XLOC_039524 (gene) - C. hemisphaerica

Overview
NameXLOC_039524
Unique NameXLOC_039524
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_38:120960..123310-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039524 ID=XLOC_039524|Name=XLOC_039524|organism=Clytia hemisphaerica|type=gene|length=2351bp|location=Sequence derived from alignment at scaffold_38:120960..123310- (Clytia hemisphaerica)
GGGAATTAAAAGAGGCGGATATTAAATATTATGAAATGAGAAAAGAGTTT
TAACTTAACCAGCCAGATGCACACATGGACATAACTTAACCTAATCCGTA
TAAAACCCAAGGTAGGTTCCTTCCAAAATAATCAAACACAAATCTTCATA
AAGTAGAACGAAGACTTGTAGACCTTGAAGAAGAAGATATGGATTCATCA
TATTTGTTACTGACTGGCTGTTTGTTGGCTTTTATGCAGTGTAAGCATTT
TTATTGATCTTAATTTGTTATTATGTGTATTCTCATTATTAGCTTTGTTC
AGGCCCGGTGGAACCGGGGAGACTGGGGAGACTTCAGCCTCCCCACTTTT
GAGCAAATGAGATTTTCTTTCTCAAATTCCTAGCAGTTTTTAACTCATTT
TGAGCTTTCACCCTCCCCACTTTTATGATTGTTCTGCCGGGCCTGTCGTT
GGGGGTGTCTATCTTAGGTAGAGCCTGTGCCCTGTGATAATATAATGCTT
ATGTATGTCTGCCTTTCGTTTTCCATTCTCAATCAAACAAGAAATCTAAA
AATCCAATAAACTACGTCTTGCCAAAGTTATCAAAGTTTTCTTTCTATAT
TCCATTTTCAGCTAATGTGAATGCTTTTGATGATTTTTGAACACGTCTTG
TGCTTTTAGTTACTTCCTCCGCAAGCCTACATACAAACAATGGTGTTGTG
AACATGGAAAATTTCGAGCTTCAAGATAGTATCAGCGATGAATCCAATCT
CGAAACTCGACGAGGTATACGACCAGCAAATTTTAGCTGTTGTTAATTTA
TTACAAAACTTTTTTGTTTTTACGAGTTTTGATCGGTTTTAAGTTGTAAC
TTTTCGTAATTAATCACCCATTTACTTTACAAAGGGCTTATGATGCGTTT
AGCTTAACCTGTTACGGCAGGTGCGACGCCGAGTCACGGCTAGTTTATTA
CTGACAACAAATTCTTTAGCAACTTTTGGAACGATACAAAACGGTCTACG
GTCGTTATAATCTTGCCAAGACTTATCCGTTCTTTTAATTCGAGTTTGTA
TACAAGCTGGTAAATCAAAAATCCAAATTTTTCATCTGGGCCCTTGTATT
AGTTTATTTAAAATACAAAAGACTAGGCTGCTGGCATCCACTAACGGATT
CGTGCTCCTTTTAGTACCTATATTATACTACCGTGGGGTTTTGTAGACGT
CTGCGATTCAGATTAACAAAAGGCTGAATTAGTGGCTAAACGCAAATTTC
ACAGATCTGGGCATTCTTCAATTGGGCTATTCCAGAAATAGTCTGTACCC
CCTATGTTGAGGAAGTGTGACGTCCAGGGTGGTCTGGAAAATAAAAAATC
CAGGGTGGTCTAGTTTTTTGGATGTAAAAGTCCGGGGTGGTCAGTAAAAT
GAGGTTGAAAATCCAGGGTGTTCAGTAAAACGAGGACAATAATCTAGGGA
GTCCTGAAAAATTGAAAATAAAAATCCAGGGGGTCACCTTTTTAAAAAAA
GACCTCCTCAACATAGGGTATACAATTCTTTTCTGGAATAGCCCATTTGG
GAGGAGTGGTTGGTCATCAATTATCCCAAAAAGGAATGGAATGTCTTAAT
GAGCTTATGTAAATAACCATGAATAACGATTATTTTTTTGACAGATTCGT
CTTTGGCAGACTCAAGTGTAAAAGAAGATCACCACCCTATCTCTACTAAA
ATGTTTTTCAAGCAGCGCTACGTCAAATGTAAACGCACCTATAATGGCCG
TCGAATATGTCGTCGATGTACACCGACATGTTATCGATCATGCCGTGATG
ACGGAGTTTGTGGAAAACCATACTGTCGTGATAGATGTGTAGTGATCAAA
GGATAGATTTATATATTTACTTAAATGTTTTAGGATCTTTTGTGAATTTG
TATCATATACTGTTTTGTGTAAATTTACCGTCCAAGTTACAGCCACTGTC
CACATAACACCCCTGTCTCAGTGCCCCGGTAGAACTTTTTCCCTCAGTGT
AGACTAGTAAACCACGTCGTTGTATTTCGCTGCAGATTAAACTTGCAATG
GGATCTATTTCTATATATGTTCACTGAATACATGTCTTTCCAATCCACTC
TCCCGCGGCAATTTCTATTTTTTATAAGAACTCTTTATTATAAGCACTAT
TCCCGCGTTGCTGTGTCCAACGAAAGACAGACGCTTGCTAGTCTACCCTC
AGTGGGGATGAAAATTTCTATCAAAATGCCAATGGGCATAGAAAATCTAT
TGTTTCCAGCTCGAAAATTCCAGTGGGGATGGTTTTGGAGTGCAATTTTT
TACATTCAGTTTTCAATGGAGATAAAATCATAGAGCAATTTCGCAGTGGG
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063103TCONS_00063103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063103-proteinTCONS_00063103-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_38supercontigscaffold_38:120960..123310 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42	0.24	0.59	0.59	0.5	0.17	1.1	1.55	2.01	2.37	3.52	1.93	16.62	15.78	18.36	14.31	9.69	10.15	0.42	0.71	1.9	1.97	0.85	1.07	2.76	1.9	0.58	0.07	0.24	0.09