XLOC_038635 (gene) - C. hemisphaerica

Overview
NameXLOC_038635
Unique NameXLOC_038635
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:669228..673549+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038635 ID=XLOC_038635|Name=XLOC_038635|organism=Clytia hemisphaerica|type=gene|length=4322bp|location=Sequence derived from alignment at scaffold_36:669228..673549+ (Clytia hemisphaerica)
CTCAAAGTtgtgaatttgatgttttcacGTTGCAGTTGTAGTTGCTGTTG
TGACTGCGGAAACTCTCTACTATCTCCACAGTGCTCCACCGCAGagacgg
taggtaaaaatgcacACTTTAATATTGTGGAAGATTAGAGGAATttaaac
attgtcaattttatTCTTTCTGTTAAAGAgaaatgatttagatatttgaa
catgatatcaatgataaatttttatggattttctcctgaaaatttcacaa
aaattcatcttaAAAGAAGTTCTTTAACTACCATTTCTCTACtgggtttc
cttatgagaaccagatttTTACCTACGGTTTTGTGAAGTTTCCCGCTtcc
gctaaaatcaaaacaatggaaaattgtttggacgcgTGCGCACTGAATGA
TGTAATAATTAAACTAATCAAACggtatttttaatcaaactttgtcaACC
TTAATCGAGCTTTGTTGTTTGATTAAAGAAATCAAGCTTaatcaaacttt
taaaaaaaagaaaccttaataatttgattagtttgattacatTAATCGAA
CATAGNcttaatcaaactttttaaaaaaagaaaccttaataatttgatta
gtttgattacatTAATCGAACATAGTGGAACTTTGTTGAATTCAATTGAA
CAGTTATTTGAGAAAAACCCTTCTCTAGGCCTCTGCGAGCGTGATCTATA
GATTGGCGATCTAAGTTTTGATTGACCCTTGAAAAGAGAATTGTAATCAT
AATCGGCGCCGAAGTCTCTCCACCTGAAAGTGGAAAATAAAGGCCACTAT
TTTCAGAACGCTCTTGGAGGTCTTATCTAATAAAGTATAAGCTCGAAGGG
CTAAAAaggaatctttaacctttctcaggcaagaaaaactGAAGCCTTAG
AGCATATTTGTCATcacaagcgatttgaagtataAATAAAACCTATTGTT
TGATTTGCGATAGGGCGAAAAGAAATAagcgatgaaaaatgaaaaccttT
TCATTCTACATCgttaattattttttacttcgtcgtaaaaaagaacaata
tatttttaattCCAGACATATGTCTAGATTTATTTTTTGCGACAGGTTTT
TgcgacaaactttttttttcagtggacacCCAGCTTTAATGTTGAATTGG
TTATGTGCATATTTTGCTTGTCTGAAAAAAAACCTCACTCGACTGGccgc
aaaaaactttttaaaagacTAAAATGATACCGCGAAAAATATCCTATTGA
AAAGTACATATTTTTCATAAGCAACCAGGTTTTCAAGGTTTGAACCTTCA
AATTAGCTGACTTCTTTGGCagcacaaaaattttttttttttgtggtAGG
GTAACTCTCAAAAAAAACCTTCACCAGCCTATTTCTGGAAGCAAGGCATT
CTTTTATTTGGCCTGATTGTCTGACTTCTGATTATTAAGAAGACTTTCTA
CTTCTTAATCTTGTAAGGATTTGCTTTTGACTATCTTATTTACCGGCGAA
GGTACAGATAAAACCTTACTTCGACTGACAGTAAATAATTCCTTTTTGAA
ATTGCACAAGAAAATGACAACATGTTGCAAATGAAAACATTGATCTCAAA
CCCCTGATTCATTGATgaaaacatttgtttttttaCTAATGTGTTGCAAa
tgaattataaaaaaatagaaaatacttatatttttagatagtataaataa
aaataatttatgtgATGTTGTCCCTAATATCAATTAGAAACTTGCAAAAA
AGTAATACTTGGAGCCGAGCTTTTTCTCAGTTGATGCCAGTGTCTACAGC
TGTTTTGCAACACCAAAATGCAGAAGGAAAGACAATTATGCAAAACATAT
CTGAAATATGGAGTGGTTTCTTACTTGCTGTACCAAAGAAAAGACGGTCA
ATTGCTAAAAGAAGATGGCTGAGAAAATTTAAAGCCTTAAAGCCAAGAGA
TGATATTGAGGACTGTGTTGTTTGCGGTGGTAAAAAACTACGTGGAAAAC
TTTGCCATCATTGTTATCAATGGACAATGTCCTTAACAGAAAAAGTCtgg
caaaaacaaaaagatgaagGTACACTTAGGAAGGATCGATTtgtcaaata
ataaaaaaatcgatTTGAATATTGATTAAATTTTAGAACATGTTTTTATA
TTGTGACTGTGTATTTCTATGTATAATTTTGTGAGAAACATATATATAAA
GTGTCCAAATCAATTTATCTTTTATCAATTCCTTGATGGGTTCTGTGAAA
CTTTGAGAAGTCCTTTCTATGTGTTTTACTTTGTCTTATTATATATTATG
ATTCCTTTTAAATCTCCGAATTCATGTTTTCTGGGCATAGTTTTTAGTGA
TGCTGCCACCTCATTCTCATGTGATATCAGGTGTTCTGTTAAAGAGAATC
CAAATCATATTGGTAAAAAGTCTTCTTACAAttgcaacattttttgaatg
caaaattattactttttattctttaacTTTACAATATGGAAGACATGAAC
GAGAAAACTCAACATGGTTTAAGGAATTACCTCCAAAAATTTAAGGTGAG
ACAATTTTTATTGCAAACCAAAGAAAGTGAGAAGATTATTgtccaaatag
aaaaaaactttaattagTTCCCATGTTGGTAAAGATCAGCTCCCACAAAA
AGTTACTTTATTTACTATGAGGTAATGAAAACAGGATTCCTCTGGGAAAA
ATTGCCATTTTAATGAAATGCCAAGAATCATATAGCTTAGTGTTATACAC
TCTTTGTCTTGAGACCATTTtaacttctttttcaaaagaatgttGACATG
GTCCAAATACAACAATGGTTTTGTATTTCCCTTttaggaaattgactttg
aagaAGTTAAATCTATTGAATTGATTGTTGGCAATGAATCAGCAGATCTT
GATAGCATTGTTTGTCCTCTTGTTTTGGCGTATTACCGATCATGCAAAAT
TAATATTCAGGTTTCAAGCATtatatattttcttcattttgttaTCTCAT
GATGAGACGACCTTTTCGATACAAGTTCTTGATACCTGAATGTATGTTTC
CAGGATCCTTGTCACAAAAGCCTTGtcctttgaaaaaaagtatgggtata
taaatcaaaagaaatgatATTCATCCAAGTTAGTAAAGTTTCTTGtgatg
tttttctcaaagaTTGATGAATCAAATTCAATATGTTTACCTGTTGTTTG
GTGCCACAAAGATGACGTCGAATTAACCACTGAAGCAGTTGCATTATTCA
AGGACACCTGCTTGCCTATAAAAGATCTGTTATTCCAAAATGATTGGGAA
GCTTTAAAGGAAAAGTTTTCACACAAGGATTTGAAGGTGACTTTAGTTGA
TCATAATCACGCAAGGGAGCACCCTGACTTAAATgaatttgttgttgaaa
ttattGGTAAGCTAATATTTTGaattaaatgtttttaatgTGTGTTTAGA
AAGTACTAAGTGAAAACCTTCTTTCCAATTCTGGACATTATATGATTCAA
ATGATTCATTCACTACCTCCTAGATTTTATAAGCACTTCTATTTGCTAAT
TTCAGATCATCGCATTGATACAAATGACTTCATAAACATATCCAAGAAGA
TTCAACTCTTGGGTTCCTGTTCCTCaataatcgcacaatggcttcaTCAA
ACAGATAGTGAATTTCTCGTCAATTCACNGTTCAACGACACCTGCTTGCC
TATAAAAGATCTGTTATTCAAAAATGATTGGGAAGCTTTAAAGGAAAAGT
TTTCACACAAGGATTTGAAGGTGACTTTAGTTGATCATAATCACGCAAGG
GAGCACCCTGACTTAAATgaatttgttgttgaaattattGGTAAGCTAAT
ATTTTGaattaaatgtttttaatgTGTGTTTAGAAAGTACTAAGTGAAAA
CCTTCTTTCCAATTCTGGACATTATATGATTCAAATGATTCATTCACTAC
CTCCTAGATTTTATAAGCACTCCTATTTGCTAATTTCAGATCATCGCATT
GATACAAATGACTTCATAAACATATCCAAGAAGATTCAACTCTTGGGTTC
CTGTTCCTCaataatcgcacaatggcttcaTCAAACAGATAGTGAATTTC
TCGTCAATTCACCTGATGTCTGCAAAATGCTTTTGGCAACTATCTTGGTT
GACACTTATAACTTGGATTTACACAGCGGTAGAACAACTGAACAAGATAT
TTTCATTGCTGAGCTTTTGTCAAGCTATATAGAAGATGTTGATACCGATG
AACTGTTCACAAAACGTCAAAAAGGTTTGTCAGTTGATTTGACTCATTAG
GACTGCACTATTTTACTTTTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061572TCONS_00061572Clytia hemisphaericatranscript
TCONS_00061573TCONS_00061573Clytia hemisphaericatranscript
TCONS_00061574TCONS_00061574Clytia hemisphaericatranscript
TCONS_00061575TCONS_00061575Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061575-proteinTCONS_00061575-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:669228..673549 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.84	42.82	29.72	31.1	16.02	13.27	17.93	17.59	16.43	16.5	11.03	11.87	9.55	8.27	18.24	20.6	32.62	33.51	7.81	13.19	23.33	19.49	52.19	48.47	9.03	11.06	17.73	11.53	24.81	25.23