XLOC_039088 (gene) - C. hemisphaerica

Overview
NameXLOC_039088
Unique NameXLOC_039088
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:160245..163451+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039088 ID=XLOC_039088|Name=XLOC_039088|organism=Clytia hemisphaerica|type=gene|length=3207bp|location=Sequence derived from alignment at scaffold_364:160245..163451+ (Clytia hemisphaerica)
TGAATAGGCTTTTAGATATGAGTTCATTTACTCTAAAATCAGTTGTCACT GGTCGAAGAAAAATAATCATTACAGTTTTTTCTGTCTGTCATATGGTAGA GTGGAGTTGGTTGTGAAAAGACAATCTTTTCTCGTCAAACGGTATGTTAC TTTCAGTTCTAATACTTCGGTTTTGTGtccttatgttcttaacttaCTTT TGCATTTTATAAGTCTGTCTCTCTATTGtacggaagccgagaagggacat ccaaactttctttttttgtcgactttttttctttttttgccgactttttt tctttttttgctgactttttttctttttttgtcaactttttttctttttt tgaaaactttttttcattttttgcggacttttttctttttttgaaaactt tttttctttttttgcggacttttttctattttttttttaaaaaaggtttt ttttttaatttaactttacTTTTCGAGACTGCTTTTCGACGagggcaaat tttttatattatgctGCTAATAAATAAAGTGTAGAGTTAACAAGAAAAAA TTgtccttcgaatctcctgcagttttcgagtgaatcgatttttagttaat caatagaacttatcaaaagtcccccccccccttaNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAAACATAACAAACCATGCCATTTTTAAAC CCGggggttttttgaaaaaaagaaaaaaaagtccgcaaaaaaagaaaaaa agtccgcaaaaaaagaaaaaatgtcggcaaaaaaagaaaaaaagtcttca aatcaaaaaaagaaaaaaagtccgcaaaaaaagaaaaaaagtcagtaaaa aaagaaaaaaagtcagcaaaaaaagtaaaaaagtcggcaaaaaaagaaaa aaagtcagcaaaaaaagaaaaaatgtcggcaaaaaaagaaaaaaagtcga caaaaaagaaagtttggatgtcccttctcggcttccgtaCTATTGACTAA TCTTTTACTGTCTTTGCTTGCAATTAAGAGACACCCCCTTCTTTTAGACG CCCCTCGAAAAAACACCCCTCCTTTAAGGAAAAATCAATAAAGAACGCCC CTCAACTAAACGCCCCTTCGAATAAACGGCTCCCCTCCAGGAGGGACGCC TATTTGAAATAAGTAGCTGTAAATACTATGCTGTAAGCCCTAAGACAGTA TAATATAAAGGAAAACTTAGATATACCATAGATGTATCCTTTTAGTATTC ATTATGATTTTGACCCTTTTCTACAGCCCTAAATTGATATATTTTTACTC AAATAATAATGAGAAGACAAAATAAGGTTCCAATTCACAATGGTAAAGTG GCCTCGGTTATTTGATAAACgccccttcgaataaacgccccttttaaaaa caaaaaatttattaaacGCNAAAGTGGCCTCggttatttaataaacgccc cctcgaataaacgccccttttaaaaacaaaaaatttattgaaCAACCGGG GCGTTTCGGTAAATGTTATTTTCTGATTAttcttttgatagatttccaaG TTTTCGCTACAAAATGGCGTCTGAATCCGTTGATGTGCCTGAAGTTCAGG AGTTGCAGAATGAAATACGAATAATGAAACATGATTTCGAAGACCAGATA AAAGAGAtaaaagaaaaccttttgaaaGTTGTGCAAGGAAAAGTTGACGG CCATGAGAAATGGATTCGTCGAATTGAGTCTGATGCTGATACTAAGGAAT CAAAGTTCCACGAGGAAATGAAACTAAAGGAAAAGCAGCTCCAGGAACTG AAAGCGGAACTAGCCGAAACTAAAGAGGAAACGAAGAAACATCTGATGGA GACGGAGAAAATGCAAACGGAACTCGcggaaatcaaaaaagaaatgaaaa aacaggAAACGGAAAAAGAGAAACAGATTAAAGAATTAAGAACGAATTTG ACGGAGtgtgaagaaaaaatgaaggaaatgcGAACGGAACATGAGGAAAA ACACAAAAGTTTGTTGGAAGAACTTCAAGTGAAAGATACgcgaattttca ttttggaaGAGAAAATAAATGAGGTCGAGGAACACGGAAAGGGAAACGAA AAAGAGATCGGAAAACTTGCATCCGAAATGAATATGAAAGCTGAGAAGCT GATCGAGTTGGAATCAAGAATGAACGaacaaaaagagaaatataTCCAAC TGTATTATCAAATTGGTGAGAAAGGTGAAAAAATATCACAAGTCGAAGAA ATGTTATGGAAAAAATCGGGCGAAATTTCGGAAGTGATGCACATTGATCG GGAAACAAGTGAACGACAATTCGGGGAAATCATGTTCAAGTTGAATGAAG GTAAAAAGCTGACGCAAAGTGTCCTCACCGAgaaccgttgtccgttcgtt tGGGAAGTAACCAATTTTAAGAAGGAATTTGCTGAATCGAAAGCAGAAAA TAAAGCTATCATCACACCTGTGTTTTATTGTTTGAATGGATATAAAGGTC GCTTACAGATATATTTGAATGGCACTCGAGAATGCAAAGATTCGTTCATT TCAGTTTTCTTTGATCTGGTCGAGGGGCCTTTTGATGACACGTTAGCCTG GCCGTTGCCTTATGAGAAATTCATCATCACACTCACCATAAACAATAAAC AAGTGACGTCAAAAGCCATAGAAAGCACATTTTACGGGGGTATAGCGGGG GAAGCTTACATTCGACCAACCAAGAAAGTGACCCCTGGTATAGGACCACG CAACTTTTTATCGCACAAAGACTTGCCAAATAACATCAAGAATGATACAT TGACatttaaatttgatattcaaTAATTCATTTTACTTTCGTTCTCCTGA CCTAATCCAAGTTACCTGGTCATTCAATTAAATTGGAACTAACAGCTATT CAGATTCATGGTATTGTGTTTTCAATATTATGTCATTACCTAGGTCGAGA GTGTTGTCACTAAAATTCATTCACTAATTTTGTCTTGAGGCGAAAAATTC TACGGGATACCTTATAGATGCTGTAACTTTCGATGCAAGTATTTTATGAG AAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062377TCONS_00062377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062377-proteinTCONS_00062377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:160245..163451 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.27 0.19 1.03 1.14 0.03 0.03 0.13 0.03 0.06 0.03 0.17 0.13 4.14 3.08 0.21 0.09 0.09 0.79 8.1 5.53 0.05 0 0.14 0.18 0.08 0.02 0 0 0.05 0.11