XLOC_039007 (gene) - C. hemisphaerica

Overview
NameXLOC_039007
Unique NameXLOC_039007
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:115878..123554-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039007 ID=XLOC_039007|Name=XLOC_039007|organism=Clytia hemisphaerica|type=gene|length=7677bp|location=Sequence derived from alignment at scaffold_362:115878..123554- (Clytia hemisphaerica)
GGGATATGGTTATATAGGTCTCTAAATCAAAAGAAATCAGACAGTTATGA AAATATGGAGTTGAGTGCAGTGTTAATTTTCACACTTTTGATAAGTGTTT TCTTTGCAATGCATGATGGTTCAATTTTACTTAAGGAAAGTGGAACCGCA TCGAAGGTTTGTTCCAAAGAAGACCGTTCTAATGATTTAAACAAGAAACA NTGGAGGAAATGCACAACACTGCCAAGCTAAAGGTTGTTCCTCTACCTTC AGAAATGGAAACCTATTTCCAATTGGTGATCCGAGGAATTGTTTTTTACA AGACAACACTTTAGTTAGAATGGAAGTCCTTCCTGGCACTGGATGGGATA ATTTACGGAACCTGGACATGAGTATGGTTGTTTGGAAGAATTATTCTCAA TGTTTGACCAGTGACGATGGCAAATACCTACTTCCTGACAACATTTTTGT TATCGCTTTGAAGAAAAGTAGCGTAGAGTTAACATCGGAATATTTCGATC ATTTCAGTGACTATACATCATCTACTTCTACATCAATCAATGCTGAAGCT CATGCTTCTGGTTTTGGAATAGGAGTCTCTGGTAAATTCTCATCCGAATT TCAACACATCAAGAAAAGCCAAGTCGAGAATAAAGCTGTCACCACTAAGG TTCAATTAAGACATAAATTCTATACCGTGAAAGCACAACCTGGTATACAA TTACATCCCAACTTCAAATCAAGGCTCCTGGATATTGCAGCTCATTTACA GTCTAACAACACTAGAGTAGCTCAATACTTGGCTGATTTAATCGTTAGAG ATTTTGGAACACATTATATTACAAGTATAGATGCTGGAGCTATTTTAGAG AAAATTGATCACGTTAAATCAAGCTATGCAAAGAGTCAAGATACTGATAG AAGTAAGATCACAGCATCAGCCAGCGCTTCGTTTCCTTTCGGAGGTGTAA GTACGTCTGCCTCTCACGCAGCAAACAAATCTAACGTGGCGGCTTATCAA AACAATGTAGCAGGTTCCAGTATACATACTCACGGTGGGGCACCGTACCG AGCAAATTTTACAACTGACCAATGGGAAGACAGCTTAGCTGATAATCTTA TTGCAATCGACAAAGCAGGCGATCCTTTGTATTTTGCGATAACGTCAGAA ACGCTGCCTGAGTTACCAGATATGTTGGCAATACAACTTTCATCTATTGT TGAAGATTCAATCAAAGCTTATTATAAGCATAATATTGTTAAAGGGTGTA CAAATCCTGACTCACCAAGTTTCAATTTTGCAGCCATCTTGGATGACAAA TCGTGTGATAAGTTGTCCAAGAATTTCACTTTTGGTGGTGTGTACCAAGT CTGTAATGACAATAGTGGTAAGTTTCATTGGCTTCGTTCTAGTGTGGCTC AGGGCCAAGAGGACTATATCTAAGAGAAGAAGGGGAATAGCGATTCTCGG TATACATAACTGCATTGTGACGGCATTATACACCTTTCCCGAGTTTATTT CGACTTTTGAAAAACACTATTCAAAAACCCTGCTCTGTTTCTTGCAATTT AATGACTTCGAATAAACGTCGTTAGGACAATTGTAACGCATCACAGCTAG AAATCCACCAAATAGAATTTCGAAAGTTTCATATGAGAAACTTAAGAGAA TACGGACAAGGTCTCAAAAACCAACTAAATTTTGGTTTACGATTATTGTA CATACAGCCTAGTTTTCCCTGACTTTCTCTTTTAGCCAATTTTTCATTTT ATCAAGGTTTTCTCACCAAAATAATTCATTTTTTTAAGATGGTTTTTGCC ATGCAAGATACCTGCAAAAAAACTTCAAGACAGATGATTTTAGGTGTCCA GAAGAGTATCAAGATATTGCAGGCCATCCAACAATAAAATATGATGCCAG CTGCTACCAAAAATGTAAAGATGAGAAAGATGTGCTCAACATTTGGAGCG ATTGTATTTCAAATTGCATATTTGCATACTATCAGCCTCATTGGTGTGCG TACATAGGTATATTTACTTTAATAACACTTTTAATGAAGGGAAAGTTCCC GGGGAGAATTCAAAGTAACACGATTCCTGCTCAACAAACCAATAAAACCC ATGCTTTTAAGCCTCATATTTTCAGGTTATTGTCTGGTTCGCTATCTCCT TTCAGAATTTTTGTATCCAGAAAATTTCTCGATTTCTCGAGAGAAACTTA AAAAAGAGAAATTGAAATCCCACAATAAAGGCTGGAGATTTTCATAAAAT ACCTATTTTCAAGAATTTTAATTATCGTAAAGTGTCGTAAAATTCGAAAT TATTGGAAATTTTATCAAAAATCCCTTCAAAAAATCATGTTATTTGGACC TAGAGATTACACAAATGACTTTAAGGTCGTAAAACCTTTACTTTTTAGAT ACCTATACTTATGGTAGGTGCGAAAAAAAAATCATTTTCTTATCCATGGT TACACCCCAAAAAAAATCATAAGGCCCTCAAAAGTTCTATTTTAAAGCTC ACTTATGGTAGTGGCCAAGTCTGAAAATCGACTTTCTCAAAACATGGTCA TATTGCATACCAAAATGTCACAAATTTGATGGAGATTCAGAAAAACATTA GTGACATGCGTCAAAAATGAAGTGAATAAAAGTTTGGACCCTTCGAAGCC GTTTTTCGACAAATAAACAGGCGCAATTGCATTATGGGTAAGAAATCCTG AAAATACAAATATTGTTTTGGGAATGGATTTCTAGCAAGTATTTGATCAA TTGAATCACGGTTCAGCACCTGAATTGCAATTTTACAGTTTCAGTAAGTT GTGAGTAAGGGGTCGATGTTTGTAGGTTTTAAGGTGTAATTTGATTTTAA CGTATAGTTTTGAAAATATTTAGGTACAAATGATCTAATTTTAGCATTAG TAACTTTGCAGTTAAACACTGTTCAAAATTTGAGACCAAAAGGACTATTT TATAAAAAGTTATTCAAGAAAACCATTTTGTAGGTTTTAAGGGGTAAATC GCTAAAATTGCATTTTTTCACCAAGCAATAAAAATTTTCTTAGCAGCTTT TACAAAATACCATACCCAGGGAAGAAATTCAAAGGTAGCCTAGACTTACC GGAAAAAGTTTCAGCCCTTACTGTTTTCTCTATCAGGATATAGGGGGTAC CTTTTTTTGTTGTAGGTTTTAAGGGGTATCCACTGGTACATTAAGAAACA AAAGCGTACTGAAGCTTTGAGCCAACCTCGTTCCCTGTGTATTATCAGCT TTTTGATGCTTACTGATAGCGCTAGATAATACCCTTGACATTTTCTACTT TTCGAACGCGTAAGATTACGTAATCCAAAAACAAAACGTCAGATTTCATT TGCTCTTCGATTTTGTAGTAGCGGGGCTGCTCATGCGGGTCGTCACCAAA GGTGACATGTCGTTGTCTACTTTGCTCTGTACGGGAAAAACACCAAAACA CCGTACAAACAAAGTTGACATAATGCCGTACATCAAATATCGAACTTGCT TTCACCCGCCATTAATTGCCTTACTCGCCATTTCCCTCGCCGCTTTAGCC GTAGCCGTAGAGAATTCCAGATACATAATCTCGCTATTGTACTGCAGTGT AACTTTGTAACGTCATAAATTTTATGACGTATTGTTTTGAGGAGTTCCCC CTCTGTCGCATCAGCCAACACCGGGGTATTCTCTGACGTCCATCAGTAAC GTAAATAAAGCCTGGAATACATGGGGACGAGGTTGGCTTTGAGCACCTTA TATTTGTCGTAAAAAGACTTTTGAAAAAAGACTCATCACATTTTCTTGAA GGTAAAACAGATGATCGAGGATATCTTTTTGGAGGTTTGTACAATAGCAT TTCATCAAACCCTTTGACCGGAGATAAAAGCTGTCCACCAGGGTTTTATG GACAATTATTTGGTCCGGAAGATATGGTTATTTGTATCAGTGACGATTAT GAATATGGGTCACATTATTCAATTCCCTTTGGTGGGTTTTTCACGTGTGG CACAGGAAACCCAATGGCAATGACAAATCCTTCAGGTTTGTGCTCAGTTT GACATTTTTTCAACTCCAAAACATTAGAATGTGACTGAAATCAGACGGCG CAGAGATTTTTAATATATGATGAAGAGATATTTGAGTTTAAGATCAATGA TTTTGTTAGGTCAGTTTTTGACGATATTTTAGGTAATCAGCGAATATCTC ATGATCTATCCATCGAAAGAAATCCTTTAAACTATATCATATTTGGGCGA ATAATGGCGTGACAAGGAAATATGACGGATTTTGGGTCATTTCCAGCTAT TTTAGGGGGTCCAATTGACAAACATTTTTAAAAATGTGCTTAGCAGGAGC TTGTAATGAAAATTGACGTCATCAAAAATTGCCCGAGAAGTGTCCAAAAC CTTTCGATTTAATAGTAGTTTTTTTGGATCTATAACAACCTCTGTGCCAA ATTTGAGGCACATATTATTTTTTTCAAGGTAAACTCCTATTTCTATTGAT CCAAACAGTCTGGGTAGCCCCTATAATAAACGATATCGGATTTAGATAAA TGCAATGCATTCTGGTTTCTAGGGACTTTCAAAGGAATTATAATCTATTA TAATTGATCTATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCAT TGCATTTATCTAAATCCGATATCGTCTATAGTCATTACTGTTTCAACTGA ATTTCTTGATGATATTTTCTGATTTTAAGATTACATCGACGACTGGCCAA AAAGTTGTCCACAAGGCTACACACAACATTTAGCAGTGATCGACCAAGGC TGCGAGATCAATTATTGTATCAAAGGAAATTCTCTCTCCATTAATGGTTT TGCAAATATGAAACGCCCGCCTTTCAGATCGAAACCCAAAGTTAACATGA ATATTACAGTTCCTCTAACGATTATAAACGACAACACAGGAAAGATATGG CTTAAAAATCCGAAAAATCAACAATGGATTTTGGTTACTAAAAGGTAAGA CTAGTACCCAGGTTGCGAGCTGACGGGGGTGCCACCCACCCTTAGTAGGA CTGAAATTTGATTTCCGATTTTTCCGACCCTTCGCGGGACTTTGGAAATC CAAAAAAGCTACCCTTAAGGGCGGCACGTACCCTTCTTTTGCAAAAGTTT TCCCCGGGGACTAATATAGGGACATAGGTTCGCAGAAATTAGACAACAAA ATTAAAAAGGAGAAGCATGGGAGAAGCTTCCACTGGTCAACTTATAAGGG CTTAGGATTATGTAATTGCAGAATTCACACTATAAATTTAAGAAATATTT AGACAAGCTTCCATTGCTCAATTTATAAACTTCTAACGGGTAAGATGTTG GTTTCGCAGAAATCACACTAAAAATTTAAGAATTATTAAGAGAAATCTGC TCAACTTTTAAGGGCTGAGCACTCAAGTCCCCGGTAGGAAAGAATTTGAA GTGAAAAGATGTCCACACAAATCATAACAATCTATCTATTTTCAATTTCT TGAAATCTAAAAATCGCTAAAATTCTGAAAGCTTTTTTTCCAAAGAATGT TAAGTCAATTTATCTCAGAATGCATAAATATTAAAGTATATGTTTAAGTA AATAAGTTTGCAACCGCAGTCGAGGGCAATCCGAAGGCTCCCTTTTCGTA AAGCTGTCTACCTGAAGGTAGGGGAAGGCGCCACTCCTTTCCTTGGATTT CTCCACTTACCCTTGATCCGTCTCTTTATTTGCTGAGGATCAAGCAGAGA GGAATCTTTGGTATGACCCGGCTGGGGCTCGAACCCATAACCTTGCGCAC CGTAGCTAGATGCTCTACCTTCATGCTAAGGTCGCTATATATGTTTATGC ATACACATCATCAAATGTTGTGTTTTTTAATATTATTTCAGTTTTGTATT GGATCGGCTGGCTGAGCGTGGAATTACTGATCTTGCTCAAATCGGGATCA AGAATATTGCAGAAGATGAAATTCAAAATAATGCAGAACGTAAAATGTCA ATGTCAGCTATCGATATTTTGAAGAGAGCTCTGGTAAATGAATCACCAGC CAATAAAAAGGAGGCTCAGATCTCTAAGTCTACAGGATCAAGTAAAGGTG ATTCCCAACCAGTTTCAAACGGAACAGCTGTGGGAATCACCATTGGTGTT ATTGCAATTCTTTTGGTCATCGTTTTGATGGTTTTTGCGAAATGTCAACG AAAGAAAAATCAAAAAAGATTCACTGAGATTGGTGCAGGTGGTTCAAACG GACCCTTCAATTCGATGCAAACGAGCCATGAATACCAAGCGATGTGATTT CGTAACAAGAGGCAACGACACAAGCTTTGACTAGTAACATAAAATATATA GCATAATTTGACTTATCAATCGAAAACTTGAGTTAAATATTACGAGGCTT TTACTCAGATAATTTTCAAGATTTTGCATGATTAGAAATGTTTTTTTAAT GTGTTTGCTTTTTTTTTTAATATTGTGAAGATTTCGTATTTTTCTGATCA CTTTTTAGACGCTACGGACCCTCTTAGCGAAAATTTATATGTATTATCGT CCCAAATAAATGACGTTTTAAATCGAAGCAGGTGACAATAGACCTTATCG GAGTTTTTGATTTTTCTAAAAAAGCGCTGCATTGTGGGATTGTTTCGAGT GTATTACAATAGAATTCCTCCGAGGAATTCCTAAGAGATTACTATTGTAA TACACTCGAAACAATCCTACAATGCATCACTTTTTTAGAAAAATCAAAAA CTCCGATAAGGTCTATTGTTACTTATAATTCTGGGAAACGATCTACTTTT TTTCATAGCTGTAATTAAAATCACTATGGTATCTTAATTTGTTACCAGTA TTGATATATAGAATGATTCAATTTTTTTTTAATTTACATATTTCTTCCTA GCATAACAAAATAATTTCTAAATACTTATTATGATAACCTATATTTCTAC AAACTGAATTAAAAAAAAACTACCAGATAAATAATGATAGACATTGTCTT TTTTTGGTAAGGGCCTGTCTCCACTTTAGCGCGCTTCGATCGCACCTTTT GGCTTCGATCCTTTTTGCTTGGAAAAAAGATTACATCATAAAAATGCAGC GCGCGCTCGAAAAAAAAGTTGAATACATTTTAACTTTTAACCGTTACGTC AGATCGCACTAATGGAATTTCTTCATTTTTCTTTTGACCGATAGCGTGGA ATATGGGAGCCTTGCTCGTTATCTGGTACCAGATGTGGAAATATGCTACG ACACGCTTTGCTCTGAAGGTCGGGCATATTTCAACATCTGGAAGTTTTGC ATTACGGGATTTGACTTGACCGCGTTTAAACATTTTGTGAGGAGCTTGGA AACGATCAACATAGCAAGTTAGCATCTAATTCCATATCAGATGCGGGTGC TAGGCAGAAAATAATAACAAATCTAATTCGCATCAGATTTGTTATATTTT CTAGGCTAGCACCATATTCAATATTAGCACCATATTCAATATGGTTCGGA ATCATATTCATGTACTAGTAAACAAACATAAACAATCCCTAATTTAGCTT CATTTACATGAAAATACAACTTAAAACATGTATTTATTGCTTTTTCCTAC TTACCTAGACATACTCGATAAATATTACACTAACCTTCATAGTTTTCAGG ACCTCAAAAGTGAATTTTCAATGTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062224TCONS_00062224Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062224-proteinTCONS_00062224-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:115878..123554 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MPEG1macrophage-expressed gene 1 protein precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.49 0.28 0.35 0.39 0.29 0.26 0.24 0.23 0.22 0.59 0.19 3.74 2.94 15.66 15.42 2.84 3.65 45.58 50.35 6.45 5.47 17.89 22.18 51.03 20.37 3.97 6.07 143.2 146.5