XLOC_038767 (gene) - C. hemisphaerica

Overview
NameXLOC_038767
Unique NameXLOC_038767
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_360:9041..16672+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038767 ID=XLOC_038767|Name=XLOC_038767|organism=Clytia hemisphaerica|type=gene|length=7632bp|location=Sequence derived from alignment at scaffold_360:9041..16672+ (Clytia hemisphaerica)
GTAGTGACATTCTCCAGCCTTAGAGATGAATTAATTTTGTGATATGATTG TTAACCGAACCACCGGATACTCATGCGTCATTGTTTTCTCACCGGAATTA TATGCCGGTCGCTTCTTTACCCGGTATTTTTCTCTTTATGACGCGATCCC GAACCTATTTGGTCAGCGGCTGAAAATCAATATAAGAAAAACgcaatcaa aatggtagcaaaGTTACGGTGATAATATGACCTGATTTTTTCCTGGAAGT TtatcacttttgttttgatcCAAAGATCCCCAAGTAAATTGCTTTTATGG AACGTCAAAGATAATCAAGACTCGAAAAGTTCAAAGCATAGCTGAATTTA AATTTCTACTTCGTTAGTGGATGTATTGGTAGACTGTTTGAGCACTTTTT TATCAACAAACTGACAAAAAATCAgaccaaaaaacaacaacaactggCTT TTGTTGATCTGttcatcacattttgtatattGCTACATTAAGACTTTTTA CATTAAAATAAACAGACATGACTCAAAGGAGAAGTGGTGGTCTTGTCCAA AGAAATAAGGGATTGGCACAACAAGAGGCACCATCATTTGGAGATAATCA CAAAGTTATCACAAGTCCTGATCAAAATGATGAAGAATCAGAAGAATCTA TGGATAAACAGACTAGATTAACATTAATGGAGGAGGTTTTGTTGTTGGGA CTTAAAGATAAAGAGgtataatttaaaatttagacaaaaaataaggtTGT GATGGAAAAAGAAGATCAGGGAGCCCTGGCAGTTTTTTCATGAGATTTCA TTGAGATTTTAGACCTTTCCTTATTTACAGGGAAAGGGACAATAAACATA GTCGTCTAAAAATACggctatttttttttagaatcaaccttacaatctag tttttatatttataaaaactagattgctgacgtgtggaaaggaatgtcgg cgtgactgatccttttgtttcgataataacatcaaagcgggaactaattt tcttctcctttctttctttcctttttctttctcgtaAGTTCACCCTTTCC CTCACACTCTCCAAGCGTGGTTAggtggcaatcacaaatatcttcatttc gcgtcctcgttggatctacaaagtgagtcggtcggtggTCGGTCggtaat tttcttaaaattggtctGTGAGGCGGTAAAAGGTAAAGGGCGTTAACTGA GGCGGCAGAGGCCCAAACGCGTGTACTAGTATGTTTTGCGTGGTTTCAGA TTATGAAGTTTAAACACTGTGACCTTTGACAAATAATGGTACGTGTAATG ATAAACGAAGTTAAAATGCTGTGAATGCGCTAAAAACCGCTTACAAAAat tggcaataataaaatttttgagcaaaggaaacgtcatcaaattcaaaaca aaaagtctgAAGAATTTACCGACTCTCCGACTCAAATTTACTCAATTTTC aggagtcggtcgggcgacgcgaaacgaagatatttgtgattgccgcctta gcTCAAGCAGTTAGAGCGTCTGTCTCACAAGTatgggtttccgagttcga tcccgctgggtgtcaaatttttcaatttttcaaatttctttttttaattc tctttctattataatgaaggtcaatcaaacaagtaactagcatatattac ctccgctctctgtgtaaggtttagataagctatgatagcatcTATATAAG AACtttcttaagtttttttttcttcaatcttttttttaccacaagcgatt attcaaggctgagatatagaagaacaGGAATAGGCGTTTTCGCCTGCGTT TGGTGACTGacagtttcactttcactttcactagtttcactttcagccag caAGTTAGCCAGCGAGCGATTTTTTGTAAGAGAACCGTACATTTTTTATC GACATGGTGAAcaggtttccccgatttccagatatttaaaaattggaact ttcccgtgggcgcgattgggcgtaccgccatcgcgaaatatttttcgtga aaatttaccatattctaacgctaatataatctagataggaaacaaatatt aaatctGACTCTTTTTTGGTTGTACTTCTAAATTGTAcaataaaaagaac tatttacaaattattttctttaacgggcgttgaatcgatattgacatatt taatgatgtcataattcatgccatgcatattttgtcaacatccttttcat tggataaataccataaaaataaattatacaagatgagtaaacataaattt atcgcccgcgagcacgacTTAGCTAAGCGCagctctcttattcattatct aagaattgaagtgGGCAAAGATTACTGCGCAGACTGATGGCggacaaagg ttatttgaagatattttcagttataatccaaggtagaacaaactaaacat agaaagggggtattttttagtgctctataagatgatcggtattttttttg aattctatgtttagatttttctacccagcccagttgctatgtacgcgcgt cctgttgctaagatctttgcttgaaatcgaaagtgaaaccaaaataattt agcacACACTGCCATTCGCGTAATATTGATAAAGTGAAAGGAAACCCTGA Ctgccctccactgatgcaagttacccgacttcgcggtataaaattcctta tagaaagacacattctcctacagagaggcttcaaaaatatgaggtagaaa aaagttgtcattTTATCTTAACAATTTCATAAACTACGTCACAACCACGg agcgctgacttttagttttatggCTTGTTCTCACTCGTTTGGTttccgta ataaaaagaaagtcattattgtgaactttgaacgTGCTTAAAATTGAGTT ACTTCCACTAACTGAtatatagaaataacagagtagccggCTATTTTTGT AGATGCTAAATCTAGTCGCAGAATTCTACTGGCTGTTAAACAAGTGTTGA AATCGCGTGAtgctattttttttattggaagTGCgcaaatctgattggtt aaccTTATCAACAGCTTTTTTAgcacgaaattcaaaccaaatgttaataa attcaaactgggtcatgAATATCATACTCTCATTGAGCAGCTTCTGATGG GATTTTTGCCTATATATGTGGTGTAAGACTAGGACAAAAAACGCTTCTTC TCATCAAGGGCAAAAAGTTCAACATTTTACGTGCAGCATTTGTAATTAGT CTGCCATCTTTTTATTCCCAAAATGTTACTGTATTCATTTTATTAACCAC CCATTCAGCAAAACATTGCCTCTCCCtgctttaaaaagatgtttttgatA ATGCCCTCTGcattgaatagaccttttgttAATCACAGTACTATTTTGAC TCCACAAATATATCTTTTCAGTAATTCAAACTTCCCAGAAAAAATCTGCG CTCCACTGTTGTGTATAAAAATGTTTGGGAGGTACAAGAACGCATTTTTG CCTGCAAGGGGTTTGGGAAAGTGGGTTTGCagcttttaacttttgaaaca atttttagGGTGGTATGATTTCATAGaaagaacatactaaaatttgaggg gattttgattgacagaacttaagaaaagctaaaaaaaaactttctctaaG GAAACGCAggtaaaaacaggtttttttacctccaaagagcaaacggtgga gagcatcaaaataatgcgcgcttATCTGTTTTACAAACTACAAGAAAGGT GTATCAGGATGTCATGTTGGatgattaaaaactccagcatcaaaacattA CAGGAAAGAAATTATATGGTTCACActtaataattatgcattggggtatt ccattttcaaataaaactgGGGTATTGACAAACTTCAAGCCGCTAGAGTA GATGCACAGATCGCTTGGCGGGCGTGGTACACCGCAGGAGTTTGTATATT TTGTGATGACAGACAAGCCATAAAGTTTTATTACCTGtaaacttttaaaa taaatcaaaatatgtgGAATTGTTAGAATTAGCATAGATTTAGGCCATCT TTAGATAGTGAGAAATGGTGGGTTTCTTCGGGGGTAGGTTTATTGCGAAA AACAGAGCAAAATTCATTGATCTTTAAAAACCTAATTCTAATGCACTATT TGGCTTCTCATAGTCTTTTTTTAAGGGGGGATCcgagttttcaaggaagg ctttatagggggggatgggcaattttccagttaaaatggggggtttgagc ttatagggggggggggtcaaataaaaatgagggggatagtaactttttgg ttaaaaaaatttttttttatgttacatgttgatttaagtcaataaaattt aatatcacATAATTTCGACTTTATCTGATTTATTCTCACTGCACTCTGTT TTGAATcagattttgtttttccttgttttttaactattgccaataaaaat gtacaaattatatgctgggggctcggacccctgtaaatggtgcgggatca aaaaattttaaaaatagggggggatacctttatagggggggtGNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNttcagacccctctgcacactatgctTCTATGGGACAC AATCCTATGATAGCAATTAATAGATTCTTTTATCCTTTTCGAGTCTCAGC gatcatatttatttatttattttagaatcAATGATCTTATTTGCTTTTCT TTTAGGGTTACACATCCTTTTGGAACGATTGTATTTCCTCGGGTCTTCGT GGTTGTATGATGATCGAACTTGGTTTACGCGGTCGTGTTGATCTGGAAAA AACTGGAATGCGACGTAAAAGTTTGCTTAATCGTAAAGTGATGTTTTTAA ACGAATCACCTACGGGAGATACCATATTAGATGAAGCACAGAAGCTGATT AAGGATACCGATCCTCAAGAAACTATACCTACGTGGATTGAATTGCTCAG TGGTAAGATGTCGGTTAATTTTTAGTGATCATCCTATCGTACTTGAATGG gcttttcgagaattttttttcaagtaaaaaatacgatatccaggggataa gcatctttataagagaggatatccagggggttgagcttATTTTTAAGAGT GAATATCCGGGGGGTTGGATACTTCAAAAAatcgatatcctcaacagtgg gggtaaaagtttttttctggaaaagccaaaTATTTCAGTGTAGAGTGCGG TACCCAGTTGGCTTGATAACCTAGTTGGCGTAAATTTCGACTTTGGGTAC TAATTGGACAAAGTTTATAGCGTTTCAGAGAAAAGGAGGTTCGGAGTCTT TAAAGGGGTATCTTTTAGTGGCTTATAGATAAACGGGAATCTTTATAAAC TCACGCCAACTGGATATCTATATGCTTGCAATTGATCATATTGTACATGG AATTTTAGCATCTAAATTTACGTCATTTTCGCTCCCCGCTTATCGGATTA ACCTTCGTGATACTAAATCTCGTACTatcgcaaatttttttctctcctga TTTCACGTGAAAATGCCGACACGTGAAATCAAATCCATTGAAATGTCTAT TTTACTTTCTGtgcaaaatcttcttttttctgatttcaatGTCCTCTTGT TTGAAATTAAATCAAACAAACTTGCTTTTCCTTGTTTGGCCTGAGTAATC TATACctcaagggaactaatttttgaggatatttagtaaaaattgcattt cgcggaactaattttcgcagtagacacccaaaaacgtGGAAAGTTCCcgg gaaaattagttccctcaCCTAaggttttcagaatttttgtgttttttttt gtctataTTTTGACTTTAGGTCGACCAAAAGATACTCTCCTTTATTTCAG GCGAGACATGGAACCCATTGAAGTTGAAATATCAATTACGTAATGTTCGT GAAAGATTAGCGAAGAATTTGGTTGAGAAAGGTGTACTGACAACAGAAAA GCAGAACTTTTTATTATTTGACATGACAACACATCCAGTGAACGATGGGC AAATCAAACAACGTGTCGtaaaaaaagttcaagaatCAGTTCTCACAAGA TGGGTCAATGATCCGCATCGAATGGATAAGCGTACGCTCGCTCTCATTTA TTTGGCGCATTCGTCTGACGTTCTCGAAAACGCGTTCGCTCCGCTCAACG ATGAAGATTATGATTTAGCGACGAAAAGAGTTCGCGAACTTTTAGATTTG GATCCTGAGGTGGAAGCTCAAAAACCGAATGCTAATGAAGTTATGTGGTC CGTTATTGCGTCATTCATTAAATAGGATGTGCGAAAACCATGTTGGTTTT CGGTATTAATGAGGATGTGCGAAAACCATGTGGTTCATTGAtctggattt tttttatttattaaacAATGAATATGGTCTTGTCTTATAACTTTTGTTAT AAAACGTTGTAATACCTGATTattaaaagtagaatttttttgtttaaata agTTTTTTCCTGGAGTGGTGGTTTAAAGCACAGAGGATCCAATAGAAAAT ACCTCATTAAGAACAAATGAATAGTTTTGGGGAATTTTTAATGCGATACT CTGATACACatatcaaagtatctcaaaacATTCTAAAATTAAGAGCGTTT TTACTTTACTTAGCTtacatgaaaaatgaaatgaaaaatatcaattATTC CTTCAGTAGCCGAATTTTGATTCGATTTTCAGTAttcaattttgcaaaaa attttaaaccgtTTTGCTGTtaaaagtacacgtttttttataagaacatc caacatttttgaagcctttggatgttcttaactttttgggttacaagcct aaaaatgtttttaaaatgttcttattttcaccattttgtgaccattttca cccatttttctaagaaaacgggtgtttttgagtccacaaagccttaaaat gttcttaacttgtttttaaccattttggccatcgaagcctttatgttctt atatagtttgttcttataaaaaaacgtgtattttggAATACATGATAAGC AAGCTCCGGTAAAATtcttgttaatttcattaatatTTACAATAGGGTGA ATGGTATAAGTTATGGCATAGTTGGGCTacgatgaaaatatttttgtttt gagtaacTCGGATCAATCATCTAAAAGGatcatataatatttttttacgt TATATATATGATCCTAAGCTTTCCAAAGACTAAGCAATAATATGGTAagg taattagtttttaaatTAAACTTAGAGAAATGCTGAAAGTTTCTCAATAC GTCCTCGTTCCAGTTTGTCTCGATCACTTTTTCCAGACTAGATATCGAGC AACTTTCTTGTTGTCTCTCTCTTTAATTAAAACGTGTAGGGTATATTATC TCATCATGATCATTATTATTGTAAAACTATTATAATTAttcgtttatttt ttatatactttttaaaTGTTATTTCCTAGAAGCAGGTACAGTAGTAAGTA AAGTAAtgtcattttacttttttggtCAAATCTGGAAACAAAAACcaatc attattattattaaccgCCAGACTCTTTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061777TCONS_00061777Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061777-proteinTCONS_00061777-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:9041..16672 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GOLPH3Golgi phosphoprotein 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.95 41.73 73.64 78.92 82.8 61.07 66.29 68.4 55.98 50.86 35.85 39.9 31.25 24.68 29.63 29.28 46.5 42.47 24.22 37.21 43.37 44.17 41.73 45.84 28.94 32.52 51.39 40.79 48.87 44.65