XLOC_038690 (gene) - C. hemisphaerica

Overview
NameXLOC_038690
Unique NameXLOC_038690
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:1467978..1473277-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038690 ID=XLOC_038690|Name=XLOC_038690|organism=Clytia hemisphaerica|type=gene|length=5300bp|location=Sequence derived from alignment at scaffold_36:1467978..1473277- (Clytia hemisphaerica)
AACATTATAAAACACAAAGCAAAACGCAAGTCAAAAGAAACCTCAATTTA
AAATCTATCGAGAAATTGCAACACAAGTTGCAATACTGTAACCTGTATTT
AGGGAAGTAGCAAAAACATTTCAGTCGAGGAACGCTCTGTAAGAAGACAT
AAGAAAGATGAACCTTCGCCTGTTGATTTTGGTGGGACTTACATTTACTC
AAGGTAAGGTCTCCAATGAAATTTTTGTTGTTTTTTTGTATCGTTTAATC
ATAGTATACTATGGTTTTATCGATAGTTACAGGCTCAACATCGTGGCCTT
TCATTGGCATGTCACTGTGTCCTGACACTTTGTTATATATCCGTTTTTGA
CGAAGCAACGCTTGGCCAATTCAAGCTCATTTTGGAAGAAATGTCGCCTT
GTAAAAATCGCTTGTATTTCATAACGCTTCGGCTTTACAAAGGGGCTATT
TTAAAGTCTATCAATAAATCATATACGGATTGTCAAGAGAAAGTTTTATT
CATCGTGGTCAATTTATATTAATTCAGGATATTTCTAACATGTGCATATT
TTTGATGTCAAGCTAGAAAAAATGACAAGCAGTTTTTGCAGTTTCTGAAG
ATTGTATTTTTTCTTTGGTTTATCCCAAATAATATAACATTAACATAGAG
AGGGCAGTAATAGAGGATAAAAGCCTTCTAATTTGAGCTTTCCCTTACCC
AAACCTTGTTTTTCGGGGTATCTATTGATCTAATATTTCGAACCTCTCCG
ACTGTGGTACCCAAGAGGGAATCTTCCTGTTGTGGTATATGTCCACAGAT
TTTGAAGCCTTTTAATGTTATAATTTTTCGATTTCTAAGCCTACTAAAAG
GTGTTCCTGAAATATCATTTTTAAAATTTCGGCCATCAAAGCATTATGTT
ATTATATAGTTTATTCTTATAAAAACTGTATTAATTTCTCAAAAACAGGC
AAGGAATTGTTTGACTTGGACGGTGTTGACAAACTTTTTCCTCATGATGA
AAAAATAGAGGGTGGCGGGGACGAAATATTTCTCCACGATGAAAAATCGC
CACAACCCCAATGGCCGCCCATAAGCTCCAACAGATGCTCACAATCAACC
AAACTTAAAGCCATGTACGGAACCACGCATTTTGAGCCATCTCTCAAAAA
GAAACCGATGACGTCATTTGAAATTGATATTGAATGGGACGCCCTGGAAT
TTCATCCAACTGAAAATACGAGGAAACAAGGAGGAGTTTATGTAGCGTAC
ACTTTTGGTATGAAAGACGGACCTGGAGGATATTTTGGAATACAAATGCA
TTCTGATGGAGGTTTGTTTTGATTTTTAGAATTTAACTCATATTGCCAAC
AGTAAGTCTGAATCGCAGGCCTCGATAGATATACTTCCTATAAGAAAATC
TTTTTGCTAGAGGATGAGCTGAGCCTATTCAAAAATACTAATCAAGATCC
GGTAGTCTTTCCACTAGTTACCAAATACTAATTACCAAATCATTCTCGGC
AAGATCAATTCACTCATTAATTCACACAATCGAGTTTAGGACCTCCACCA
TTTGAAATAAAATGAAATAATTTCTATAATTTCCACCCACCCCAAAATGT
TTAAAATACTTGAAAGAAGGGATGTAAAATATCACGGTCAATGAAATTCT
CCTGAATTCTTTTCTTTATGATTGATTTCCGTGATGAAGCTCTTTGATGC
TATACAATCAACATAACACTTGGTACCTACCAGTGTAATGGTATATCCGA
GGAGAAAAGTCCGAGGAACTTACAAAAATCTTTCTAGCGATACTTTTGAC
CCATCAACCACTGAGTTTCATGTAGACCCTAGAGCAACGATGTAAAAATA
ATAGATAACCAACTACCTCTAGAAGGCACTTCTCCCAAGAGAACAACCAT
TGTTTTCCTATTGAAATGAGCACTCCTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTTTTCAAAAGATAAAGG
TACCAATCTTTAGACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAACCCAAATTTTG
GAAAAATATACATCACGTGATCGATTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTACGATGCAAAATGTCATTAATATTTTTACAACCGTAACACGGAT
GTTTTTTGAGAATCAAGGCAAGTTGGTTATCTATTATTTTTACATCGTTG
GTTAGAGGCAGTTTCTCAATCCCAGCCAAGCAAAATCTTTTGATCGCAGT
AGTGATGTAGTGCAGTTTGTCAGCAAGCAAGATTTTAAAACTAAAATGTT
TTCATTGTGGGTACCCCTCTCTAAAAACGATCAAAGATGGCCGATAAGGC
TTGGTCTAGGTTTCATTAAGGTCAGTGCCATCAACCCCAAAATGTTTTAA
TTTTAGGACAATTCATTTTCTCTGTCTGGGATGCAGATCGAACATACAAA
GCAGACGGTATCAAACACGTTAAAAAATCATCAAAACTAGCATGGCCGAT
GGATACGGAAAATTGTAAACGAAATTGCCAAGATTGTGGTGTACCCTACT
TAAAAGAGATTGGTAAAAAAGGTTTCACTACTGGTACAAAGTGCACCAAA
AATCATCCATCGATGAAGGTAATACCTTTTTGTATTTTTCCGTACACCCC
TTTCTCAAAGACACGTTAGAATTTTTTTCAGCCAACCATAACGAACGGAA
TGTCTGTGATATTCCCATGGGGATTTAAATTCCATTGTTTTCAAGTCAGA
AAATTTAGTGGAGATAATTCATTATTATCAGTGGGTACACAATCTGGAGT
ATAATTTTCCACTGGGGATAATATTTTGGGCAATTTTTCCCGTGGGAAGG
GGTCCCAGTGGGTCTGTGAGAAGGGGGTGTTTCGATCTAGAGTGATAGTC
AAGTGGTGAAAGGTGTCAGTCCCTCAAGCCAGAAGTTCGCTCCTTGAATT
CCCGCTCCTTCTAATGTGCCATTCAATAGAGTAATGTATAGGGTTTGGTT
AGACGAACAGTCTCACATTTCTCGAAAGCGTGCTTCGAAAATAGTAACTG
CATTAGGAGAGGGATAGCAAATCTTTGGGGTTTACAGATATAGTCTACAG
CACACCAAGATACAGCCATGATTCACACCAATACCCTCATTAGGCTGGAG
ATCGATACAAGGTTAAATTGGAGCGTGTACCAGATCAAGATACTATCAAC
ACCGCTGATTTCGAAGGTTTCAAAAAAGTCCATCAAGACGTTTTGGAAGA
AGTTGATCGTGACGTCACAGGTAAAATAAAACTGAAATATTTACCCGAAA
AGACCCCCGTTTAATAATGAGAGAAATCCANCACAGGTAAAATAAAACTT
AAATATTTACCCCAAAAGACCCCCGTTTAATACTGAGAGAAATCCAATCC
TACTCTTAATATAGCTCCTTCGCTTNGAAAAGACCCCCGTTTAATAATGA
GAGAAATCCAATCCTACTCTTAATATAGCTCCTTCACTTATTAAATCTTG
ATAAATTATACCAGTCTAAATAGACCATTAAATGTCTAAGATTCAGGATA
AAGTTGTCCTAAATAAAGTACGTCAGGTGTGTAAAAAGACTTTTTCTGCA
ATTCTTTCATCATATCTGACGCGCGTTTATTTCATCCCCCGAGACAGCAG
CTCAGACAGAGTTAACCTTTTCCTAAATTTACGCGAAGATTAGTAAAGTT
ACCACATTTTGAGGAAGTACCTAACACATTCAGGAATTGCAACAGTAGAA
TATCTAAAACATGGCTTGTACTAATCATGCTTATTAACCAGAGTAAATAG
ATAAATTCTTGAAATATACACCACTGCAATGTCTTCTGACATTACATCAC
GGACCCAATAGCTGATTGGTTGTAAGTGACTTAAAATCAATGAATACGTC
ACTTTCAACCAACCAGCTGTTGGGTCTGTGGAAGGCAATACAATTGTATC
ATGGATAGATATTAATTAGGAAGGGATCTAGGGAGCATACCAGGAGAAAA
TCTAACAAAACGTTAAACAGTTAAAGCTTCATAAAGACAACAAAAGTATT
TTACACAATTATTTCTATAGGATCCACATGGGGAGTCAAAGTTATCGTCG
TAAAAGGTGAAAGCCAAGGTTCCGAAATCCCGATTGGAACGATCATGTTC
GAATCAGAAGAAATCGGATTCAACCGTCTTGGGACATTTGACGAAATGAT
TGGTTGTAACAAATGCAACGCTATCTATCACAAAGACACGCGATATGGAC
CCATGATCGGCGGGGACGACGGATGTGTCCGTAAACCTACAAAGATGTAT
GGCGAGACGAAATATTACAAATCTTCTTGCAAAAAGTATTTTATTTCTGG
TTCAAAAGATGAGACGAGTATCTCATTTGAGAGTGGTCCTCTAACTGAAG
AAGTTACAAAGACCAAAACACAAATTTGGTAACTGTTGTATATAACATAT
AAAGTATAACAGTTAATATATCCACAAGTATACCTAATTGAACTTTTAAG
AGTCTATCTTTATATTAGAAAAAATCGTAACGAGTTGCAACTTTTGCGAG
TTCTATATTCAAGAGCTTACTTTACCTTTTTCTTGAACACTTAACACCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061700TCONS_00061700Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061700-proteinTCONS_00061700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1467978..1473277 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.03	0	0	0	0	0	0	0	0	0	0.15	0.16	0	0	33.16	1.01	0.37	0.64	15.82	15.19	0.07	0.06	0.62	0.64	0.3	0.17	0	0