XLOC_039064 (gene) - C. hemisphaerica

Overview
NameXLOC_039064
Unique NameXLOC_039064
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_363:57442..67031+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039064 ID=XLOC_039064|Name=XLOC_039064|organism=Clytia hemisphaerica|type=gene|length=9590bp|location=Sequence derived from alignment at scaffold_363:57442..67031+ (Clytia hemisphaerica)
CTGTTTTGGAAAGATTTCAAGTGGAAATTTTCATTATTGACAAGACAAAC TGTAAGTTTATCGATATAAAGGCTTTGTTAAGTTGGAGGTAGGACTCTAG CCTgtatatttcttttttacatTTAACTCAAATTTCACAGTCTAAGATTG TTTGATTCTGTGCATGATTCATTTGAATAAATTTGCATAATTAATGAAAA CAATGGATTGTCTTTGCAACTTGACTGTTCATTCACTTAATCGTTCAAGC TATGCATTGTGACGTTGCCAGTAGCTCTCACTAAtctattttcaaatttg tcaGCCCACTTTTCTTCTTTGTACTGGATActgttttaaaggttttgttt taaaaagacgcagtaagagtgatatcgtttgcttactcatcaattttatt tcacaagctttttcgcattggattgacacggatgtggagcaagattgggc AGAAAGAGGAaagaataacattttttggTTATATCATTATAATattataa caatagggagacactgtcctgatatgaaatatgtgcctgatatgaaacgg gaacacttacgtaaaaacaaaacttttaacatGATGTTACTTGTAGTTTA AGTTTTCCCTCTAaaatttttcgccaaaatattcgcttttctaaaaaatt aataaacccTTGTATACAATATAAGTTAAATAAAGGGCAATAAAATAGAG TAAGAATCTTATTATACTGAAAAGTCGACCTCAAGATTTTTCTCATAATA TAAACACTGGttaattaaaaaaagggggggacAAAACGGGGCAAATCCTT GTCTCTTCCCCTACTATTTTATTAGTGTCTACTCGacattcttgaaaaag aaaactttaaaaaatatgaTAAGACGATACAAAAAATTTATCTGAAACAA GAGAAGAGATTTTCATAAAATGGTTCGAAAAAATTACttattatattttt tcctttaaaattaaatgaaaaatatcacATTATAGACCCCCCGAAACAAT TCATCTCGTATAGATCATTATTAAATTTTATCCCGTCTTATCTTGGACTC AAAAATATCATACTTTTTCAATGGGACGGTTGAGGTTTTTCTCGATATTG TAACCAATACGTATTGAATGCTAATCTGTAGTTTTGACTACGCGTATTGA TCTAAGTATGTATGTATCAATGACTCTTTGCCTTCATCAATACTTTATTC CCTTCAATTTTACGAATTTCCCTCTGTATAGATATAGCTTCAATGatgct tttcttttttcttagtACAAAGTTGTTCGAATTTATGTTGTTATTTTCAC TGCTGTAATTTGTGCTGTGATTTGTGCTGAGatgtcgttcttttttttat tcttgaAGGATCAAGTTTTTTCGCTTTTGAAAAGTAGTCAGATACATAAG TGACGGAAACTGCATTACGATGTGAAATAACGTGCGATTTTTGCATGATT TTGGTGGGTCTATCATCTCCGCTCTTAGTTATCTACTGCAATAGAGTCAT GGAATGGCTAGCTATGGGCatgggaaaaaatgaagaaaaaaccgGGAGTT TTGATaagaaaaatgtttgaagaGAGATTACGAAAAACGTTTTTCCCGCT AGATATAAGCATTGGGGCGCTTATTTATTCTTCACAGAATACCCGTGAAG ATGCTATTTCGATGTTCCTCTTTATTTCTTCTTGTTCCTTTCGGTATGTA ATGTTCCTTTTGGTATGTAATAGTTGTCATAAAAACAAGAatgtcaaatt ttgacacgCACCATTTTTAAtcctcatttttcaaaaaagacgcTGCTGGT TTCAAAGAAAATTGTTTATCTCGTCGTGTTTACATCTAAAAATTGTGTAA GATGCAATATTACCAAATATTGTTCCTTTTACGTGAGGGAGAAGTGTACT ATGAACGATAGCAATCCCCCAGTCGCATCTAGTCCTGTCACTGAGACCCA GGTGAACTTGCTTAGAACACttagacaggggtgtcttaaaATGCTGTTTC ATTCACATTTTAAACTTGTTTTTCAGATTTAATATATAATTTACAAGCTT CGAGAGCAATGTTTATATGTCTCAACCATGCACTCCAACTATGCATACTG TTCTTCTATTTGCGTCTAGGTAAGTCATTTTTCAGGTATTTTTAGATTAT CTGGTGAATTGCATTGAACTTCTTTGAGTTTTTAAACCTAAAAGGTCCAT AACAATCAATATTCAACAGAAATCCAATATCTTTCAAAATTAGTGAATCT AATACGACTATTGCACGGCGTGTTAGTGTGTCGGGTTTTATTAATTCAAT TTTACtgggaaaagaaaaatagaacgGTGACAGGGTTAAATGAATGCTAG TGTTTATTGTAGCTCCAACTTTCTACCCGGCTAGAATCCAGGCTAATGTC ATTTGCGTTTTATTTCGTAGTAAATAGCCTCGAAATCAAACGTATCGGAA ATGGAGAAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAATTCACTTGG AAACTGGACGGTTTACCTTCAGAAGATGCTAATTTACATTTCCGACTTTA TTACAAAGAAAAGTTGCAAAAGCAATACCAATTATTATCCGCAGAAAACA GCGGAAAGAAAACGGAGACTTTGAAACTGGAACAAAACGAACATGCTGAA TTAGGACCCTTTGATTTAAACAAAATGTCTGGTTCGTGTCAGATAGATTT ACCAACTGCCACATGTACTTTTCAATTGAACGAGGCTGATTATACACACA CTGGAGAATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCATGGGTCAA ATTCGTGATCGAATCAGCCTCAATATCGTTGgtaagtttgttaaatttct cttgtgaaaataatttcttgactggaagatttttaaatttcggTCAAGTC GAAAACAGAGAAATTACATGCGACTGATTCCCTTCGGTAGCTAATTCGCT ATGTATTAAAGATAAACCATAGTTCGTATAAAAACCCTGGTTTGGAAGCC TtctgtttctttccattgtttcttacttgaacttacTTTGAGAAATTAGA tcgttttgctcactttttgatcatgtgatcgaatcttaaaccaatcccaa gaggagtacatacttggtaacgtgatcaaaaactgttgcaaatcgatttt tatcttttgacattaacaaaggaaaaagctaacaaaaagttaaaacaaaa agCTTCCAGACTAGAGTTTTTGATACAGACTATGGGTAAACAGATTTCTG AGGTAATCAATGTTACTACTGAAATATGTGTGTCCGCTTATTCTAAATTT CAGATTTGTCTTCTTAGGCGGTCCGGACAGATGCACAGACATTATGCCTC CACAGAATGTATCATGCTACATCAATACTATTATGAAGCTATCTGTCGGC TTTTGTGGTAATCCTGAACCGAAACTTGTCTGGAAAGTTGGTGGTGTTGT TATTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAAT ACCGAGTTCAATTTGATACtacaaaagaaaaatgtggtCTGGTTGTCTCT CATAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGAT CCTTTCAAGGCCAGGTattgaaaattattgttttctttaaatcaaacata caaacaaaacattttttgacgATTTATGTTTAAGTTTCTTTCTAGAAGAT CTATTCTAAAAGTAAATTCAAAGCTCGAACGTTCAATTGTAAAGATTTAG ACTTGTACACGATTTAGTAAATTGCTACACTCGAGGGAAAATCTCATTGC TCGATAGATCATTTTGAGTTAATAAAATCCAATCAACTAAAAAAACTTTG TACTGTGAACCATAGATTGTATTGATCTTTACGTAAAAGGgaaattcttc tttaaaatgaagCGCATTTACTAAAATTTTCAGTTCTAAATATTATTTGA AATCTAAAACTTTGTCTGACGTCTAACAATGTTACATCCACTGActttta tataccctggaccaagcttctcaatcccagcaaagcaaaatctttgattg gagttttttgaaaattggtaccctaatggcggcactactcgataacggtg taaatgcatcgagagcgctaggtctacttttcctcaaattcttttgatga tgtagcggcgttagacgttaatttttaacattgcaatggcttctcctcgg taccaattccaaaaaaactccaatcaaagatggcagacattgcttggtcc agggttatataaaggtcagtggtttaTCACAATTATCCCTGTGTTTTAAC ACCCAGATTGAGTAGTAGTACCATTATggtatcatttttttaaaaacttc gaaccaaagatttttttgttgGTCGGGATTGAGTAACTGCCTGTATGACT CATTCCAAGCTCATTGACTTCAacacttaaagggacattaaagtagtaaa atgtaaacattgtgcgaaccacgtgtcattaaagagaacaattaaaatca cgtgtccaaaacaaacttgtaaaacaattgaacaataaaaattagccata tttggcttgatgttttattttgacatgtgacatttgttttgattttgtat ctgctgcatacaatttgtttacaaatttcgcaagtactgttatgtccctt taacttCTAAATCTTTATATCTTAGAAACATTAAGTGGATCGCCAGAAGG CCTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTC TTCTCATTGTCCTCATCGTCATATGTTGTCGTTATTGCAAGAACAAAAGA AACAGTAAGTTGATATCACAAATCCATAAGGAAGAGCTAGATAGGGTACT TTGGCTGAAAGTGTGCCGCCGTGATTAGATAGGAAATCCTATCTATGCCA TGTGACAtcacaatagaatttcagcgcttgaccaatcagaagtttCACGG ATTTGGATTATCGGTATTACGAAGTCCCGTACACCCAAtaaagtataagc ccgaagggctagaagtcaatctccttgataggatttgaagccaacaaatc ctaccaaagttgcgcggccttgagcgtcTCGCCTGATGTTTACACAAATA ACAGATtggaactaaaatttaccgctaaatttcgaaaaaaatatcaatcg taaacaaaggaattgctagattcaatctatcgtcaaaaatgcggtgcatt ttttaaggcttcactttttcttgcctgagaaaggttagagattgaactct agcccttcctggcccttcgggctttaaactcaatgcgtaCACGTCCCCCC CCCCACTAGCAGCTCCTTCTGTCCATTTCTTCTTTATGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccc cctgcatgATGATGTTACGTtcaatttgatctttttttccaTTTGTAGAA AATCCCAAGAGCAAGGAAGGGGCAACTTGGTAAGTCGAAGCTCCactgtt tttcgaaaatctcaatgtaaaaaattacaCACAGAACACTGCATACTCCT CTAATACACGAGTTGCAAAATTATATTGATGGCAgacaaaacatgtgatt actcgaaaaagttcacgtgattttattccaaTGTTacttaccgtgaaaag cacagatcaaaatcatatattaacgctgtgccgacgaatcgagattctat tcatcctGCAATTAACGAAGACAAAAggaaccatgacgaccatctaagat cttggatgaagttcaaagttgatatttttattcctgtcgttgaaaacaca actaaaaaatatcatcaatgcttttcaaaaagagtcagtgatagagaacc ataacataaagtctgtctattatttcgattcaattaaaagtgacatttcc ccaggggatgtcaatcgaagcGATCGAAGTGATtggtcgaatcaatcgaa gtcaatcgaagtgattgtcgAATCGATCGACGAATGGATCGAAGTCGATC AAACccttaaaaaaatgtaaatcttcgattgacttcgatcgacTACGATT GACTTTGATTGATTCGACCAATCACTTCGATCGACTTCGATTGACTCACT CAGGCACGGATTTTTCACTTATATCCTTAGGATCCTGAGCATCCTCAAGC TTTAAGAGGATATCCTCAGGATCCTCTGTTTTGCCTTGAATACGGCTTGA TAAAAcatcaatattttaatttcCCAAGGATCCTTAGCTAACTCATCAGG ATCCTCATTTTTTATCTCttcttctcaaaatatgaaccttaggatcctta gggtcctcaggatATTGCGAGGATATCCTCAGGATCCTCAATTTTATTTC GATCCTTATTTTAcgtcaattatttttcattaaagaAAGTGAATCTTAGG ATCCTTAGGATCCTCAGGCTTTCCCAAGGATATCCTCAGGATCCTCAAAA AAACTAGGGCGATTTAAgatattttgagagaaaaaaactgaggatcctca ggttatcctcgcaaaagcctgatgaccctaaggatcctaaggttcatatt ttgagaaaaaaaaaaaaaaattgaggatcctcaggttatcctcgcaaaag cctgaggaccctaaggatcctaaggttcatattttgagaaaaaagaaata aaaacgaggatcctcaggatatcctcgcaaaagcctgaggaccctaagga tcctaaggttcatattttgagaaaaaagaaataaaaacgaggatcctcag gatatcctcgcaaaagcctgaggaccctatggatcctaaggttcatattt tgagaaaaaaagaagaaaaagtgaggatcctcagtttatcctcgcaaaag cctgaggaccctaaggatcctaaggttcatattttgagaaaaaaagaaaa aaaagtgaggatcctcaggttatcctcgcaaaagcctgaggaccctaagg atcctaaggttcatattttgagaaaaaaagaaaaaaaagtgaggatcctc aggttatcctcgcaaaagcctgaggacccaaaggatcctaaggttcatat tttgagaaaatacaaaaaaaaggtGAGGATATCCTCAGGATCCGGAGgat aaatgttaaaaatccGTGGTTAGctcgattgacttcgatcgacTTCGATT TATATTTCCTTTCGAGCCTAAAGGTTGGTCTCCACtagcgcgcgctgcga tcgcaactTTTTGCTTTGAGAAAAACACAGCGCGCGCTTGCTTTTCAAGC GAGTCATCGTTACGTCAGATCACGCCAATGGAATGGCTTCATTTTTTtat gaccaatagcgtggaagctttgctcaaagaagagctatcgcagcgcgtgc aagtggagaccgacctTAAGGCACAAAGGAGACAGTGAAATTATTTGCCG CAAGAAAGTTACGACGGTAACGACAAGCAAGTCGATCGAAGTCGATCGAA GTCgatcaaaaagaggaaaaaaatgtaaatcttcGATCGACTTCAATCGA TTCGACCGATCACTTCGATcgacttcgattgacttcgatcgattcgacaa tcgaatttttcgattgacatcccctggtaaatagtaaactgcatactgat acagtctgctagacatttataaggtaatatttgctcttcatctttgatgc tttctacagtgattaggttgacacatgcgcgataaaatttctattattgg tattattggttaatatattctttgaaaacttaacctctgatactcagggt acatgttacttgctttataacttacagctgataactttattagtgtcaat aaattcgaaccaatcaaaaataaatgtcatgtagcAAGCTCAtaaaaatt ttgagtaaaaacgTGATCTGTCtttagactttaattttgcaacctgtgtc tTACTAGTCACTTTTAGTGCCTTCCATTCAATGAAATTGAGCTCTGAATA CACCCATGTCTCGCTGTCCCGGggcaacttttttcttcagtggggataaa aatccctattgaaatcccgatggggatagaaattctatcgtaccaaggtt aaaaaatccattgtggatggtttttgagtgcaattttcaagcattgaatt tcgagtggggatgaaatcaactTGAAtgtcccagtggggctgaaattcca gggtattttcctatcggggacaaaattttccagtgggccGGGGTATTAGC AGATCTGTGACATAGGGGTGTCTGAATTTATACTACTCAGCGAAGCAATG GTAAAATAAcacttttgaatatcttttcaatcaaaaacaTTGATCACCGA TCATTTTGTGTACTGTTGAAACCCATCAACTATTAAGGCCTCCTTATTTT TTCAATCgttgtctttttataagaacaaactgtataagaacataaagctt ccgAGGctctttgcggactctaaaagcACCCGATTTTCTTTGGAAATAGG ACAAAGATttgttatgttcttataaaaaacgtgtaaatctGCAAAATTGA GAACGTCTGGTTATTGGTTGAAAGCCTTTGATTCATCACTTTGCTCTTTA CCAtaatgttttaaagtttaagGTTTGTGACAACAAATGGCAGCTTTTTA AGTTGTAACAAAAAATGTGTTCATCTTATTTTTTAGGGGTGATGATTCAG CTCTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAACATAAAAACTGT AGAAATCAGGCTGAAGATATGTGACAACAACGAAATCGGCGGTGAGAGGG GTTTGAGAACCAGACGATTCAAGCATCGGCCAAGTATGATTCTTCTCTGG TACAAAACATGTTTCAATGTTTATCAGACGCCATTGGGGCATATGGAAAT TAGATAAGCGTTATTTCTTCATAAGCTATGGGGCATAAGCAAATATCAGA AATAAGAAAAACTATTCGAAACAATGGAACGGATATGGCTACTGTATTAC TTGGTATGATATTtacatcaaaaattgaaagtgTTTGGAGATATTATGAT GAGAAACTGCTGGTGTAGCAAAACTATCGAGAAATTTCTAATAAATTTct aataaattaaaataaattaaatttctagGACATTCCTGCATATATTTGTA AATAGCTTATTtactttaatttatttatttgtatttcgtttttttcaaac aaagattGTGTAGAAAATTTAAAACTCAAGCCTCGCTTGTCTGAATCAAA GACATCTACTAAGCCACAGATAGTAATAAACACGAAATCATCATAGAGGC ATACCATCAGGCTAATGCCTCacagaaaactttttaattttaacaaatta cagtggaacctctaattagcggacaccatcggggaaaggggttagtgccC GCTAATTAGTGTCTatgccttttagaaacttttgatcttggagctccaat tttgaaattaggccatcccagggtgtcgaaaatacaaaattggtgtctaa agtacttatctgcagacactaggccatagaaggacaagagaaagattatt aaaacgcaacaatttagtttttaataaataaaagaaaatcagtgatttat gatttctttggcccacctaaattcgttgaatgggtcaagg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062326TCONS_00062326Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062326-proteinTCONS_00062326-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:57442..67031 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.48 0.51 0.65 0.61 0.32 0.14 1.94 1.81 3.17 2.67 1.22 2.25 6.61 4.41 3.09 3.34 2.3 3.02 7.18 9.43 4.79 4.89 1.94 3.07 3.59 4.36 4.99 3.9 0.75 0.85