XLOC_039384 (gene) - C. hemisphaerica

Overview
NameXLOC_039384
Unique NameXLOC_039384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_373:46590..57618+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039384 ID=XLOC_039384|Name=XLOC_039384|organism=Clytia hemisphaerica|type=gene|length=11029bp|location=Sequence derived from alignment at scaffold_373:46590..57618+ (Clytia hemisphaerica)
attttccacaTACCGCATACTTAATAAAACGAACTGGTAAGGCTTGTACT CATTTAAATGAATTTGTCATGGTATTATTGTGTCTACCCTGGTCAAAATT CTTAATAAGGTCTTGGAAGAACTTTCAAGATCTTAGTAAGATCTTGACAA GATTCTTGGAAGACTTAATAAGATCTTGTAAGAATCTTGCCAAGATCTTG CTAAATTCACGTACGTTCTTGCAAGAAATTGCAAGATCTTACATGAAAGG AAGCAATATCATCAAGAATCTTGGATGATTAGGTAAGATCTTACAAGCAA AAAATTGAAGTAACGAAACTTGAGTGATACCTCAGATTCAGAAAGAGAGT AAAGAGGGGCTAGATGTTTTATACCAGCTGAGAGTTGTCAATTCAAAAGG GCAGATAATCACCGACCAACCGGAGGAACAATCGACTGTGGTTAATAAGT GGATGGACGGCAGACGataatattgactttaattGCCTCAAAGTCTGATT AATGAAGTCTGTGTATCTTCGAATAAGGTCAATATTCCGGTCAATATCAT GTTTGAAGAAAGCTTCTGACAGTGTTTTGCTTTTTCGTTTTTCTGAAGAG TTTCATTACCTTCGTCTTCTCATTCAATGATAGCCCCCCTTGATAGGTGT CTTCTTAAAGCAGAATTCAAAATTGAAGAATGGAATGGTTGAAAGCTGAT CACGAGGTTACAAATATGTTTATAATGATCTTTTATCGGCTATTAATAGG TATCACCAATTACCCCTAACCAAATTTTCTCAAGAAATCGAACTAAAATA GGCTTTTGATTTGCGAGTAATGATTTATAAACAATATGTTGAGATATGAG TTGATAATGAATTATGTGTTCTGAagaacgtcagaaaaaaaacattacgc GCTGGATGTGAAGAGATAAGTAGCTCATCATTCGTAAAGCTATGTTGGCT TAGCAGAAAAAATAAGTTGAGAGAAAAAGGAAGGAAGTCACGAGGGAAGT GATTGTATTAGCAGTGTTAACGATTTATTTTCTGTACAGTGGTCCCACGA CTGGTTCTCTGCTCTCGATTGTGAATTCATCAGACTCATATGTTGCATTT TGAATTGACTTTTGATCGTTTGGGATGTTTAAATAAACTCATGCTGTTTA TGCCTTTACCGGTAAAGTATTCTATCGTGGAtaatcttaactttttggga aaaatcatcctaaaatattcttaagttattcttaggttaggaacTAAATG Ggaggggggttgtacttttacggtgtgacgggattggcccttttttagta cggtattacgggatttgacgaaaaaaaagacagGAAAACGgcattttaaa atcagacggtgacggtatttggccttattttttgtcattatgccggtatt tgagcctgtacaaaccggtgtgacggtgttgttatttttttcaattttcg ggattccggaattcagcaaaaattttgacgggaaaacggtatttcgaacc cctacaaaccccccctaAATCCCAACTAAATTTAACATAAATAATACACC TGAgacataaaatgacatttttaattATATTGAGCTTTGCTGGGGGATGA TTGGCAATTTACagttgaaaatgctctaaaaatggcatccTTAGGTTctg tagcaaaattccatgatggtgatattcttagcatattctttattttttga cattaagttcatcatgaacattcttataaagtatattcttataaaaagac gtgAAGGCTGTAGAATTATCTTCTGTAGAAGAATAAGTGCTTGTTGTTCC AAGTTCAAATTAATTGTTTGTTTATCATTCttaagtggaaaattatacgT TTCTTTGAGAATGTAAAAGGGTAGGAGTAGTCTCCAAGCGTGTTTTGGCA ACCGTTGTCGTTATCTTTAGAGTAAgatctttctttaaaaaagttatCGA AACTGGAAAGTTTGCAAAGTGTGATAGATTCTGGTCTCATAATAGAACAA CTTTAAGTTATACCCTGGGGGTAAGAAATATTTACAAGGGGGTCAAATGA CATCCTCTATTGGTTGGCACAGGTTACTAAATATGTTATGCTCATCTAGA ATCAGCATGTGAAGctgaaatcgctaaaatagcttGTAATGAACGGAAGC TTTAACCCATTTGAAAGTCTCTTAAGCCTGGGATAATTATTCAATTAGTT CCATGGATTAACATCAAAACTTCAAATtgtatttttctaaaaacagCATT TGGCAGACGTGAACTTGATGGGAGATTTTAGGTAGCACACAAGTTGCTTA GAGAACTTTAGTTTGATTGGGGACGATCATGTCAGATGCCATGTCAAAAA TGCATTTTCAAGAAAGGGCTTCTTTAGATAGACTTGCCGAattaactaca cgttttttttttattagaacctagtttataagaacattgaagCTGAAATT CNGTAGACTTGCGGAattaactacacgtttttttttaattagaacctagt ttataagaacattgaggctgaaattcgtcgaaaaattaagaacatcgtaa gaacatgcccagcctcagttttgaaagaaatgacaagaaactacaatttt ttcctcttttcaagcatttttaattgaacttagggatggattttctaaaa tcgagagtcaaatattgtccaaattttaaccctattagccccaagctttt ttgacttttgtatccccaggggggggtagaatctaccaccctcgattatt ttcgatctagaagagctatggccatgaaatttggtacagatgttctccat catgagacaattttccaggaagaaaaaaaaatttgattacgtcattcaaa aactgatgacgtcatcataaaatttccacctgtcggaaaaaagcccaaat atatggtttacaaaaatgtctattacaatcgaaccaataaagatatttca attctgtttgaagattctgaaagataaaagactggtctttaacataattg ccggttttgcacaTTCCATGAAGAGTTTtccttaaaatctatgctgaaga tgagtaaaattttcaaaattcgatgacgtcataaatgatgacgtcatcgt tttcaaaaaattttttttgattttttaaatttgtattatcaatgcctatc acgtgtcaaatattgtccaaattttagccctattagccccaagctttttt gacttttgtatccccagggggggggtagaatctacccccctcgattattt tcgatctagaagagctatggccatgaaatttggtacagatgttctccatc atgagacaattttccaggaagaaaaaaaaatttgattacgtcattcaaaa actgatgacgtcatcataaaatttccacctgtcggaaaaaagcccaaata tatggtttacaaaaatgtctattacaatcgaaccaataaagatatttcaa ttctgtttgaagattctgaaagataaaagactggtctttaacataattgc cggttttgcacattccatgaagagtttttcttaaaatctatgctgaagat gagtaaaattttcaaaatttgatgacgtcataaatgatgacgtcatcatt ttcaaaaaattttttttgattttttaaatttgtattatcaatgcctatca cgtgtcaaaatttgaaaatgattgaataaatagtttagaagttatcagca atttaaaattttgagttttaagcgatttaagctgggttttatgtcatgtt tcacaataaagtcataaaacctgatctggacaaactatgaccctaaaatt ttgcacaagtactcttaataagattttagtaaaagtcagaaagtttcaag tcgtttgaaaaatttttctccgagatataaacaaaagaactccagcgtgg tagattctacccccccctggggctaatagggttaaatgctctttattttg catgaaattgtcgatttagaggagtctgaaaaattatgaacacatttaag aacattttaggctgaaaattgctaaaaaataagcacatccaggctcagcc aaattttaggtgttctaataaaaaaaaacgtgtagtggNggagtctgaaa aattaagaacgcatttaagaacattttaggctgaaaaattgctaaaaaat aagcacatccaggctcagccaaattttaggtgttctaataaaaaaaacgt gtagtggaCTTTGACCATTGAAGTCTAGACCAAGGAAAGGAGGGGAATAT GGTAAATGCTGCTTCTTTTTGTTTCATCACAACCGAAGCCTCGTGTTTGA AAGAAGATGATCTTCTCACGCTGTTGGATTCTCCCTCATTGAAACAATGT TTCATTTTCACAccatttcattttcctttggtAACACTAGAGGGATTACA CATTGTACAGATTATCTTTGTGTTGCAGTGTGACCGACACAAAAGACCTC TTCTTCATATTTCTTTCATCTCAGTCTGAGAGAAATAAATATCCCTTGAA TTAAAATGAATTAATGGgaaatgaagaattttgaaaaGGGTGATATAAAG AAGGAGTCCCAGCAGGTGGCCACAAACTTCCCCATTCTTCCCATCCTTTT GTTCTTCATTtccaaacaaagaaaattccttttttcatttcttttgtccC TCCCATACATTCCCATTCTTTGgtctttcttcttcattttcatttgcatt GAGAGGAAGATTTCGTGACGTCACACACAAAAAGAATCCCAGAAAATTGt gttgtttgtttgaaaaatttgaatgagaatgaaatattattaaaagaaat tttatgaGATAAAAATCTTGTGTTAAAAATTTCCTATCATTTCATAATCT ATTTGTGAGTATTTGAGGAGatgaaaatttttggttttagaATTATCACC TTTTCTTTGCTAAAGCCTTCCTGGATTTTAAATTTAGTTCTCTATGTAAT GAATGTCTCTTGATTGTGGTTATGTTGATATGAACCAATGTTTGACGGAT GAGGAATATAAGTCGTTGAGAGGGAGTTAAATATTTAGCTGATCGCTAAG GGGAACACCTGAGTTCTTATGTATtcagtcaaaacaaagaaaaatatttc acaataTGGAATATATTCGAATTTAAGCATTTTTATGTTCTTTTAATCGA ACAATTTTGCTCTAAAGAACATGGCAGATTATCTTGAATATTTCATTTCG CGTGGAAGTTTTCAACTTCACTTTGAGACTCAAATTTCAATTATAGAGTG GTTGTTGAGCTTCAAAGTTTTGTCTTTCGAAAGACATGGGCGGTAGAAAG TTCAGTGTAAATTTTGTAGTTCGGCACTTTTAGAGTAGTTTCTTCACCGG TACGATTTTCAGATGGTGATAGGGCCCAGGTCACACAAGACAGGAAACCC GCCTATCAGTTCACTGcgaaaatctctaaaatgtcgGATTCCTTGTTCAG CAAATATTCagaaatcattttttattttggatgttacaggaaaaaaagaa aaagtttagacAGTGTCTCCTAGCTTAGGTCACACCGGGTCCCGAGCGGT TATAAAGGACAAATATAGTCCCTTTTTTATGGGAAATCGGTTTGGCTTGT TTTCCGGTATGACGTCATTGGGTAATGCTGATGAACTTTAATATGAAGCG CTTATTAAAATTCGGTCAATTAAAGTCCATTAATTCTGATTAGCATCTTA ATGATAAAAAAGAACTCGTGATAGATAGAAATGTTTAATTATTTCAGCAT TTATCCATTTAATGCTAAGCCGGCATTCAGATTTCAATTAAAAGCGATAA AAAGGAAAGCATGGGCGTTCATTACTTCGTTTCAAAGTTTTATACTCATT GGTGTGTAGTATGTACATCTGAATTAATTGAGCTGGAAGTCATTAAAAAA AGCTCATTGAAACTTTCGTAAACCGTTACGCTGAAGGAGTAAATAGATTG CTTGTTTGTGATTGAACTAATTTGCTTTACATTTGTACAAAGTCATTTAA TTGCTGTCAAAGCAAATCGGACAAGCTTTCTTTCACTTTACTAGACTCTA TTACGCACTGGGTTCACTGGGAAGTTGACGCAGCTTGTCAGACGCGGTCG TACGGTGTGTAAGATGAGAGTTTTTGGAGAGAACGTAATATCATGCTGTT TAAGTCTGACTTCTTTTAAAAGTTGTGGTTTGTGGACATTTTAATCGATA ACAGtctcttttgctttttatataaaTAGTATATCTTTATTCCAATAATA CTAATTAAGAAAGATTAAGATCAGTAGGCTAAAAGAATTCCAGGCTTTTC GCAATCAATAACTTGTTTTCGACTTACTCTCTATTGAGCTACAAAGATAC GACTTCAAAATTTGGACAGCTTTTGACGCCAGCTTGTTAATCAGATTGCT TGAATCTTGAAAAACAAAGTGACATCAGTATTCTGGCATTTCTCAAGACT TTTGATACTGATAATGAAATTCCTTTTGGAATGCTTTTAATTCAGAGATT CTCTTCAAATGTCAAAACTCGTATACTTTCATATTCCAGTGGCTTCATTG GCTACGTTGTTACTTGACATGGCGTTTTGAGTGTTGTATGGAGATATGGT TTCTTATCTTTAGATTCAACGCCCATACGCCCAAACTTGGGGGCGGGGAA GCTGGAAAAGGAGAAACTTGAGGTCACCGAGCTCACGTTTCTAGCGATTG CAGGGGGAGGGGTCTATAATATCTCCAATAGTGAAATTTGTACTTAGGAT TTCAGATAATCAAACAATGGTTATTTGGAAAATAGAATTAGTTATTGTAT TGTGTATTCTTACCACGAAAAGGGAGCATGTGTTTGGCTTCTGTTTTGCA GAGTGTTTCCTCCCCTTCTATGTCGTCAATGGGAACGGTTGAGTGAACAC ATGGCTCTTTCTGTTTACCAAAAGCCAAAATCTCGCTCACTGTATGTGTA GACATCTCCCTCCATCCGCTTGTCTAAAAAACGAAAATAACAGAAACGTA TAAGTGGCTGAGCAAGAAAAGGAAGGGCGGATGAGTTCAGTTTCTTTGCA AATAGAAAAccagaaaaatttccaaatacTTTTTGAGAGAATTGTTTTGG TGTACGGTTGTGTGTGGTATGATATCGGAGGATGTTTGGATGCGTGGTGG ATGTTCTACTGTTTTATTGAGTGAGTTAAATGTTCAGTAACGCTGTAGGT TGGATTTACTCCAGgatctgatttttttgcatttgatAATCTGATGGTAA CAAAGCACCATGCAATAAATCAGAGAGCGGATATACTAACAGAGTCTGAC CACTACAGTATTGTAAGTtggattttcaacgttttctcTAGTTTATCGCT TTCTTCCGATAGCCTTGTCGGGGTCTTTTCGTGAGGAAACATACTAAGTT TAAATACAAGATGCGAaaattatttattcaaaataaccGAAGGGAAACTG ATAAACATGTCAAATGTCTCCCAAATATTTTATGATCAATCGatataaaa agaatttttcaaagaaaatgaacatcaaattttgatgatgatTCCGTTAG AAAGTATATAATGTCTTCACGAAGAATCGAGAAACGAAAAAGAGGATAAC TCTTTCTTCATCTTCGTTGAGACAGACGGTCTTCAAACTTTTTGGTTTTC CGCCGAAAATTGATAAACTATAAAAGAAGGGGCTTTCTTGGACGTACTTG AGACATTCATTCATTCGGGATTTCTTTTTGATGCTCGGCTTTGATGAAGT TTTATGGGCAGGAAAAAGAATCTAAACACTTTTTTATTAAgaatatattt ttatcaaagctTCTATGAATCACTCATTTTTATTTGACCGTAGAACGTCT TCAGTCTGTTGGCTTTTGGAAGAAATCTACTGTGGTAAGCGGACGTCATT GGGAGAAAAACATGTTTGTCAGTCAAACCAAAGTTACAAATCGGTTAAAA TATCATGCTCTTGTGAGAAAATATCAGCGGCCTTAATTCCAATATATAAT TAAATGATCCTAAGAGTTTTTACCGAGAAATTCCAGCAGTGATAGATGGG AAAATTCAACTTTGACAAAGATCAACTATTTCAATCTGACGTTTTCCGGG AAAAACTTTAAAAGCAGTGATATCAGCAAAATGATTCGTCTTTTGCAcgt gaaagtgaaattttcccACAATTTTGAGAGAGCTTAGAGTGTCGATAGAT TGAAGTATGTTGGCAAGAGATATCCAATTGCTTTTTGTGGTCATATCTCA ACAAGGCGAGAATAAATAGATCACAAAAATCCAATTGCTCATAAAAATAA cctagaaaagtttttttaaagctATCCTACGTACGTGTATATATGACCTA AAAGTAAAAATGTCTATCAAGCTTTGGTGGTAGGAAGACAGGTTTGAGAA ATGTGTAGGTAAGTCTCTAAAATCTGTTCAGGTagataaaacaaaattta aacgaCTGCaacgttttttttgttttatggtAGCGTCGTCAGATACGAGG ACGTCATCAAAACATGTTTAGAGCACGTTGTTTTTTACGAATATTTACTT TGTGATCTTACCAGCATATATTATGGCAAACAACTTTTCTTTGGAGCGCA AAAGCCTGATCGTAAACATAACAAGCCATCTCCACATTTCGTGTTTGGAA GATCAGTGGGAGATCACTAACATCATCTCGTGTGTTTAAGGGGTGAGTTT GGGCGTCGTACTTGTGGTTAGACAagagacccgtcgtgtgtttttttata atttgatgtacacaagacgggtctgagctgtgagtccaatattggactca cattttttacagtgggaaattcgaatttagcgctgtcctcacttactaaa ataaaaaccaaatttcgaaagttgcNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNttattaggatctgagaaattcaaactctcaacccataccatgc tatacatttcgccatcagtttatcaaagaagaaatcatagcatggattcc caggctaacttGTGGTAGGCTCCCTTTCTTGTTCAGTCTATaaaagaaat attcgaaaacaatgttttcaaaTACAACGATATGTTTTCAACGGTTAGGG TGGAAAAAGGGTGGTAAAAAGGCGTTAGTTTGGTAATTTGGGGCGATATT CTTTACAGGTCAAATTTCTAAACGTTTGATATCCTGCTGAAGGGGAAAGC TGACGAGTTTTAATAGTTGAATTAAAAACATACAAAATGACTATGTCACA GTTATACAAATAATAAAAAGGTACTAAGCTTTAAAGCCCTGTCAAGAAAT TATGAGTGtcaaaattatttaaatgtCAATTTAacctttcattttctctt tatcttttccagaagaaaatcattaaaattggAATAATTTGAGACtttgg tgggcattgctatctcCAGGTGGAATACgtcaaaagaaattcaagatAAA TTTTATCACTTCACAAGATAAAGTTTGCTTTCAAAAACAACATTGACATC CAGTGAGAAAGGAAACCCCCTGAAACCGACTTCAGATTACTCATAAACTA CTGTAAAACAGGATATCTCGCCGGAGGTCATATTTGCGGTCAAGAAGAGA TCTTTATATGTGTATTTGATGAAGCTTTTGATGACGACTGGCAGAATGTT TGAGGAGTAGTTTGTTCTTTGAGTCAACTTATTTGGAAGGCATTCTACAT CACGTCATATGTGGAGAGTATAACTACGAGATTAACTGAGAGAGAGAACT TATTGATTTTACAATTGACTTGAACATAACAACACGTGCTTGAAACAAGA TGGCTTCCAAATCAATGCCGGCCACAGAATTTGAAGTTTACGTTTCATCG GCCGATAGTGGTATCGATTCTGACAGTGCTTCTATTGCCAAACTGAATTC CTCCTTAGAAAGTATCGAACAGCGAAATGAGATCGATCCAACAACACTTC TGGCTGATAAAAACGCCCCACATAATGAAAGAGTGGAGGGGATCGGAAAA GCTTTAGATTGGCTGCGCGATGAACTCACTAAAATGAAGGAAACGGATAA AAAGTTGACGAAAAGGTTCATAAAAATGCGATCACGGATAGCCGACCATA AGGAGTTCATAGAGAACGGAGGTTTGTTAGCGGTCGAACAGCCCATCCTC CTTGAAACAACAACAGACGATTGTACGTCAGAACTTATGAGAAGAAAAAT GTCGCAAAAACGACCTGATTATAATTTGATTGCTAAAGATGGTGCATTTC CGACACATGGGCTAAACTTTGAGAATAACAAACGTGCGACGTGGGTTATA TAAAGACTGGTACCAAGTTGTAGTAAAAGAAGAGTTACTGAAGTCAATTT TTGATGGACGGATTTGTCAGAAAGCTTCGTTTCATGATCGCCGCTCAGCG TAAACATTGAAATGTAATTCCATAGAACAAAAGTGCGGAACGATGAAATG TTGATTTGACCTTAACATATCTCATAACGGAATGAACTGCTTTCGAAAGA CTCTTATGTGGATTACAATCTCAAAAACATGTTTCTTTGATTTCGAAAAC GTGAAATCTTTGATTATTACACTGATCTGTTTTGTTTGTAAGCTAAGAGA TTTAGTTAGGATTGAGCTACGTAATGTAAATTTTCAGCTCACGGCTGCAG AGTACCTTTTCAATCTCAGGATCCCAACTCGAACTATACCCTTTAAAGCT TGAAAACAGTTTATTTAATAACCAAAATTTTTAAGTCGTGTTGAACTTAT TTTAAAAATGAtatatattttgtaaaaattgtagttttgttaaatagtaa agtaaatatTCATTTTGGACCATAGGCATTATCGCAAAGGATATTTAAAG AGAAAATCAAGATGATAATGAATCAAccg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062874TCONS_00062874Clytia hemisphaericatranscript
TCONS_00062875TCONS_00062875Clytia hemisphaericatranscript
TCONS_00062876TCONS_00062876Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062875-proteinTCONS_00062875-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_373supercontigscaffold_373:46590..57618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.61 0.7 0.15 0.04 6.05 5.43 45.34 45.69 15.68 17.55 13.37 19.98 22 19.6 20.21 21.8 17.85 27.87 28.21 35.44 23.97 22.45 14.62 17.5 29.22 29.09 10.53 7.61 3.66 4.57