XLOC_038558 (gene) - C. hemisphaerica

Overview
NameXLOC_038558
Unique NameXLOC_038558
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:856363..862267-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038558 ID=XLOC_038558|Name=XLOC_038558|organism=Clytia hemisphaerica|type=gene|length=5905bp|location=Sequence derived from alignment at scaffold_358:856363..862267- (Clytia hemisphaerica)
TACCATGGTGATGACCAGATCTGTCTGGTGATCGATGAACCGTTTAAAGA TGTTGGTGATTCTCATTTGATTGATGCTCGTGGATGGAGATATTTCAAGA AAGAAATCGTCAGAAAGGTAAATACGGGGGAAATCCTACTTGTTCGACAG TATACTTGTTCGAAGGTACATTTGTTCGACAAATTTATGAATTTGTCGAA CAAGTGAGTTGTCGAACAACTGGGTTGTCGAACATGTGACATATGTCAAA CTCGAACCCAGTTCCTTGTCGGTTTTTTAAGATTCTAATAGCACTCGCGA CGAAAAGAAAGACTACTTAGTTAGTGAGGGATGTACTCAGACATATTGCC CGAGGTCAAGTAACGATCGCGACAAAAAAAAACCGGTTTAAACAGTTTTA TTAGAACTTCTTAATTTGGGTTTAGCCTGGCCCTCAAATAGAACAAATCT TCTCAGATTTAAATTTAAAGGAGGTAAAGGAATTACTGTGATTACGAAAT TTTGAGCAAATTTGGTTAATCTTTTCCATTCTCAAAATTTGGTCATGCTT TTACGATGCTCCTCATTTTTTCCCAAATTTCAAATTTTCAAGGTTCCATT ATCTTAAAGCTTTGTGAAATTCTTTGATTTACTATTCATTTCAATGGCTT CCAAGGGACAGTGCTATCAAATAAATAATCGAAATGCTTAAAAGTTAGAG CCTATTAGCTGAGGGACTCCTGGTTAATATCAGTCATTTCCTTAAATCCT CTAAGTTGTATTAGTCCCTAAAGTACAGTGTGTTCCGCAAAAAAGTATAC TCAAAAAGTAAAATCGAATTATGAAAAAACTTTAAGCTTAGGCGAAACAA AAAAAAATTCTTGTTTCCGGAAACCAGCCGGGTGAAAAAAAATTTTTTTC TGACCCGGCCGCAAACTTCGTTCGTTAGTAGTCCGTACTTGTTGTAATTT AGGGCATAATTTATGCTGTGTTTATACATAAAAGTTATTCTTAAACTCTA TTTCAATGAGCCATAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTA TTTTTAAATGAGCTCAAGGCACATATATTCAGCGTTCTACGGTGAAAATT TCATTGTGAAAAAAGTCTTAGTTTTAGAGATATGAAGCTTCAAGCACACT AAGTCGGAGATTAAATAAGTCGAGATGGAAAATTTTCAAAGCAAAAAAGC TAATTTACTTTTGATTGACAGCTCTCTTTTACGTCATTTTGATGAAATAT GCCATTTTAATGGTCAAACCTATGCACCTTCCAAGTCAAATTTCTCGTCA ATGAAAAGCTGGTTGAATATAAATCTTTCAGCAATGGAAAGAAGAATAAT TTTTCTTTCTGCTGTATACAAAATTAACTTTCTTGGACATTTCTACCTTT TCCAAATTAAGGTTAGTTATGAGTTAGCTTCTTTTTTTTAAATATCTTAC TTCATCTTCAATGTTGAATAGTTGCACCCTTGTGTACTTAAGACTCGATA TATCTTGAACTAAAAAACTTTCTGAATTAGATTTTTAAGCACATGGAGCT GAGTAGCTATACTGAAAATTAAAGTTATTGGTTTAGTCATTTTTTTCACA GAATTATCTTACTTTTTCAGTATACTTTTTTGCGGAACACACTGTATTTG TTTTTTACTCATTCACAGAAACAATCAAACCAAGTGCAAACAAACTTTTC GATTTCCGAAGGTAAGTTTTGCCTGAAATTTTGAATTTCCGCCGAATTTG ATTTATTCTATAGATTTTCAAGTTTGTTCTAATTCAGTTTTTTTTGCCTA TTTAATAAACGATTTTTGGCCAAAAATATCTTGCGAACGCCAAAATAAAT TCCTTCTTAAAACTTTTTCGGTCATCCGCTAAATTAAATTCCCGCCAAAT TTTCTTTCTTTAAAGTATTAAGTCTGTAAATTACAAACTTTTCCAGTTTT TATTAAAAAATTTGAAAAATCCTTTGGAAAAAGAAGAAAAGGTGTCCGAA ATAAGGCGAAACAGCGAAATGCGATTTTTTTTGGATTTTTTTTTTTTTCG ACCACGAAAATAAGATCCTTAAATTATGTTACCTTAAAGTAATTTTATAT AAATGTTTTTTTTATAAGCAAGTGTCTGCCCCTATATCAGGCTCGCATTA TGCTTAGTATTCTATTGTTTTTAAACAATAGAGCCATTGTTTAGGTACCA AAAACTGAGCCTGCATATGTTTATAAACGTTTTGCTTATAGAATAAAAAA CATGTATCTCCAAATTGAAAAATAATTTAATTTTTCATAGAATTTCAACC TAAAAGGAACAACTTGGTCAATACCATACCCCTTCAGACGAACCAATGGG CTCTCTCATTCAAATTCATTATATATGACAAGCCTCCTGCAAGCGACCAA CAAAGTGGAATTTTAACATTTGCCACAACCAATGCGGACGGACTGATTCT TCAAAAGTTATTTGAAATTCGTGATAGTAAAAATTCTATGAGGATTTTTA TTGTACAGCACAACTCAGATATTAAGGTATAACATTTGTTTTCTTTTTTT GCCACGGAAGGTTGTCTCAATCTTTAGTGAGTTAAACCATACAGTGTGTC CCATTGAGTTTCACGCCCGAAGGGCTAGACGCGAGACTCCTGGATGGGAG ATGAAACCACTTATTTCCCATCCAGAACACATGCGCGTAGTTTTTACACA AACGCCGGATTGAAACTAAAATATATCGCTGGATTTTAAAAAATGTAGTC CTTTAAAACAAAGAAACCGCTTGATAAAATCCGTCGTCATGATTACGGAC CATTTTTTATATAGAGATAAATCCTCATAATTTATTCCAAATTTTACACT TAATTTGACTTGTACACTTAATATTGCAATCTCTAAAAAAATTTCAATCA TTTTTTTCAAATATTTATTGATTGAACAGAGAATTGTAATCTTGTTTCAG TTATTCTAAGCCCAATTTCGATAATGCGTTTTGAGGATTATACCTTTTAT AAAAATTTGGCTGTTTTTTTTTTTTTTGGGACACACTGGTGCTCTGATGC CATGTCCTGGCAAATAATATCAAAGCTCTTGGCATTTATTAGTGTTTTGT GACATCGAATCAGGAAAAGAATTCACTATCAAGAAATTGCGTTGATAATA AATCGTCACAACATTACTTCGAAAACGATGCACGATTTGACGCATTTATA AAAATGGCCGAATTTTTTTTTCAGCTGAAAATGCTGGAAATATGCCGGAA ATCGCCGTTTTTCTGAATTTTCATTGGACTCTTTCTTTACAATTGGTTGT TTTTTCATTCAAAAACATTATTAATAGCAATGACCCCCATCAAGCATGTT TAGATTTTCAATAAAATTGATTTTGGAAGCCGGAACTATTTAAAAATCAC CGGAACAACTTATTTTCGCCGGAAAGATAGTATTTCTTGAATTTCTCGAG CTGTACTTTATATTTTGTTATGAAATTTTGCACACTGAGGCAAAATGACA ATACCTAAAATGTAAAATGTATTTTTTTCCGGCCGAAAATACCGGAAATA TGCCGGAAAAACCGTTTTTTTGAGATTTTCTCGAATTTTAATCCCTAGTT TTTTCTGATTTTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACATGAC CGAGTTCGATTTAAAAGAAATTTTTTTTCCAGCCAAAAATGCCGCATTGG ATTTTTTCGTTTTATGCCTTTGTTTTTTTTTTCAAACAAAAACATAATTT ATAATGTCCACGATTAAGCATGGTTCAATTTTCAATGAAACTGATTTTGG TACAGGAACTTTCTAAAAATCGCCAGACCAGCCGAGAATCGCCGGATTTC TTGAATTTCTCGAGTTGTTCTTGTATTATTCTGCATTTTTATACTATTGT TGTCATTTTTCAATTGTCTTATCTTCAGGTAGGTCCATTCAGCATGTAGC TTGTTATTTTTATTCCCATAACGAGGTCCTAATAGGGATGAAATTTTTTT TACCGATTTCAAAAAAAACGCAATGGAGATGGTTATCGAGTGTAATTTTT ACAATTGAATTTCAAATGGGGATGAAATATAAACCAATAGTAGAAATTGC AGGGTATTTTTTCCCTGAGGGTACTTCATTTCCAAAGGACGGTATTTGCC GCCAGTGCATTTACCGAACACTTCTGACCCTTACAATGCAGTTTGTTTTC AAATCTTATTTTTCTGAAGCCACCTGAAAATGAGCCTGAGATATCGACAC AATGTGCAAAACAAATCAAAATAGGTGTGAGTCAAAACTACAAACATACA TCAGATTGCAGTCTTTAAACACGCCTTACAGTGTATCCAGCTAAAAGACC CTTGAAGTACACCCTCAAAGTGCATTTCGGGGGTCTCGAAAATCCTACCC TTAAAAGCGGCACATGCTGTGGGCTGGACCATATGAGTGCCCCCCCCTCC CACAGATTTCTTCCACTGGGGATGCGAAATTTTCGCCAGATTTTCGACTT TGGCGGGGATCACATGTTTCTATATTTCCTATGAAATATTTTATTTCCAT ATTATTTCGTTTTCATTAAAGGCTTTATTTCCAATCGATTACGAGTTTAA CAAATGGTATCACCTTTCATTGGAACAAATCTACATTGCCAATGACAATC ACTACGTTTTGTCAGTCATGTTTAATCATCGTCAAATACTCCCAAAAAAT GGAATTTTCATTAAAAACCCTAAAAAATTTAACAATGTGAAATGTTTTGC TGGGCCACAAGATTTGCTAGCATTGAATGGACGAGTGAGTGGTTTGGAAT ACAAACAGACTGCTTCAGATAAAAGTAAGATAGTTTATAGCGTTTAGACA TTATGAAAAACTCACTATGGTCAAAGCCCTTAAACATTAACGTGTAACGG CGCTCCATCATCAAAAGTGAAACCTAAAGTGGTGTTTTCGATACCCTTGT CGCAAAAAATTTTCCTTCTATTTTCGTCATCAGTCCCTGCCCGCGCTGCT TAGGGTTGATAGGTTTATTTTATAAGAATTTTTTCCAAATTCTGAGGAAA ATTAAATTATAGACTTCAAAATTCTTCAAGTCTTCGGATGTTCTTAACTT GTTGAGTTTTAAGCCTAAATATTTTACTAAAATGTTCTTATTTTAGTGAG TACTTTTTCTATTTTCTCATAGGCTTCAAAACAAAATATTCGTTTCTGGT TGACATCATTCCAACATGGCCTGGAACAAATTGGGAGATAAGCTTCAAAA TCAGAGTGCATTCAATGAAAAGGGGTTCTTTTGAACATCCAATAAATGAT TACCAAAATGTTTTTCAACTTGGGATCGGTGAAAATCATGGAAAGGATGG TACACGGATCGCATCTCTTTTCATTCAAAAGCCATCCCGGAGATTTGTCT TCTATGTAGATCGGTTAGTGAAAGCATGGTATGGGATTTCATCCGCGTCA TCTTCTTACATCCAAGCTTTCGAATTTGACCAAGAATACAATATCAAAGT CAATAAGTTTGGTGTTCACGTGCAAATTTTTATTGACAGTGATCGCCCGA AAGCTAACTTTCAATTTTATGCTAACAGAGATTCCAACAATGTTCAATTA CATTTCAGTAACCCTTGGTATGATAACGCAGATGCGACAATAACAAACTT GAAATATAATTATTGAATTGAACACAACAGATTGGTATTACTCATTGATT TTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061472TCONS_00061472Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061472-proteinTCONS_00061472-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:856363..862267 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.11 0 0 0.69 0.39 0.05 0.13 0.06 0 0 0 0.1 0 0.02 0.02 0.96 0.45 0.23 0.08 1.45 1.08 0.5 0.8 1.25 2.34 0 0 0.08 0