XLOC_038650 (gene) - C. hemisphaerica

Overview
NameXLOC_038650
Unique NameXLOC_038650
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:1124355..1128616+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038650 ID=XLOC_038650|Name=XLOC_038650|organism=Clytia hemisphaerica|type=gene|length=4262bp|location=Sequence derived from alignment at scaffold_36:1124355..1128616+ (Clytia hemisphaerica)
TTTTAGGAAGAACAAATAAAATTCACTTTGATATACAGACTTTCTCAATT
TGATGATGTAACACTGATCACTTTCGGCGAAGATATCGGCATTcattaaa
gcaaaaaaatttcgtTAATAATAACAGGTAAAGCTATTTTTATTACAGGC
TCCACAACCCAAACACGGGGTGCGAGTTTATAAAGAGCACCAGAGAGCAC
TGGTCTCTTTAAACCCTGGAGTTAGGTATATACACCATCTTTGATCtaga
tttctttttgaaattggtacccgcaaagaagccatcacaaatgaaatgca
ctgtaagggtgtacttttgatagagtgcactacaagggtTTTCTTTTAGC
Nagagacttttgaggaacgagaaaaggtacccttatggctcgcacatacc
cggcacccattttgcctaagtccccccccccgggctttgggggggactta
aaactcaggggggacctaatttttgcctgggacctaaacctgCGACTGTT
AAATTGCTGACAGTAAAAATCAAAtgtgtttttaaagttttgaaccGTAC
acgttttgatttgttttgcacattgtgtcgacatctcaggctcattttcg
TGTGGCCCCAGCTAAATAAGAcatgaaatcaaactacactgtaagggtca
aatGCATTATAAGGGTGCCTTTTCGCTGATCAAGGACTGCACTGTAaaaa
gggtccgattttgaaagccaactCTTTTAGGGacacatgccgtcgtttag
aaatcgaatGCCCCCCTCCCCGGGCCTCAATGGTAAAAATATCAGAGTAC
TGGTGAAATAAGGCCCAgcgtaaaaaaaagaaaacgtaaCTGCGTACTGA
ATTTAGTGTAGTTTGATACTACCAATATTTGAGGGGGCCTACGGAAAAAT
ACCCTACTTAAATGCTAACCCTCTCTTTAGGAAACCAAAAGGAAAAAACT
ATTGAATGCAAAAGCATGACCAGACTACATCCTCAATTTTTGACAGAATG
GTTCTGTAccaatacttttttttttctcgcaGATTCGCAGGGTATAAAAA
CGAAAacctttcaaaacaaatatttaactgatatggcaaatctcaaaaaa
ttaaaatctaaaaaaaaacttcaaatatTGTTGACTGGCAATCAGATTTG
TTACCTATGGTAACAACAGACCAGCTTCAGAACCACAATAACACAAAACA
AATAATAGCAATTGTCACGCACATTGCGTTAGACATAAGATTTTCACTGA
AGGAATGATTGATTAAACTGAGATATTGAAAAATagcatttcaaataaaa
aaggaaGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccc
cccctgctggtTGGGGGCGGTACACCCTaagttttttcccaaaaaaggag
ggggctggaagtacaccacttttATGGGGGGACCGATGTACTTGGGgcag
ctaaaatctcatcactgaacgtgggggctaaaataattcagcttaatagt
tggcttcaataTTACCCAAATTgaatgaatctgaaaattttcccTTGCGg
cgcaatatttttatagaaagtgtgcaaaaatatttcatctgaAACCTAGa
actgaacgcaatttacattggaaaacccttttttactggATGAAAAGTGT
CTAGAGTCGaaagtcctgggggctaacaaaaaattcaaagtctttggggg
ggggggacttaaaactcaggggggacctaatttttgcctgggacctaaac
ctgGGACTGTTAAATTGCaggtctgacagtaaaaatcaaatgtgttttta
aagttttgaaccGTACacgttttgatttgttttgcatatGCTAACCCTCT
CTTTAGGAAACCAAAAGGAAAAAACTATTAAATGTAAAAGCATGACCAGT
CTACATGCTCAATTTTAACAGAATGGTTCTGTACCAATACTTGAGATTCG
CATGGTATAAAAACGAAAACCTTTCAAGACAAATATTTAACTGATATGGc
aaatctcaaaaaatcaaaatctaaaaaaaaaacttcaaatatTGTTGACT
GGCAATCAGATTTGTTACCTATGGTAACAACAGACCAGCTTCAGAACCAC
AATAACACAAAACAAATAATAGCAATTGTCACGCACATTGCGTTAGACAT
AAGATTTTCACTGAAGGAATGATTGATTAAACTGAGATATTGAAAAATag
catttcaaataaaaaaggaaGCAACTGCACTTACATTGTAGCAAGGTCTA
GCATTGGAGCTTGATACAACAATCAACATCTTTCTCATCTTTCATTTAAG
ATATCTATTCCAAAACAGAAGAAAATGACAGCAGACAGCAACCACCAAGA
TGTAGCCATCCTCCACCTAGAGGGAGTCAGCAACAGCCAGTCAGGAGCCA
CACCAGCTTCTACAACCGATATCCAGCCATCCTCAAACATACAAGCCACT
GCCACCAGAACGATTGCAGTATTTAAACCACCATTCCATACCAAATTGGT
CAACCAGAAATCCCTCCGTGTTAAAGTCTATTCAATTCTTTTCTTGATTG
CACTTATCGTTATAATGACGGGCGTATTTCTGGGCGTCACCACAAAAGAA
TATTTCATTATAACTGCTATGGTTCCCATTGGAGTTCTCATCATTGTAGC
AAattgtttttgtatttatggTTATGAATTCTATCTAAATGAGATAAATG
AGAGAATGTTATGTAGACTATGGAGACCGAAAAAGGTACCCCTTTATCGA
GTGGCGGTTATCAATGGTGGGCAAGGGCGTGGTGATCAACCACCCAAATA
TGAAGATATAATGCTAGAATATGATGATGGGTATGAGATAGGTAGGAAAa
agtttttcatcttttttaaaCCAACATATTTTGGAGTATCAGACTCTCAG
GTATTTTGAAAGCAAAAAGCTTCCCCTTTGATCTGCTTACTCAATTTAGG
GAAACAGTGAGGAACTTATTCGAAATTTAGTTAATCAAGTAGTTTCTAAT
TTCCCTGGAGCTAAATTTGGGCTGAATCCCCCCACCGTTATTTGAAGTTC
ATACCTTGAAAGATCTGTTTATCTCAAAGATTTCCTATTATTACACtgtt
acacccccttctcgcagacccactgggaacctttCCCAATTGAAAAAaca
tcgtccccggtggaaaattatcctcgattttttgtccccattgaaaataa
tcaagtaaaccaatcctcactgcaaaatatgatTCTATTtctcccatccc
cactgaattttctgacttgaaaacaaaagaattgaaatcccaagCCATAA
AAATTATTGGAATATCATTTCCTCATTtaatccccactggctgaaaaaaa
atccaaccgGGTCTGTGGGAAGGGGGGGGTGTACTATTCAAGGAGTTTCC
GGAAGATCTtaattttcttgtaaaaaaaccaCCAAACTTTATTTCTCTAC
AGCATGTGCAATGTTAGAGCAGCCACCACGCTATGAAGAAGTGTATGAAA
TTTCACCCATTTAAAAGGTGAACATTTTACGTGAAGGAGAGAAGACAGTG
TTCAACATTGTACGCTATAATGCCCATCGTGCATCAAGGGGAGACAGAAA
AGTCTTTTTAGTTCATATCTATGAAACGGATTTTTTTGGTCGTACTAAAT
ATAATGCAGTAAAACGTTCCATCAAAAAACCTAACGAATTTTCAAAAGCA
AATTGAGAAAGGAACATCAAGACAACGGCCATCTAGCGTCTCTAGAACGT
AAAATGGACGTTGAATCAATGTAATACACACTGACCTTTAAAAACACTGG
ATACAGTTTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061621TCONS_00061621Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061621-proteinTCONS_00061621-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1124355..1128616 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66	0.59	0.47	0.24	0.53	0.28	4.62	5.03	2.11	1.54	2.6	1.22	3.14	1.83	3.83	2.52	4.84	2.62	0.51	0.39	3.39	2.74	1.54	1.67	1.3	1.45	0.12	0.06	0.29	0.39