XLOC_039041 (gene) - C. hemisphaerica

Overview
NameXLOC_039041
Unique NameXLOC_039041
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:162083..164122-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039041 ID=XLOC_039041|Name=XLOC_039041|organism=Clytia hemisphaerica|type=gene|length=2040bp|location=Sequence derived from alignment at scaffold_362:162083..164122- (Clytia hemisphaerica)
CAGTTGATGAAAAATTAAATTGAAAGCAAAAGAAATAGTTTTGCAACACA
CCAAAGTAACCAAACAGCAGAAATAGTTGGTTTATTTCAACGTAGTGATC
ATTTGACTCATGAATTTGGTTAACGAAATAACACACGGTGGAATTCACAT
AAACAGAAAAATGTCAAACTGGACAGGCATTCTACCATCATTAATAAACG
GGTCAACAACTACGGCACCGACAGTAAACGGCTCACAAATGAACATCACA
TTCGGTCCATACTGCCAATCTTATGATAACACTGCTTTGAATCGTGTGAT
TTTCGGTGTCCTAATTGTCGTTTTTATCGTTGGTTTTCTTGTCAATACAT
TAGCGGTGACTGTGATTCTAGCCTCTAGATCATTACGGCGACAGTGGACC
AACTTATTTGTGGCATCATTGAATATATGCGATATCGGAGTTATTTTATT
TGTGGTTTCGTTACGAATCGATGATTATCTTTACGACGGTTTTTGTTTCG
ATATTCATGTTTGTCGTTTATTCAATATCGCCGATTCGATATTTCATTCG
TGTTCTATATCACATCTTTTCGTAATGGCTATCGAACGATTTATTGCCGT
CCGTATGCCATTTGTATACCAGCGATATTTTAATCATCGCACGACCATTC
AAATCATATGCGCAACTTGGTTATACTCTATCGGATGGGGCGTGGCAGGT
AGTTTTAAATGGGACGCACAGGATGGAATTATCCAATCAAGTTCATTCAT
AAACGAGGGTGTGAAACGCAAATGTTTGGTTGATAACACTTATGGTATGT
TGGCTATCGTGTTTGTTATTTATCTTGTCCCGTTGATCATCATGGCTGTT
CTGTACGCCCTCATCTTGAAGACAGCTCTGGAACAACAGAGGATGATCTC
CTCTTTAGCTCCATCATATTTACGACAAGATGACCACGCAACTCAGAAAC
GAAAACAAGAAGTTAGCGCGTCTAAAACCGTAGCTGTCATCTATGGTGCA
TTCGCACTATGCTGGTTACCCAATTTTATTATCATCATCATTTTACAACA
ATGCCCGGAATGCATAGTACCATTCCAAATAGAACACCCTGAACTATCCA
AAGCAATATTTACAATCTTCATTGTCCTTTTACCAGCTATCCATAGTTGT
TTAAACCCTTTTATTTATATCATATTTCATCGGAGGTTTCGAAAAGCATT
TAAGATTTTACTACAAGGTAAATTCAAAACATTGACTGAGCACTCTTTGA
GACGAAACAGCGCGAAATCAACAGGATCAAGTCCGAAAACCATTGAAATG
ACCATCAAAGGGAGCTGAGTTGAACACTTCGACGTACTAAGCCAACCTTG
GTAGAAACATGGCAGAAAAGGATTGTGGGCTGATTAAACATTCGTTGTAA
TTAGACCGTTAACATACCTGAGTAAGGTATGTTACCCTGCAGAGCAGGAC
CGAGGACCGAAAAAATTTTCGTTATCACCACATCATAGACAGTAGAACAC
TTTAAAACGTGCAGACCCAATATGTTATGACCACGGTAGGACAGGTCAAT
ATACCGGTCAAACATTGTAGTTATAACAGTAGAATATGATTTTCTGCTAA
TCCATATTTTGTCATTTCGACGGTAGAACGTATCAAAGGAATTTAGGTAA
TTAGGCGTCAACGGGCCGTTTTTCAAACGCTTTAGTATTTTTTCATGGAG
CAGAGTTAAGTGTGATCTGAATTATTCCAGTCAAAGAAATCATCATTTAC
CAAGGCGCATTGCCTAACATTGCATTGCACAACTATACGAGTATCAAGCA
GCTGCTGAAGGTCATCCCAAACATTAGCATTAATATACTAGGCTCTTTAC
AACAGTGCGAACAAAACCAAAGGAACTTAATTAAAGCAGATAGCTTATTC
GACTGGAAGTATTTTTAGTTCATGGTGAACTATATGGCAATTATTTTTTA
TATGTTAGTACATAATTTATTAAGTATATGATCGTTACGTGTCAATGTCA
AATCCAAAATGTATATTTTAAAAGATTTTTTACTTCGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062302TCONS_00062302Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062302-proteinTCONS_00062302-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:162083..164122 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HTR2A5-hydroxytryptamine receptor 2A isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0	0	0.04	1.28	1.16	0.47	0.89	0.1	0.38	0.14	0.12	5.79	5.94	0.18	0.67	1.75	1.28	26.59	26.17	2.62	3.84	1.56	2.16	3.49	2.19	2.68	4.37	5.81	4.12