGA AGATAAACATATTTATTTTTCTTAAAAGCATCTTGTTTATAAGAATCAAA TCAATAACTCTTTATTGAGGTTATATACCTTTCGGCAATTAGTTCTTACA AAGTTAACAATGGATGGCGAAGAAAATGAGCATATCTATTTTTCTTATAA GTGTCTACTTTATAAGACTCTGTTAAAATAAGGAAATTTTTAGTTGCGAT TTTGCAAATCTTGTACTTAAATACGTGACCTTTATGAGAGCGGTGGTAGT TAGTGCAAACTATGACCTAGTGTAGATTTTATTTTAAACTGCAATATACC AACGATGTAAAAATAATAGATAACCAACTTGCCTTGATTCTCAAAAAACA TCCGTGTTATGGTTGTAAAAATATTAATGACATTTTGCATCGTAAAAAGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NAAATTTGGGTTAGAAAAAGTGTATTTTCCTATAGGCAGCCTCACAGAAG GACAGAAGGAATTTTCTAATTAATCAATATATAGTTGTTATATAAACATT CATCTGTTTATTTTGTATCAGGCAACCTTCATGCACTTTTCATTCGTGAG ATATCGCAGTTCAAATCACACATATATTTTTCAGATAACAGNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTATTTATCCAGAT GAAGATTAAGTGGTATCAGGCTGATCCGTAGTCAATTTGTCTAAAGATTG GTACCTTTATCTTTTGAAAAAAATTCCGAAATTTGCTGTAAATAACAATT CAAATTTTCTATCAATTCAGTGGATGTCAAAAAGTGTGTCAAAATCTAGC AAAAAGCATAACACGCACTGCACACAGAGCTTTTTAATAGAGTGCTCATT TCAATAGGAAAACAATGGTTGTTCTCTTGGGAGAAGTGCCTTCTAGAGGT AGTTGGTTATCTATTATTTTTACATCGTTGCTTGAAGATTGCGCCAACAT GAAACACCATGTGCGTTTGTAAGTTTGTTCTTTATGTCTCGAATTTTCTT GAATGCTTTGTGATTCTATTAATTTCACTGTATTATTTACTTTCAGGCTC ATCTTGAAGCTTATGTGCCATTTTTTGAAAAAAGAAAACTTAAATATTAG TTTCCCACAGCACTGAAGACGAATGAGAGTTTTTATTAAAAATTTGGAGA TTTGATGTTTCACAGAAAAGTGCTAGCAAGGGGCATTTCGGATCCCATAT CTTCCGAAGGACTTTTCCGTTTGCCTTGAAATTTGACAAGCTTCTTAACC TAAGGTTCACCGAGCATAACTAGAAAAAAAAGCTCAATTTTTGAAATCGC AAATTTAACCGCTAAAAATCGCGAATTTTTCAGCCAAAAATACATTCAAA CATAGCACGTTAGATTTTCTAAAATAAGCAAAAAGAATCTTCGCATAAAT TTTATTTGACTATCAAAAGTTACAGGCATTCTTGTTTCCACTGCCAATTA TATCTGGATAGACTTTAAAATCACTTCTTTACTTTCAGGACCTGGAGCAG CGTTGATCATAGGATATGTCACATATTACAGATATGAAAATACAGATGTG GACGTTGAGTACGACATAACATGTGACAACGGTCAACATCGAAAACAACG CTCAAAAGCGTCCTTAAAACTTGATCGATACAGCCAAACACATTTTGTTC AAAAACATGGCGCATTTTATTCCAAGCAAAATTGTGACTATGGAAGTAAT GATTGTATAAGAAGCTTAAACGGGAAAAAAACACTGGCGCCAAATAAACT TATTTCCGATTTCGAACGCTGTATCGAGAAAGCAAATATGAAGCCGACAA AACCAACGACTGCGACAACGACTACGTCAAGACCGACAAAAATACGACAT GATGTTCTTTCTGACGTCACAAGAGATACGGTTAAACTAAAACCACGTTG GAAAGATAACAATAAAGACAACATTTTCACTGGATCTGCAGTCACCGTCA ATCATGTAATCTTAAACAATATTAAATTTATAGTTTCAATTTTACTCTCC ATTAGTATAATTTTTATGTAGCAAGTTATATTCGAAGAGCAGGCAATATA CGTTCTTTTCTAACTATGTGTATACGGTGCTAGTGATTGTAGATACCGTT AATACGCTGGCTAGGCCTTCAAAAATATCTACCCTTGCTATGAGCTTTTT TGAGTGCATCCATTTCGATGCATAGGCAAAGGAGGGCTATTATTCATCGA TATTATATGTGTTAAATAATAATTTTATAAGAAAGGGCATTTTAGAATTT ATTTCAAAATGCATTTCGAAGTATAATTGAATTACGCGAGCGATATCGAG CAAAAAGCAAAACACGATACTTCTTACGCTAACATTTCACGCAAAATTTT ATGATAGAATATAGTTGAAACATTGGCATTACTATATATTTACTATTTTT TCCATTCCCCAGCCATGAAAGATGGCATAGAATATCAATTCCCATCGGGT TTCAGTCCATTAATTTCATCCCCACTGGTAGAAAAAAATCCTACCGGGTC TGTGAAAAGGGGGTGTATAATTACTAGGAGAAAGTCAATGCAAGAAATTC ATACATTTGCCAAGCGTACTTTGTAAACTCTGACCCAATCTCCTTAGGGT TTAATGATAGTAGATGTATTATCAGGTTTCTCTTAAGCCCGGGGGGGGGG CACTCATATTTTCCGACCAACGGCATGTGCCATCTTTAAGAGTAGGTATT TCAAGACTCTCGAAATGCACTGTAAGGGTGTACTTTTGATAGAGTGCACT ACAAAGGGTCTTCTTTTTAGGTGAATACACTGTAATGGTGTGTTTGGGGA CTGCTGAATTGCAAGTCTGACAGCAAGAATCTTTATAGTTTGGCTCGCAC CCATTTTGATTTGTTTTGCACTTTGTCTCGACATCCCGGGCTCATTTTTA GATGGCGTCACCAAAATAAGATATGAAATCAAACTACACTGTAAGGGTCA GAAACGTTTGGTAGATGCACTGTTAAGGGTATCCTTTCACTGCTCAAGAG ATTCACTGTAAGGGTCCGATTCTGAAAGCCATTTCTTTGGCGGCACTTGC CGTAGTTTAAAAATCGAGTGCTTCGTTCTTAAAATCAATCAGAGAAAAAA AAAATCTAAATTTGTGTCAGAATCCGAGAATCAAATATCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061426TCONS_00061426Clytia hemisphaericatranscript
TCONS_00061425TCONS_00061425Clytia hemisphaericatranscript
TCONS_00061424TCONS_00061424Clytia hemisphaericatranscript
TCONS_00061423TCONS_00061423Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061425-proteinTCONS_00061425-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:242386..250375 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.97 1.04 0.26 1 1.75 1.32 6.64 6.34 4.1 4.99 4.62 2.81 6.8 4.28 1.68 4.87 1.46 1.08 1.12 2.13 0.7 0.53 0.46 0.41 1.35 1.59 0.68 0.6 0.59 0.48